RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 SPG11Q96JI7 2443 aa11.89□□□□□ -0.51
TSC2-206ENST00000439117 FAM223BA6NKX1 122 aa11.89□□□□□ -0.51
TSC2-206ENST00000439117 MSMBP08118 114 aa11.89□□□□□ -0.51
TSC2-206ENST00000439117 FAM223AQ8IWN6 122 aa11.89□□□□□ -0.51
TSC2-206ENST00000439117 FAM120AOSQ5T036 256 aa11.89□□□□□ -0.51
TSC2-206ENST00000439117 RHPN1-AS1Q9BWJ2 59 aa11.89□□□□□ -0.51
TSC2-206ENST00000439117 CHD3Q12873 2000 aaKnown RBP11.89□□□□□ -0.51
TSC2-206ENST00000439117 KIF26AQ9ULI4 1882 aaPredicted RBP11.89□□□□□ -0.51
TSC2-206ENST00000439117 HTN3P15516 51 aa11.89□□□□□ -0.51
TSC2-206ENST00000439117 GATA3P23771 443 aa11.89□□□□□ -0.51
TSC2-206ENST00000439117 ATP6V0E2Q8NHE4 81 aa11.89□□□□□ -0.51
TSC2-206ENST00000439117 C2orf16Q68DN1 1984 aa11.89□□□□□ -0.51
TSC2-206ENST00000439117 IGLV3-1P01715 115 aa11.88□□□□□ -0.51
TSC2-206ENST00000439117 RNF223E7ERA6 249 aa11.88□□□□□ -0.51
TSC2-206ENST00000439117 F8WEM9 126 aa11.88□□□□□ -0.51
TSC2-206ENST00000439117 ZNF493Q6ZR52 646 aa11.88□□□□□ -0.51
TSC2-206ENST00000439117 TRAV26-2A0A0B4J265 109 aa11.88□□□□□ -0.51
TSC2-206ENST00000439117 SS18Q15532 418 aa11.88□□□□□ -0.51
TSC2-206ENST00000439117 NDUFC2O95298 119 aa11.87□□□□□ -0.51
TSC2-206ENST00000439117 UBE2E1P51965 193 aa11.87□□□□□ -0.51
TSC2-206ENST00000439117 FXYD2P54710 66 aa11.87□□□□□ -0.51
TSC2-206ENST00000439117 WT1-ASQ06250 92 aa11.87□□□□□ -0.51
TSC2-206ENST00000439117 ZNF833PQ6ZTB9 187 aa11.87□□□□□ -0.51
TSC2-206ENST00000439117 SRSF2Q01130 221 aaKnown RBP11.87□□□□□ -0.51
TSC2-206ENST00000439117 PIEZO1Q92508 2521 aa11.87□□□□□ -0.51
TSC2-206ENST00000439117 Q8NFD4 153 aa11.87□□□□□ -0.51
TSC2-206ENST00000439117 J3QKU1 62 aa11.86□□□□□ -0.51
TSC2-206ENST00000439117 TCTEX1D4Q5JR98 221 aa11.86□□□□□ -0.51
TSC2-206ENST00000439117 LINC00173Q6ZV60 143 aa11.86□□□□□ -0.51
TSC2-206ENST00000439117 DAZ1Q9NQZ3 744 aaKnown RBP11.86□□□□□ -0.51
TSC2-206ENST00000439117 ARFGEF3Q5TH69 2177 aa11.86□□□□□ -0.51
TSC2-206ENST00000439117 LOXP28300 417 aaPredicted RBP11.86□□□□□ -0.51
TSC2-206ENST00000439117 NSUN5P1Q3KNT7 163 aa11.86□□□□□ -0.51
TSC2-206ENST00000439117 TEX36Q5VZQ5 186 aa11.86□□□□□ -0.51
TSC2-206ENST00000439117 SPRY4Q9C004 299 aa11.86□□□□□ -0.51
TSC2-206ENST00000439117 ZNRD1Q9P1U0 126 aa11.86□□□□□ -0.51
TSC2-206ENST00000439117 IGHV1-69DA0A0B4J2H0 117 aa11.86□□□□□ -0.51
TSC2-206ENST00000439117 CR1LQ2VPA4 569 aa11.86□□□□□ -0.51
TSC2-206ENST00000439117 BAALC-AS2P0C853 105 aa11.85□□□□□ -0.51
TSC2-206ENST00000439117 YLPM1P49750 1951 aaKnown RBP11.85□□□□□ -0.51
TSC2-206ENST00000439117 FAM236AA0A1B0GUQ0 79 aa11.85□□□□□ -0.51
TSC2-206ENST00000439117 FAM236BA0A1B0GV22 79 aa11.85□□□□□ -0.51
TSC2-206ENST00000439117 A0A1W2PNU3 283 aaPredicted RBP11.85□□□□□ -0.51
TSC2-206ENST00000439117 LINC01620Q4KN68 170 aa11.84□□□□□ -0.51
TSC2-206ENST00000439117 DUX4L9Q6RFH8 374 aaPredicted RBP11.84□□□□□ -0.51
TSC2-206ENST00000439117 OTOGLQ3ZCN5 2332 aa11.84□□□□□ -0.51
TSC2-206ENST00000439117 FAM110DQ8TAY7 271 aaPredicted RBP11.84□□□□□ -0.51
TSC2-206ENST00000439117 DSCR8Q96T75 97 aa11.84□□□□□ -0.51
TSC2-206ENST00000439117 C15orf65H3BRN8 121 aa11.83□□□□□ -0.52
TSC2-206ENST00000439117 LINC00311Q8N616 119 aa11.83□□□□□ -0.52
TSC2-206ENST00000439117 A0A0B4J2C4 111 aa11.83□□□□□ -0.52
TSC2-206ENST00000439117 CRLF1O75462 422 aa11.83□□□□□ -0.52
TSC2-206ENST00000439117 C17orf58Q2M2W7 97 aa11.83□□□□□ -0.52
TSC2-206ENST00000439117 PIP4P2Q8N4L2 257 aa11.83□□□□□ -0.52
TSC2-206ENST00000439117 IGHV1-69P01742 117 aa11.82□□□□□ -0.52
TSC2-206ENST00000439117 HERVK_113P63121 156 aa11.82□□□□□ -0.52
TSC2-206ENST00000439117 ASPHD1Q5U4P2 390 aa11.82□□□□□ -0.52
TSC2-206ENST00000439117 RUSC1-AS1Q66K80 236 aa11.82□□□□□ -0.52
TSC2-206ENST00000439117 RHOHQ15669 191 aa11.82□□□□□ -0.52
TSC2-206ENST00000439117 TMEM243Q9BU79 118 aa11.82□□□□□ -0.52
TSC2-206ENST00000439117 PLXNB3Q9ULL4 1909 aa11.82□□□□□ -0.52
TSC2-206ENST00000439117 TINCRA0A1B0GVN0 87 aa11.82□□□□□ -0.52
TSC2-206ENST00000439117 IGHV3-53P01767 116 aa11.82□□□□□ -0.52
TSC2-206ENST00000439117 PFN2P35080 140 aa11.82□□□□□ -0.52
TSC2-206ENST00000439117 MAPK1IP1LQ8NDC0 245 aa11.82□□□□□ -0.52
TSC2-206ENST00000439117 PRSS47A8MTI9 375 aa11.81□□□□□ -0.52
TSC2-206ENST00000439117 RNF166Q96A37 237 aaPredicted RBP11.81□□□□□ -0.52
TSC2-206ENST00000439117 TRAV12-1A0A0B4J245 112 aa11.81□□□□□ -0.52
TSC2-206ENST00000439117 A0A1B0GX51 115 aa11.81□□□□□ -0.52
TSC2-206ENST00000439117 DKK4Q9UBT3 224 aa11.81□□□□□ -0.52
TSC2-206ENST00000439117 IGHV1OR15-1A0A075B7D0 117 aa11.81□□□□□ -0.52
TSC2-206ENST00000439117 CDK2AP2O75956 126 aa11.81□□□□□ -0.52
TSC2-206ENST00000439117 ANKHD1Q8IWZ3 2542 aaKnown RBP11.8□□□□□ -0.52
TSC2-206ENST00000439117 PLCE1Q9P212 2302 aa11.8□□□□□ -0.52
TSC2-206ENST00000439117 KAAG1Q9UBP8 84 aa11.8□□□□□ -0.52
TSC2-206ENST00000439117 Q96MF0 132 aa11.8□□□□□ -0.52
TSC2-206ENST00000439117 OVOL3O00110 214 aa11.8□□□□□ -0.52
TSC2-206ENST00000439117 ATP5G1P05496 136 aa11.8□□□□□ -0.52
TSC2-206ENST00000439117 EGR2P11161 476 aaPredicted RBP11.8□□□□□ -0.52
TSC2-206ENST00000439117 GRNP28799 593 aaKnown RBP11.8□□□□□ -0.52
TSC2-206ENST00000439117 A4D1N5 150 aa11.79□□□□□ -0.52
TSC2-206ENST00000439117 KNCNA6PVL3 124 aa11.79□□□□□ -0.52
TSC2-206ENST00000439117 H3BT86 120 aa11.79□□□□□ -0.52
TSC2-206ENST00000439117 RBX1P62877 108 aa11.79□□□□□ -0.52
TSC2-206ENST00000439117 RS1O15537 224 aa11.79□□□□□ -0.52
TSC2-206ENST00000439117 IGF2BP2-AS1Q96M15 143 aa11.79□□□□□ -0.52
TSC2-206ENST00000439117 LENEPQ9Y5L5 61 aa11.79□□□□□ -0.52
TSC2-206ENST00000439117 LYPD6Q86Y78 171 aa11.79□□□□□ -0.52
TSC2-206ENST00000439117 ZNF491Q8N8L2 437 aa11.78□□□□□ -0.52
TSC2-206ENST00000439117 KLHL30-AS1Q8NEE0 82 aa11.78□□□□□ -0.52
TSC2-206ENST00000439117 SPATA12Q7Z6I5 190 aa11.78□□□□□ -0.52
TSC2-206ENST00000439117 ZNF134P52741 427 aa11.78□□□□□ -0.52
TSC2-206ENST00000439117 ORMDL1Q9P0S3 153 aa11.78□□□□□ -0.52
TSC2-206ENST00000439117 ATP6V0E1O15342 81 aa11.77□□□□□ -0.52
TSC2-206ENST00000439117 HERV-K104P63124 156 aa11.77□□□□□ -0.52
TSC2-206ENST00000439117 SUMO4Q6EEV6 95 aa11.77□□□□□ -0.53
TSC2-206ENST00000439117 RNF183Q96D59 192 aa11.77□□□□□ -0.53
TSC2-206ENST00000439117 TRBV10-2A0A0K0K1G8 114 aa11.77□□□□□ -0.53
TSC2-206ENST00000439117 C2orf70A6NJV1 201 aa11.77□□□□□ -0.53
TSC2-206ENST00000439117 H0YGX0 51 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms