RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 A0A1W2PNU3 283 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P12-201ENST00000438594 NDUFAF8A1L188 74 aa2.34□□□□□ -2.03
HMGB1P12-201ENST00000438594 F8W1H4 67 aa2.34□□□□□ -2.03
HMGB1P12-201ENST00000438594 GNGT2O14610 69 aa2.34□□□□□ -2.03
HMGB1P12-201ENST00000438594 GNRH2O43555 120 aa2.34□□□□□ -2.03
HMGB1P12-201ENST00000438594 SSSCA1O60232 199 aa2.34□□□□□ -2.03
HMGB1P12-201ENST00000438594 PROSCO94903 275 aa2.34□□□□□ -2.03
HMGB1P12-201ENST00000438594 SFT2D2O95562 160 aa2.34□□□□□ -2.03
HMGB1P12-201ENST00000438594 CLPSP04118 112 aa2.34□□□□□ -2.03
HMGB1P12-201ENST00000438594 DNAH10OSP0CZ25 163 aa2.34□□□□□ -2.03
HMGB1P12-201ENST00000438594 DEFA4P12838 97 aa2.34□□□□□ -2.03
HMGB1P12-201ENST00000438594 ZNF22P17026 224 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P12-201ENST00000438594 CD24P25063 80 aa2.34□□□□□ -2.03
HMGB1P12-201ENST00000438594 FUT5Q11128 374 aa2.34□□□□□ -2.03
HMGB1P12-201ENST00000438594 DPPA3Q6W0C5 159 aa2.34□□□□□ -2.03
HMGB1P12-201ENST00000438594 Q8N814 137 aa2.34□□□□□ -2.03
HMGB1P12-201ENST00000438594 VSTM2AQ8TAG5 236 aa2.34□□□□□ -2.03
HMGB1P12-201ENST00000438594 TYMSOSQ8TAI1 123 aa2.34□□□□□ -2.03
HMGB1P12-201ENST00000438594 POP5Q969H6 163 aaKnown RBP2.34□□□□□ -2.03
HMGB1P12-201ENST00000438594 TMEM242Q9NWH2 141 aa2.34□□□□□ -2.03
HMGB1P12-201ENST00000438594 UQCR10Q9UDW1 63 aa2.34□□□□□ -2.03
HMGB1P12-201ENST00000438594 KIF26AQ9ULI4 1882 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P12-201ENST00000438594 ALS2Q96Q42 1657 aa2.34□□□□□ -2.04
HMGB1P12-201ENST00000438594 ABCA3Q99758 1704 aa2.34□□□□□ -2.04
HMGB1P12-201ENST00000438594 EDC4Q6P2E9 1401 aaKnown RBP2.34□□□□□ -2.04
HMGB1P12-201ENST00000438594 ZSWIM8A7E2V4 1837 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 LRP4O75096 1905 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 DLG5Q8TDM6 1919 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 MYH13Q9UKX3 1938 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 SCN9AQ15858 1988 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 TRAV7A0A075B6U4 112 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 FAM168BA1KXE4 195 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 LYRM1O43325 122 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 CREBL2O60519 120 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 CYB5AP00167 134 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 GYPAP02724 150 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 IL5P05113 134 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 COL8A2P25067 703 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 ASIPP42127 132 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 SSR2P43308 183 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 RPS10P46783 165 aaKnown RBP2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 KRTAP10-8P60410 259 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 INSL4Q14641 139 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 LPAL2Q16609 132 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 LYZL1Q6UWQ5 148 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 Q6ZR03 302 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 LYZL2Q7Z4W2 148 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 C5orf38Q86SI9 138 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 TMEM105Q8N8V8 129 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 LINC00301Q8NCQ3 95 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 TSKUQ8WUA8 353 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 SPTSSAQ969W0 71 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 C20orf78Q9BR46 151 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 LY96Q9Y6Y9 160 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 ROBO1Q9Y6N7 1651 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 ANKRD12Q6UB98 2062 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 PLXNB1O43157 2135 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 KDM3BQ7LBC6 1761 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 C10orf71Q711Q0 1435 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 ANKARQ7Z5J8 1434 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 MRC1P22897 1456 aa2.33□□□□□ -2.04
HMGB1P12-201ENST00000438594 HCFC1P51610 2035 aa2.32□□□□□ -2.04
HMGB1P12-201ENST00000438594 PAPPAQ13219 1627 aa2.32□□□□□ -2.04
HMGB1P12-201ENST00000438594 KIF1AQ12756 1690 aa2.32□□□□□ -2.04
HMGB1P12-201ENST00000438594 PKD1L3Q7Z443 1732 aa2.32□□□□□ -2.04
HMGB1P12-201ENST00000438594 IGKV2D-26A0A0A0MRZ7 120 aa2.32□□□□□ -2.04
HMGB1P12-201ENST00000438594 TRAV14DV4A0A0A6YYC5 116 aa2.32□□□□□ -2.04
HMGB1P12-201ENST00000438594 IGHV1-24A0A0C4DH33 117 aa2.32□□□□□ -2.04
HMGB1P12-201ENST00000438594 PANO1I0J062 215 aa2.32□□□□□ -2.04
HMGB1P12-201ENST00000438594 J3QLW9 94 aa2.32□□□□□ -2.04
HMGB1P12-201ENST00000438594 CPSF4O95639 269 aaKnown RBP2.32□□□□□ -2.04
HMGB1P12-201ENST00000438594 CBLN1P23435 193 aa2.32□□□□□ -2.04
HMGB1P12-201ENST00000438594 NFYAP23511 347 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P12-201ENST00000438594 KRTAP12-2P59991 146 aa2.32□□□□□ -2.04
HMGB1P12-201ENST00000438594 ROMO1P60602 79 aa2.32□□□□□ -2.04
HMGB1P12-201ENST00000438594 Q5W150 140 aa2.32□□□□□ -2.04
HMGB1P12-201ENST00000438594 Q6ZQT0 140 aa2.32□□□□□ -2.04
HMGB1P12-201ENST00000438594 FAM19A2Q8N3H0 131 aa2.32□□□□□ -2.04
HMGB1P12-201ENST00000438594 RNF5Q99942 180 aa2.32□□□□□ -2.04
HMGB1P12-201ENST00000438594 PMCHL2Q9BQD1 86 aa2.32□□□□□ -2.04
HMGB1P12-201ENST00000438594 LINC00467Q9BRT7 94 aa2.32□□□□□ -2.04
HMGB1P12-201ENST00000438594 CST11Q9H112 138 aa2.32□□□□□ -2.04
HMGB1P12-201ENST00000438594 RIC1Q4ADV7 1423 aa2.32□□□□□ -2.04
HMGB1P12-201ENST00000438594 ZNF407Q9C0G0 2248 aa2.32□□□□□ -2.04
HMGB1P12-201ENST00000438594 PLCH1Q4KWH8 1693 aa2.31□□□□□ -2.04
HMGB1P12-201ENST00000438594 HELZP42694 1942 aaKnown RBP2.31□□□□□ -2.04
HMGB1P12-201ENST00000438594 ANAPC1Q9H1A4 1944 aa2.31□□□□□ -2.04
HMGB1P12-201ENST00000438594 TDRD6O60522 2096 aaKnown RBP2.31□□□□□ -2.04
HMGB1P12-201ENST00000438594 TRAV3A0A0B4J244 114 aa2.31□□□□□ -2.04
HMGB1P12-201ENST00000438594 TRBV7-7A0A0K0K1E9 115 aa2.31□□□□□ -2.04
HMGB1P12-201ENST00000438594 TRBV10-2A0A0K0K1G8 114 aa2.31□□□□□ -2.04
HMGB1P12-201ENST00000438594 UBE2L5PA0A1B0GUS4 154 aa2.31□□□□□ -2.04
HMGB1P12-201ENST00000438594 hADV29S1A0JD25 119 aa2.31□□□□□ -2.04
HMGB1P12-201ENST00000438594 hDV103S1A0JD37 113 aa2.31□□□□□ -2.04
HMGB1P12-201ENST00000438594 H3BQ85 93 aa2.31□□□□□ -2.04
HMGB1P12-201ENST00000438594 PIRTP0C851 137 aa2.31□□□□□ -2.04
HMGB1P12-201ENST00000438594 MPV17P39210 176 aa2.31□□□□□ -2.04
HMGB1P12-201ENST00000438594 UBE2L3P68036 154 aaKnown RBP2.31□□□□□ -2.04
HMGB1P12-201ENST00000438594 ESRGQ1W209 222 aa2.31□□□□□ -2.04
HMGB1P12-201ENST00000438594 FAM27BQ5VT28 67 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms