RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 SEC11CQ9BY50 192 aa6.61□□□□□ -1.35
AC011228.1-201ENST00000439027 SAV1Q9H4B6 383 aaPredicted RBP6.61□□□□□ -1.35
AC011228.1-201ENST00000439027 CELA1Q9UNI1 258 aa6.61□□□□□ -1.35
AC011228.1-201ENST00000439027 IGHV3OR16-12A0A075B7B8 117 aa6.6□□□□□ -1.35
AC011228.1-201ENST00000439027 TRBV6-1A0A0K0K1D8 114 aa6.6□□□□□ -1.35
AC011228.1-201ENST00000439027 PGPEP1LA6NFU8 196 aa6.6□□□□□ -1.35
AC011228.1-201ENST00000439027 FBLL1A6NHQ2 334 aaKnown RBP6.6□□□□□ -1.35
AC011228.1-201ENST00000439027 C9JCJ5 164 aa6.6□□□□□ -1.35
AC011228.1-201ENST00000439027 H3BMM0 161 aa6.6□□□□□ -1.35
AC011228.1-201ENST00000439027 ATP6V1G1O75348 118 aa6.6□□□□□ -1.35
AC011228.1-201ENST00000439027 LTAP01374 205 aa6.6□□□□□ -1.35
AC011228.1-201ENST00000439027 HLA-DRB4P13762 266 aa6.6□□□□□ -1.35
AC011228.1-201ENST00000439027 FXYD7P58549 80 aa6.6□□□□□ -1.35
AC011228.1-201ENST00000439027 OCC1Q8TAD7 63 aa6.6□□□□□ -1.35
AC011228.1-201ENST00000439027 TVP23CQ96ET8 276 aa6.6□□□□□ -1.35
AC011228.1-201ENST00000439027 IGF2BP2-AS1Q96M15 143 aa6.6□□□□□ -1.35
AC011228.1-201ENST00000439027 LINC00477Q96M19 166 aa6.6□□□□□ -1.35
AC011228.1-201ENST00000439027 NIPSNAP3BQ9BS92 247 aa6.6□□□□□ -1.35
AC011228.1-201ENST00000439027 PPP1R14DQ9NXH3 145 aa6.6□□□□□ -1.35
AC011228.1-201ENST00000439027 ZNF492Q9P255 531 aa6.6□□□□□ -1.35
AC011228.1-201ENST00000439027 HLA-DRB4X5D2U9 266 aa6.6□□□□□ -1.35
AC011228.1-201ENST00000439027 APOC3P02656 99 aa6.59□□□□□ -1.35
AC011228.1-201ENST00000439027 MGST1P10620 155 aaKnown RBP6.59□□□□□ -1.35
AC011228.1-201ENST00000439027 SAPCD1Q5SSQ6 148 aa6.59□□□□□ -1.35
AC011228.1-201ENST00000439027 C10orf91Q5T1B1 145 aa6.59□□□□□ -1.35
AC011228.1-201ENST00000439027 C8orf49Q96NF6 230 aa6.59□□□□□ -1.35
AC011228.1-201ENST00000439027 NDFIP1Q9BT67 221 aa6.59□□□□□ -1.35
AC011228.1-201ENST00000439027 NDUFAF3Q9BU61 184 aa6.59□□□□□ -1.35
AC011228.1-201ENST00000439027 SDF2L1Q9HCN8 221 aa6.59□□□□□ -1.35
AC011228.1-201ENST00000439027 NAT8Q9UHE5 227 aa6.59□□□□□ -1.35
AC011228.1-201ENST00000439027 ZFP30Q9Y2G7 519 aa6.59□□□□□ -1.35
AC011228.1-201ENST00000439027 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.59□□□□□ -1.35
AC011228.1-201ENST00000439027 J3KRW8 73 aa6.58□□□□□ -1.36
AC011228.1-201ENST00000439027 IGLV2-8P01709 118 aa6.58□□□□□ -1.36
AC011228.1-201ENST00000439027 SPART-AS1P0CW21 52 aa6.58□□□□□ -1.36
AC011228.1-201ENST00000439027 RPL23P62829 140 aaKnown RBP6.58□□□□□ -1.36
AC011228.1-201ENST00000439027 OR5I1Q13606 314 aa6.58□□□□□ -1.36
AC011228.1-201ENST00000439027 ADIRFQ15847 76 aa6.58□□□□□ -1.36
AC011228.1-201ENST00000439027 TMEM183AQ8IXX5 376 aa6.58□□□□□ -1.36
AC011228.1-201ENST00000439027 POM121L12Q8N7R1 296 aa6.58□□□□□ -1.36
AC011228.1-201ENST00000439027 CARHSP1Q9Y2V2 147 aaKnown RBP6.58□□□□□ -1.36
AC011228.1-201ENST00000439027 LY96Q9Y6Y9 160 aa6.58□□□□□ -1.36
AC011228.1-201ENST00000439027 KIAA1109Q2LD37 5005 aa6.58□□□□□ -1.36
AC011228.1-201ENST00000439027 K7EN84 100 aa6.57□□□□□ -1.36
AC011228.1-201ENST00000439027 M0R036 132 aa6.57□□□□□ -1.36
AC011228.1-201ENST00000439027 M0R2N4 97 aa6.57□□□□□ -1.36
AC011228.1-201ENST00000439027 AMBPP02760 352 aa6.57□□□□□ -1.36
AC011228.1-201ENST00000439027 GPX1P07203 203 aa6.57□□□□□ -1.36
AC011228.1-201ENST00000439027 P0DMU3 169 aa6.57□□□□□ -1.36
AC011228.1-201ENST00000439027 FAM231AP0DMU4 169 aa6.57□□□□□ -1.36
AC011228.1-201ENST00000439027 FAM231CP0DMU5 169 aa6.57□□□□□ -1.36
AC011228.1-201ENST00000439027 HTN3P15516 51 aa6.57□□□□□ -1.36
AC011228.1-201ENST00000439027 LEPP41159 167 aa6.57□□□□□ -1.36
AC011228.1-201ENST00000439027 C21orf62-AS1Q17RA5 79 aa6.57□□□□□ -1.36
AC011228.1-201ENST00000439027 SMUG1Q53HV7 270 aa6.57□□□□□ -1.36
AC011228.1-201ENST00000439027 PRR27Q6MZM9 219 aa6.57□□□□□ -1.36
AC011228.1-201ENST00000439027 AMTNQ6UX39 209 aa6.57□□□□□ -1.36
AC011228.1-201ENST00000439027 LINC00336Q6ZUF6 198 aa6.57□□□□□ -1.36
AC011228.1-201ENST00000439027 LINC01551Q86U37 167 aa6.57□□□□□ -1.36
AC011228.1-201ENST00000439027 UBE2DNLQ8IWF7 75 aa6.57□□□□□ -1.36
AC011228.1-201ENST00000439027 ZC2HC1AQ96GY0 325 aa6.57□□□□□ -1.36
AC011228.1-201ENST00000439027 FAM19A4Q96LR4 140 aa6.57□□□□□ -1.36
AC011228.1-201ENST00000439027 MLST8Q9BVC4 326 aa6.57□□□□□ -1.36
AC011228.1-201ENST00000439027 LENEPQ9Y5L5 61 aa6.57□□□□□ -1.36
AC011228.1-201ENST00000439027 RYR1P21817 5038 aa6.57□□□□□ -1.36
AC011228.1-201ENST00000439027 TMEM189A5PLL7 270 aa6.56□□□□□ -1.36
AC011228.1-201ENST00000439027 SMIM9A6NGZ8 99 aa6.56□□□□□ -1.36
AC011228.1-201ENST00000439027 A8MTW9 85 aa6.56□□□□□ -1.36
AC011228.1-201ENST00000439027 M0R2Z0 102 aa6.56□□□□□ -1.36
AC011228.1-201ENST00000439027 GCGP01275 180 aa6.56□□□□□ -1.36
AC011228.1-201ENST00000439027 S100A1P23297 94 aa6.56□□□□□ -1.36
AC011228.1-201ENST00000439027 TSPOP30536 169 aa6.56□□□□□ -1.36
AC011228.1-201ENST00000439027 RNASE4P34096 147 aaKnown RBP6.56□□□□□ -1.36
AC011228.1-201ENST00000439027 KIR3DS1Q14943 382 aa6.56□□□□□ -1.36
AC011228.1-201ENST00000439027 SPINK13Q1W4C9 94 aa6.56□□□□□ -1.36
AC011228.1-201ENST00000439027 ZNF705AQ6ZN79 300 aaPredicted RBP6.56□□□□□ -1.36
AC011228.1-201ENST00000439027 ZFAND2AQ8N6M9 145 aa6.56□□□□□ -1.36
AC011228.1-201ENST00000439027 SMIM12Q96EX1 92 aa6.56□□□□□ -1.36
AC011228.1-201ENST00000439027 CLUHP3Q96NS8 147 aa6.56□□□□□ -1.36
AC011228.1-201ENST00000439027 ODF3Q96PU9 254 aa6.56□□□□□ -1.36
AC011228.1-201ENST00000439027 NEU1Q99519 415 aa6.56□□□□□ -1.36
AC011228.1-201ENST00000439027 KRTAP9-9Q9BYP9 154 aa6.56□□□□□ -1.36
AC011228.1-201ENST00000439027 KRTAP9-4Q9BYQ2 154 aa6.56□□□□□ -1.36
AC011228.1-201ENST00000439027 GOLT1BQ9Y3E0 138 aa6.56□□□□□ -1.36
AC011228.1-201ENST00000439027 DNAH2Q9P225 4427 aa6.55□□□□□ -1.36
AC011228.1-201ENST00000439027 TRAV12-2A0A075B6T6 113 aa6.55□□□□□ -1.36
AC011228.1-201ENST00000439027 TRBV7-9A0A0J9YWB2 115 aa6.55□□□□□ -1.36
AC011228.1-201ENST00000439027 CRISP2P16562 243 aa6.55□□□□□ -1.36
AC011228.1-201ENST00000439027 CRIP1P50238 77 aa6.55□□□□□ -1.36
AC011228.1-201ENST00000439027 ZNF80P51504 273 aaPredicted RBP6.55□□□□□ -1.36
AC011228.1-201ENST00000439027 PNRC1Q12796 327 aaPredicted RBP6.55□□□□□ -1.36
AC011228.1-201ENST00000439027 PRR9Q5T870 116 aa6.55□□□□□ -1.36
AC011228.1-201ENST00000439027 FAM222AQ5U5X8 452 aa6.55□□□□□ -1.36
AC011228.1-201ENST00000439027 COX8CQ7Z4L0 72 aa6.55□□□□□ -1.36
AC011228.1-201ENST00000439027 SVBPQ8N300 66 aa6.55□□□□□ -1.36
AC011228.1-201ENST00000439027 CLRN3Q8NCR9 226 aa6.55□□□□□ -1.36
AC011228.1-201ENST00000439027 ISOC2Q96AB3 205 aa6.55□□□□□ -1.36
AC011228.1-201ENST00000439027 DAZAP1Q96EP5 407 aaKnown RBP6.55□□□□□ -1.36
AC011228.1-201ENST00000439027 BIN3Q9NQY0 253 aa6.55□□□□□ -1.36
AC011228.1-201ENST00000439027 FAT2Q9NYQ8 4349 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms