RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 IGKV3D-7A0A0C4DH55 119 aa1.19□□□□□ -2.22
TRAPPC13-204ENST00000438419 IGKV3OR2-268A0A0C4DH90 116 aa1.19□□□□□ -2.22
TRAPPC13-204ENST00000438419 TAX1BP3O14907 124 aa1.19□□□□□ -2.22
TRAPPC13-204ENST00000438419 MRPS14O60783 128 aaKnown RBP1.19□□□□□ -2.22
TRAPPC13-204ENST00000438419 BANF1O75531 89 aa1.19□□□□□ -2.22
TRAPPC13-204ENST00000438419 MIFP14174 115 aa1.19□□□□□ -2.22
TRAPPC13-204ENST00000438419 SSR2P43308 183 aa1.19□□□□□ -2.22
TRAPPC13-204ENST00000438419 TAS2R41P59536 307 aa1.19□□□□□ -2.22
TRAPPC13-204ENST00000438419 BRMS1LQ5PSV4 323 aa1.19□□□□□ -2.22
TRAPPC13-204ENST00000438419 AKR1C8PQ5T2L2 129 aa1.19□□□□□ -2.22
TRAPPC13-204ENST00000438419 Q8N2B8 174 aa1.19□□□□□ -2.22
TRAPPC13-204ENST00000438419 EXOC3-AS1Q8N2X6 119 aa1.19□□□□□ -2.22
TRAPPC13-204ENST00000438419 LINC00311Q8N616 119 aa1.19□□□□□ -2.22
TRAPPC13-204ENST00000438419 GINS3Q9BRX5 216 aa1.19□□□□□ -2.22
TRAPPC13-204ENST00000438419 SOX21Q9Y651 276 aaPredicted RBP1.19□□□□□ -2.22
TRAPPC13-204ENST00000438419 LAMA4Q16363 1823 aa1.19□□□□□ -2.22
TRAPPC13-204ENST00000438419 KIF20BQ96Q89 1820 aa1.19□□□□□ -2.22
TRAPPC13-204ENST00000438419 MYH13Q9UKX3 1938 aa1.19□□□□□ -2.22
TRAPPC13-204ENST00000438419 DYNC2H1Q8NCM8 4307 aaKnown RBP1.18□□□□□ -2.22
TRAPPC13-204ENST00000438419 MCM3APO60318 1980 aa1.18□□□□□ -2.22
TRAPPC13-204ENST00000438419 KNL1Q8NG31 2342 aa1.18□□□□□ -2.22
TRAPPC13-204ENST00000438419 IGKV2-40A0A087WW87 121 aaPredicted RBP1.18□□□□□ -2.22
TRAPPC13-204ENST00000438419 H7C1C5 153 aa1.18□□□□□ -2.22
TRAPPC13-204ENST00000438419 AIPO00170 330 aa1.18□□□□□ -2.22
TRAPPC13-204ENST00000438419 UBL3O95164 117 aa1.18□□□□□ -2.22
TRAPPC13-204ENST00000438419 IGKV2D-40P01614 121 aaPredicted RBP1.18□□□□□ -2.22
TRAPPC13-204ENST00000438419 BAALC-AS2P0C853 105 aa1.18□□□□□ -2.22
TRAPPC13-204ENST00000438419 LYNX1P0DP58 116 aa1.18□□□□□ -2.22
TRAPPC13-204ENST00000438419 COX6B1P14854 86 aa1.18□□□□□ -2.22
TRAPPC13-204ENST00000438419 PHBP35232 272 aa1.18□□□□□ -2.22
TRAPPC13-204ENST00000438419 PI4KAP42356 2102 aa1.18□□□□□ -2.22
TRAPPC13-204ENST00000438419 LCN6P62502 163 aa1.18□□□□□ -2.22
TRAPPC13-204ENST00000438419 DYNLT1P63172 113 aa1.18□□□□□ -2.22
TRAPPC13-204ENST00000438419 GNG3P63215 75 aa1.18□□□□□ -2.22
TRAPPC13-204ENST00000438419 C10orf55Q5SWW7 151 aa1.18□□□□□ -2.22
TRAPPC13-204ENST00000438419 BCL2L15Q5TBC7 163 aa1.18□□□□□ -2.22
TRAPPC13-204ENST00000438419 SMIM20Q8N5G0 67 aa1.18□□□□□ -2.22
TRAPPC13-204ENST00000438419 OR2T10Q8NGZ9 312 aa1.18□□□□□ -2.22
TRAPPC13-204ENST00000438419 OR10J5Q8NHC4 309 aa1.18□□□□□ -2.22
TRAPPC13-204ENST00000438419 NEK7Q8TDX7 302 aa1.18□□□□□ -2.22
TRAPPC13-204ENST00000438419 PRADC1Q9BSG0 188 aa1.18□□□□□ -2.22
TRAPPC13-204ENST00000438419 CYSTM1Q9H1C7 97 aa1.18□□□□□ -2.22
TRAPPC13-204ENST00000438419 BCL2L10Q9HD36 194 aa1.18□□□□□ -2.22
TRAPPC13-204ENST00000438419 SSR3Q9UNL2 185 aa1.18□□□□□ -2.22
TRAPPC13-204ENST00000438419 POLEQ07864 2286 aa1.18□□□□□ -2.22
TRAPPC13-204ENST00000438419 MYLKQ15746 1914 aa1.17□□□□□ -2.22
TRAPPC13-204ENST00000438419 IGKV3-7A0A075B6H7 116 aa1.17□□□□□ -2.22
TRAPPC13-204ENST00000438419 C2orf70A6NJV1 201 aa1.17□□□□□ -2.22
TRAPPC13-204ENST00000438419 BRS3P32247 399 aa1.17□□□□□ -2.22
TRAPPC13-204ENST00000438419 VBP1P61758 197 aa1.17□□□□□ -2.22
TRAPPC13-204ENST00000438419 SNCBQ16143 134 aa1.17□□□□□ -2.22
TRAPPC13-204ENST00000438419 ESRGQ1W209 222 aa1.17□□□□□ -2.22
TRAPPC13-204ENST00000438419 UNQ6190/PRO20217Q6UXQ8 127 aa1.17□□□□□ -2.22
TRAPPC13-204ENST00000438419 PDZD9Q8IXQ8 264 aa1.17□□□□□ -2.22
TRAPPC13-204ENST00000438419 SLC30A7Q8NEW0 376 aa1.17□□□□□ -2.22
TRAPPC13-204ENST00000438419 C10orf105Q8TEF2 133 aa1.17□□□□□ -2.22
TRAPPC13-204ENST00000438419 YPEL2Q96QA6 119 aa1.17□□□□□ -2.22
TRAPPC13-204ENST00000438419 PBDC1Q9BVG4 233 aa1.17□□□□□ -2.22
TRAPPC13-204ENST00000438419 TMEM126AQ9H061 195 aa1.17□□□□□ -2.22
TRAPPC13-204ENST00000438419 SH3BGRL3Q9H299 93 aa1.17□□□□□ -2.22
TRAPPC13-204ENST00000438419 LYRM2Q9NU23 88 aaPredicted RBP1.17□□□□□ -2.22
TRAPPC13-204ENST00000438419 MED9Q9NWA0 146 aa1.17□□□□□ -2.22
TRAPPC13-204ENST00000438419 UFC1Q9Y3C8 167 aa1.17□□□□□ -2.22
TRAPPC13-204ENST00000438419 HELZP42694 1942 aaKnown RBP1.17□□□□□ -2.22
TRAPPC13-204ENST00000438419 ZGRF1Q86YA3 2104 aa1.16□□□□□ -2.22
TRAPPC13-204ENST00000438419 TRGV10A0A0A0MS01 117 aa1.16□□□□□ -2.22
TRAPPC13-204ENST00000438419 DUXBA0A1W2PPF3 345 aa1.16□□□□□ -2.22
TRAPPC13-204ENST00000438419 M0R378 163 aa1.16□□□□□ -2.22
TRAPPC13-204ENST00000438419 NDUFB3O43676 98 aa1.16□□□□□ -2.22
TRAPPC13-204ENST00000438419 MFSD11O43934 449 aa1.16□□□□□ -2.22
TRAPPC13-204ENST00000438419 OR1I1O60431 355 aa1.16□□□□□ -2.22
TRAPPC13-204ENST00000438419 PROSCO94903 275 aa1.16□□□□□ -2.22
TRAPPC13-204ENST00000438419 UBE2BP63146 152 aa1.16□□□□□ -2.22
TRAPPC13-204ENST00000438419 C22orf39Q6P5X5 142 aa1.16□□□□□ -2.22
TRAPPC13-204ENST00000438419 SOSTDC1Q6X4U4 206 aa1.16□□□□□ -2.22
TRAPPC13-204ENST00000438419 C3orf56Q8N813 242 aa1.16□□□□□ -2.22
TRAPPC13-204ENST00000438419 C12orf29Q8N999 325 aa1.16□□□□□ -2.22
TRAPPC13-204ENST00000438419 ACER3Q9NUN7 267 aa1.16□□□□□ -2.22
TRAPPC13-204ENST00000438419 PCTPQ9UKL6 214 aa1.16□□□□□ -2.22
TRAPPC13-204ENST00000438419 HS3ST2Q9Y278 367 aa1.16□□□□□ -2.22
TRAPPC13-204ENST00000438419 Q9Y3F1 56 aa1.16□□□□□ -2.22
TRAPPC13-204ENST00000438419 TNRC6BQ9UPQ9 1833 aaKnown RBP1.16□□□□□ -2.22
TRAPPC13-204ENST00000438419 DMBT1Q9UGM3 2413 aaPredicted RBP1.16□□□□□ -2.22
TRAPPC13-204ENST00000438419 DNAH1Q9P2D7 4330 aa1.16□□□□□ -2.22
TRAPPC13-204ENST00000438419 CHD3Q12873 2000 aaKnown RBP1.15□□□□□ -2.22
TRAPPC13-204ENST00000438419 TMEM256-PLSCR3K7ERE1 68 aa1.15□□□□□ -2.22
TRAPPC13-204ENST00000438419 GGCTO75223 188 aaKnown RBP1.15□□□□□ -2.22
TRAPPC13-204ENST00000438419 GADD45GO95257 159 aa1.15□□□□□ -2.22
TRAPPC13-204ENST00000438419 ANGP03950 147 aaKnown RBP1.15□□□□□ -2.22
TRAPPC13-204ENST00000438419 ARL14EPLP0DKL9 152 aa1.15□□□□□ -2.22
TRAPPC13-204ENST00000438419 RNASE3P12724 160 aaKnown RBP1.15□□□□□ -2.22
TRAPPC13-204ENST00000438419 NFYBP25208 207 aa1.15□□□□□ -2.22
TRAPPC13-204ENST00000438419 CRYBA4P53673 196 aa1.15□□□□□ -2.22
TRAPPC13-204ENST00000438419 RHOGP84095 191 aa1.15□□□□□ -2.22
TRAPPC13-204ENST00000438419 PDE6HQ13956 83 aa1.15□□□□□ -2.22
TRAPPC13-204ENST00000438419 SCGB2B2Q4G0G5 96 aa1.15□□□□□ -2.22
TRAPPC13-204ENST00000438419 TRIQKQ629K1 86 aa1.15□□□□□ -2.22
TRAPPC13-204ENST00000438419 STX12Q86Y82 276 aa1.15□□□□□ -2.22
TRAPPC13-204ENST00000438419 LINC00301Q8NCQ3 95 aa1.15□□□□□ -2.22
TRAPPC13-204ENST00000438419 CANT1Q8WVQ1 401 aa1.15□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 266.8 ms