RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 B4DSR2 109 aa7.28□□□□□ -1.24
CUX1-206ENST00000437600 HAX1O00165 279 aa7.28□□□□□ -1.24
CUX1-206ENST00000437600 GATA1P15976 413 aaPredicted RBP7.28□□□□□ -1.24
CUX1-206ENST00000437600 EDN2P20800 178 aa7.28□□□□□ -1.24
CUX1-206ENST00000437600 DUX5Q96PT3 197 aa7.28□□□□□ -1.24
CUX1-206ENST00000437600 GAGE12BA1L429 117 aa7.27□□□□□ -1.24
CUX1-206ENST00000437600 ID1P41134 155 aa7.27□□□□□ -1.24
CUX1-206ENST00000437600 FOXE3Q13461 319 aa7.27□□□□□ -1.24
CUX1-206ENST00000437600 HIST2H2BDQ6DRA6 164 aa7.27□□□□□ -1.24
CUX1-206ENST00000437600 GLMPQ8WWB7 406 aa7.27□□□□□ -1.24
CUX1-206ENST00000437600 OR4C46A6NHA9 309 aa7.27□□□□□ -1.25
CUX1-206ENST00000437600 SAP30O75446 220 aa7.27□□□□□ -1.25
CUX1-206ENST00000437600 TRGV3P03979 118 aa7.27□□□□□ -1.25
CUX1-206ENST00000437600 TMEM70Q9BUB7 260 aa7.27□□□□□ -1.25
CUX1-206ENST00000437600 ZFAND3Q9H8U3 227 aa7.27□□□□□ -1.25
CUX1-206ENST00000437600 EVI2AP22794 236 aa7.27□□□□□ -1.25
CUX1-206ENST00000437600 RPS20P60866 119 aaKnown RBP7.27□□□□□ -1.25
CUX1-206ENST00000437600 CT83Q5H943 113 aa7.27□□□□□ -1.25
CUX1-206ENST00000437600 FAM162BQ5T6X4 162 aa7.27□□□□□ -1.25
CUX1-206ENST00000437600 C10orf99Q6UWK7 81 aa7.27□□□□□ -1.25
CUX1-206ENST00000437600 LYPD1Q8N2G4 141 aa7.27□□□□□ -1.25
CUX1-206ENST00000437600 GFRA4Q9GZZ7 299 aa7.27□□□□□ -1.25
CUX1-206ENST00000437600 AGPAT4-IT1Q9H0P7 198 aa7.27□□□□□ -1.25
CUX1-206ENST00000437600 TNFRSF18Q9Y5U5 241 aa7.27□□□□□ -1.25
CUX1-206ENST00000437600 FN1P02751 2386 aaKnown RBP7.27□□□□□ -1.25
CUX1-206ENST00000437600 SCGB1A1P11684 91 aa7.26□□□□□ -1.25
CUX1-206ENST00000437600 PSG9Q00887 426 aa7.26□□□□□ -1.25
CUX1-206ENST00000437600 RIGQ13278 110 aa7.26□□□□□ -1.25
CUX1-206ENST00000437600 KIR3DS1Q14943 382 aa7.26□□□□□ -1.25
CUX1-206ENST00000437600 BVES-AS1Q5T3Y7 98 aa7.26□□□□□ -1.25
CUX1-206ENST00000437600 OR8A1Q8NGG7 326 aa7.26□□□□□ -1.25
CUX1-206ENST00000437600 FAM110DQ8TAY7 271 aaPredicted RBP7.26□□□□□ -1.25
CUX1-206ENST00000437600 NDFIP1Q9BT67 221 aa7.26□□□□□ -1.25
CUX1-206ENST00000437600 C11orf21Q9P2W6 132 aa7.26□□□□□ -1.25
CUX1-206ENST00000437600 F6UB75 175 aa7.26□□□□□ -1.25
CUX1-206ENST00000437600 SYS1-DBNDD2H3BUS1 97 aa7.26□□□□□ -1.25
CUX1-206ENST00000437600 IGHV4-59P01825 116 aa7.26□□□□□ -1.25
CUX1-206ENST00000437600 SMR3AQ99954 134 aa7.26□□□□□ -1.25
CUX1-206ENST00000437600 FAM110AQ9BQ89 295 aa7.26□□□□□ -1.25
CUX1-206ENST00000437600 MOB4Q9Y3A3 225 aa7.26□□□□□ -1.25
CUX1-206ENST00000437600 AGRNO00468 2067 aa7.25□□□□□ -1.25
CUX1-206ENST00000437600 TRAV41A0A0B4J266 112 aa7.25□□□□□ -1.25
CUX1-206ENST00000437600 ATP5G2Q06055 141 aa7.25□□□□□ -1.25
CUX1-206ENST00000437600 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.25□□□□□ -1.25
CUX1-206ENST00000437600 C18orf15Q96N68 181 aa7.25□□□□□ -1.25
CUX1-206ENST00000437600 AP5S1Q9NUS5 200 aa7.25□□□□□ -1.25
CUX1-206ENST00000437600 BEX4Q9NWD9 120 aaPredicted RBP7.25□□□□□ -1.25
CUX1-206ENST00000437600 SLC25A16P16260 332 aa7.25□□□□□ -1.25
CUX1-206ENST00000437600 CKS1BP61024 79 aa7.25□□□□□ -1.25
CUX1-206ENST00000437600 PDE6HQ13956 83 aa7.25□□□□□ -1.25
CUX1-206ENST00000437600 DEFB112Q30KQ8 113 aa7.25□□□□□ -1.25
CUX1-206ENST00000437600 DEFB125Q8N687 156 aa7.25□□□□□ -1.25
CUX1-206ENST00000437600 TRAV8-6A0A0B4J262 113 aa7.25□□□□□ -1.25
CUX1-206ENST00000437600 TRAV26-2A0A0B4J265 109 aa7.25□□□□□ -1.25
CUX1-206ENST00000437600 TRBV7-9A0A0J9YWB2 115 aa7.25□□□□□ -1.25
CUX1-206ENST00000437600 MRPL51Q4U2R6 128 aaKnown RBP7.25□□□□□ -1.25
CUX1-206ENST00000437600 FER1L6-AS1Q8NA97 138 aa7.25□□□□□ -1.25
CUX1-206ENST00000437600 SIVA1O15304 175 aa7.24□□□□□ -1.25
CUX1-206ENST00000437600 NPYP01303 97 aa7.24□□□□□ -1.25
CUX1-206ENST00000437600 CKS2P33552 79 aa7.24□□□□□ -1.25
CUX1-206ENST00000437600 FA2HQ7L5A8 372 aa7.24□□□□□ -1.25
CUX1-206ENST00000437600 OR1N2Q8NGR9 330 aa7.24□□□□□ -1.25
CUX1-206ENST00000437600 PRELID3AQ96N28 172 aa7.24□□□□□ -1.25
CUX1-206ENST00000437600 SIGLEC8Q9NYZ4 499 aa7.24□□□□□ -1.25
CUX1-206ENST00000437600 TRAV8-2A0A0B4J237 113 aa7.24□□□□□ -1.25
CUX1-206ENST00000437600 FAM231BA6NCW3 169 aa7.24□□□□□ -1.25
CUX1-206ENST00000437600 FBLL1A6NHQ2 334 aaKnown RBP7.24□□□□□ -1.25
CUX1-206ENST00000437600 IGHV4-31P0DP07 118 aa7.24□□□□□ -1.25
CUX1-206ENST00000437600 SLC25A34Q6PIV7 304 aa7.24□□□□□ -1.25
CUX1-206ENST00000437600 C8orf86Q6ZUL3 223 aa7.24□□□□□ -1.25
CUX1-206ENST00000437600 A0A087X0K7 114 aa7.23□□□□□ -1.25
CUX1-206ENST00000437600 IGKV3D-20A0A0C4DH25 116 aa7.23□□□□□ -1.25
CUX1-206ENST00000437600 DSCR9P59020 149 aa7.23□□□□□ -1.25
CUX1-206ENST00000437600 TM4SF20Q53R12 229 aa7.23□□□□□ -1.25
CUX1-206ENST00000437600 LINC01356Q8N9X3 169 aa7.23□□□□□ -1.25
CUX1-206ENST00000437600 EEF1AKMT3Q96AZ1 226 aa7.23□□□□□ -1.25
CUX1-206ENST00000437600 C16orf92Q96LL3 132 aa7.23□□□□□ -1.25
CUX1-206ENST00000437600 OR5AL1P0C617 328 aa7.23□□□□□ -1.25
CUX1-206ENST00000437600 ARL3P36405 182 aa7.23□□□□□ -1.25
CUX1-206ENST00000437600 FAM104BQ5XKR9 115 aa7.23□□□□□ -1.25
CUX1-206ENST00000437600 C12orf54Q6X4T0 127 aa7.23□□□□□ -1.25
CUX1-206ENST00000437600 C20orf173Q96LM9 149 aa7.23□□□□□ -1.25
CUX1-206ENST00000437600 METTL26Q96S19 204 aa7.23□□□□□ -1.25
CUX1-206ENST00000437600 FABP5P3A8MUU1 101 aa7.22□□□□□ -1.25
CUX1-206ENST00000437600 OR10AG1Q8NH19 301 aa7.22□□□□□ -1.25
CUX1-206ENST00000437600 MAP1LC3CQ9BXW4 147 aa7.22□□□□□ -1.25
CUX1-206ENST00000437600 ST20Q9HBF5 79 aa7.22□□□□□ -1.25
CUX1-206ENST00000437600 SS18L2Q9UHA2 77 aa7.22□□□□□ -1.25
CUX1-206ENST00000437600 A0A096LNJ9 63 aa7.22□□□□□ -1.25
CUX1-206ENST00000437600 PRR9Q5T870 116 aa7.22□□□□□ -1.25
CUX1-206ENST00000437600 GAGE10A6NGK3 116 aa7.22□□□□□ -1.25
CUX1-206ENST00000437600 AZU1P20160 251 aa7.22□□□□□ -1.25
CUX1-206ENST00000437600 SMAGPQ0VAQ4 97 aa7.22□□□□□ -1.25
CUX1-206ENST00000437600 LRRC75A-AS1Q8N1F1 130 aa7.22□□□□□ -1.25
CUX1-206ENST00000437600 CHCHD1Q96BP2 118 aaKnown RBP7.22□□□□□ -1.25
CUX1-206ENST00000437600 PEF1Q9UBV8 284 aaKnown RBP7.22□□□□□ -1.25
CUX1-206ENST00000437600 C2CD3Q4AC94 2353 aa7.22□□□□□ -1.25
CUX1-206ENST00000437600 A6NDX4 124 aa7.21□□□□□ -1.25
CUX1-206ENST00000437600 ZNF747Q9BV97 191 aa7.21□□□□□ -1.25
CUX1-206ENST00000437600 YAE1D1Q9NRH1 226 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms