RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 LY96Q9Y6Y9 160 aa9.72□□□□□ -0.85
TNFRSF1A-203ENST00000437813 SRRM2Q9UQ35 2752 aaKnown RBP9.71□□□□□ -0.85
TNFRSF1A-203ENST00000437813 SSNA1O43805 119 aa9.71□□□□□ -0.86
TNFRSF1A-203ENST00000437813 IGLV2-11P01706 119 aa9.71□□□□□ -0.86
TNFRSF1A-203ENST00000437813 GATA1P15976 413 aaPredicted RBP9.71□□□□□ -0.86
TNFRSF1A-203ENST00000437813 SRIP30626 198 aa9.71□□□□□ -0.86
TNFRSF1A-203ENST00000437813 KRTAP10-1P60331 282 aa9.71□□□□□ -0.86
TNFRSF1A-203ENST00000437813 ERVFC1-1P60608 527 aa9.71□□□□□ -0.86
TNFRSF1A-203ENST00000437813 GNG5P63218 68 aa9.71□□□□□ -0.86
TNFRSF1A-203ENST00000437813 LINC01559Q495D7 138 aa9.71□□□□□ -0.86
TNFRSF1A-203ENST00000437813 MSRB1Q9NZV6 116 aa9.71□□□□□ -0.86
TNFRSF1A-203ENST00000437813 DMBT1Q9UGM3 2413 aaPredicted RBP9.71□□□□□ -0.86
TNFRSF1A-203ENST00000437813 TRAV21A0A0B4J279 112 aa9.7□□□□□ -0.86
TNFRSF1A-203ENST00000437813 F6UZH7 168 aa9.7□□□□□ -0.86
TNFRSF1A-203ENST00000437813 ZNF80P51504 273 aaPredicted RBP9.7□□□□□ -0.86
TNFRSF1A-203ENST00000437813 ACOT6Q3I5F7 207 aaPredicted RBP9.7□□□□□ -0.86
TNFRSF1A-203ENST00000437813 OR2G3Q8NGZ4 309 aa9.7□□□□□ -0.86
TNFRSF1A-203ENST00000437813 TREM1Q9NP99 234 aa9.7□□□□□ -0.86
TNFRSF1A-203ENST00000437813 C9JCJ5 164 aa9.69□□□□□ -0.86
TNFRSF1A-203ENST00000437813 HMGB3O15347 200 aaKnown RBP9.69□□□□□ -0.86
TNFRSF1A-203ENST00000437813 STAG3L2P0CL84 134 aa9.69□□□□□ -0.86
TNFRSF1A-203ENST00000437813 STAG3L3P0CL85 134 aa9.69□□□□□ -0.86
TNFRSF1A-203ENST00000437813 ARL14EPLP0DKL9 152 aa9.69□□□□□ -0.86
TNFRSF1A-203ENST00000437813 FAT1Q14517 4588 aa9.69□□□□□ -0.86
TNFRSF1A-203ENST00000437813 DPPA3Q6W0C5 159 aa9.69□□□□□ -0.86
TNFRSF1A-203ENST00000437813 OR4C5Q8NGB2 326 aa9.69□□□□□ -0.86
TNFRSF1A-203ENST00000437813 CMTM2Q8TAZ6 248 aa9.69□□□□□ -0.86
TNFRSF1A-203ENST00000437813 TXNDC17Q9BRA2 123 aa9.69□□□□□ -0.86
TNFRSF1A-203ENST00000437813 NAGKQ9UJ70 344 aa9.69□□□□□ -0.86
TNFRSF1A-203ENST00000437813 TRAV9-2A0A087WT02 112 aa9.68□□□□□ -0.86
TNFRSF1A-203ENST00000437813 LRCOL1A6NCL2 159 aa9.68□□□□□ -0.86
TNFRSF1A-203ENST00000437813 FAM74A1Q5RGS3 127 aa9.68□□□□□ -0.86
TNFRSF1A-203ENST00000437813 OR10G9Q8NGN4 311 aa9.68□□□□□ -0.86
TNFRSF1A-203ENST00000437813 OR10G7Q8NGN6 311 aa9.68□□□□□ -0.86
TNFRSF1A-203ENST00000437813 C9orf85Q96MD7 179 aa9.68□□□□□ -0.86
TNFRSF1A-203ENST00000437813 RPH3ALQ9UNE2 315 aa9.68□□□□□ -0.86
TNFRSF1A-203ENST00000437813 HERC1Q15751 4861 aa9.68□□□□□ -0.86
TNFRSF1A-203ENST00000437813 A0A1W2PPV4 95 aa9.67□□□□□ -0.86
TNFRSF1A-203ENST00000437813 GGTLC3B5MD39 225 aa9.67□□□□□ -0.86
TNFRSF1A-203ENST00000437813 TCRAP04437 139 aa9.67□□□□□ -0.86
TNFRSF1A-203ENST00000437813 EVI2AP22794 236 aa9.67□□□□□ -0.86
TNFRSF1A-203ENST00000437813 DEFA1P59665 94 aa9.67□□□□□ -0.86
TNFRSF1A-203ENST00000437813 DEFA3P59666 94 aa9.67□□□□□ -0.86
TNFRSF1A-203ENST00000437813 CFAP126Q5VTH2 177 aa9.67□□□□□ -0.86
TNFRSF1A-203ENST00000437813 SLC25A29Q8N8R3 303 aa9.67□□□□□ -0.86
TNFRSF1A-203ENST00000437813 C5orf17Q8NAS9 161 aa9.67□□□□□ -0.86
TNFRSF1A-203ENST00000437813 PCNPQ8WW12 178 aaKnown RBP9.67□□□□□ -0.86
TNFRSF1A-203ENST00000437813 RAB24Q969Q5 203 aa9.67□□□□□ -0.86
TNFRSF1A-203ENST00000437813 PTH2Q96A98 100 aa9.67□□□□□ -0.86
TNFRSF1A-203ENST00000437813 KCNS1Q96KK3 526 aa9.67□□□□□ -0.86
TNFRSF1A-203ENST00000437813 AQP10Q96PS8 301 aa9.67□□□□□ -0.86
TNFRSF1A-203ENST00000437813 PSMG3Q9BT73 122 aaPredicted RBP9.67□□□□□ -0.86
TNFRSF1A-203ENST00000437813 SDF2L1Q9HCN8 221 aa9.67□□□□□ -0.86
TNFRSF1A-203ENST00000437813 SERTM2A0A1B0GWG4 89 aa9.66□□□□□ -0.86
TNFRSF1A-203ENST00000437813 EREGO14944 169 aa9.66□□□□□ -0.86
TNFRSF1A-203ENST00000437813 RS1O15537 224 aa9.66□□□□□ -0.86
TNFRSF1A-203ENST00000437813 CRYGDP07320 174 aa9.66□□□□□ -0.86
TNFRSF1A-203ENST00000437813 RNASE3P12724 160 aaKnown RBP9.66□□□□□ -0.86
TNFRSF1A-203ENST00000437813 GCHFRP30047 84 aa9.66□□□□□ -0.86
TNFRSF1A-203ENST00000437813 CDC34P49427 236 aaPredicted RBP9.66□□□□□ -0.86
TNFRSF1A-203ENST00000437813 LINC01556Q5JQF7 62 aa9.66□□□□□ -0.86
TNFRSF1A-203ENST00000437813 SH2D6Q7Z4S9 175 aa9.66□□□□□ -0.86
TNFRSF1A-203ENST00000437813 ASB13Q8WXK3 278 aa9.66□□□□□ -0.86
TNFRSF1A-203ENST00000437813 SGK494Q96LW2 274 aa9.66□□□□□ -0.86
TNFRSF1A-203ENST00000437813 ALG5Q9Y673 324 aa9.66□□□□□ -0.86
TNFRSF1A-203ENST00000437813 FLG2Q5D862 2391 aaPredicted RBP9.66□□□□□ -0.86
TNFRSF1A-203ENST00000437813 VPS13BQ7Z7G8 4022 aa9.66□□□□□ -0.86
TNFRSF1A-203ENST00000437813 TRBV6-4A0A1B0GX49 114 aa9.65□□□□□ -0.86
TNFRSF1A-203ENST00000437813 EPM2AB3EWF7 344 aa9.65□□□□□ -0.86
TNFRSF1A-203ENST00000437813 Q5BKY6 102 aa9.65□□□□□ -0.86
TNFRSF1A-203ENST00000437813 C10orf126Q8N4M7 172 aa9.65□□□□□ -0.86
TNFRSF1A-203ENST00000437813 IGHV3-38A0A0C4DH36 116 aa9.64□□□□□ -0.87
TNFRSF1A-203ENST00000437813 PGPEP1LA6NFU8 196 aa9.64□□□□□ -0.87
TNFRSF1A-203ENST00000437813 FBLL1A6NHQ2 334 aaKnown RBP9.64□□□□□ -0.87
TNFRSF1A-203ENST00000437813 IBA57-AS1B1ANH7 110 aa9.64□□□□□ -0.87
TNFRSF1A-203ENST00000437813 PFN1P07737 140 aaKnown RBP9.64□□□□□ -0.87
TNFRSF1A-203ENST00000437813 LINC00694P0DN24 101 aa9.64□□□□□ -0.87
TNFRSF1A-203ENST00000437813 ATP6V0CP27449 155 aa9.64□□□□□ -0.87
TNFRSF1A-203ENST00000437813 ZNF876PQ49A33 203 aa9.64□□□□□ -0.87
TNFRSF1A-203ENST00000437813 TMEM75Q8N9X5 138 aa9.64□□□□□ -0.87
TNFRSF1A-203ENST00000437813 HSD17B11Q8NBQ5 300 aa9.64□□□□□ -0.87
TNFRSF1A-203ENST00000437813 TAAR5O14804 337 aa9.63□□□□□ -0.87
TNFRSF1A-203ENST00000437813 CIDEAO60543 219 aa9.63□□□□□ -0.87
TNFRSF1A-203ENST00000437813 GCGP01275 180 aa9.63□□□□□ -0.87
TNFRSF1A-203ENST00000437813 SERF2P84101 59 aa9.63□□□□□ -0.87
TNFRSF1A-203ENST00000437813 ZNF506Q5JVG8 444 aa9.63□□□□□ -0.87
TNFRSF1A-203ENST00000437813 SH3BGRL3Q9H299 93 aa9.63□□□□□ -0.87
TNFRSF1A-203ENST00000437813 EPDR1Q9UM22 224 aa9.63□□□□□ -0.87
TNFRSF1A-203ENST00000437813 PSG8Q9UQ74 426 aa9.63□□□□□ -0.87
TNFRSF1A-203ENST00000437813 MYCBP2O75592 4640 aa9.62□□□□□ -0.87
TNFRSF1A-203ENST00000437813 RNF222A6NCQ9 220 aa9.62□□□□□ -0.87
TNFRSF1A-203ENST00000437813 SUMO1P63165 101 aaKnown RBP9.62□□□□□ -0.87
TNFRSF1A-203ENST00000437813 FLI1Q01543 452 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF1A-203ENST00000437813 ZNF726P1Q15940 193 aa9.62□□□□□ -0.87
TNFRSF1A-203ENST00000437813 Q6ZSN1 163 aa9.62□□□□□ -0.87
TNFRSF1A-203ENST00000437813 IGKV3D-20A0A0C4DH25 116 aa9.61□□□□□ -0.87
TNFRSF1A-203ENST00000437813 J3QL48 77 aa9.61□□□□□ -0.87
TNFRSF1A-203ENST00000437813 GCSHP23434 173 aa9.61□□□□□ -0.87
TNFRSF1A-203ENST00000437813 RHOHQ15669 191 aa9.61□□□□□ -0.87
TNFRSF1A-203ENST00000437813 PIK3CD-AS1Q5SR53 167 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms