RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 CACNG7P62955 275 aa19.3■□□□□ 0.68
CPNE1-216ENST00000437340 SELENOKQ9Y6D0 94 aa19.3■□□□□ 0.68
CPNE1-216ENST00000437340 CUBNO60494 3623 aa19.3■□□□□ 0.68
CPNE1-216ENST00000437340 PPBPP02775 128 aa19.29■□□□□ 0.68
CPNE1-216ENST00000437340 Q6ZQT7 251 aa19.29■□□□□ 0.68
CPNE1-216ENST00000437340 HIVEP1P15822 2718 aa19.29■□□□□ 0.68
CPNE1-216ENST00000437340 MTORP42345 2549 aa19.29■□□□□ 0.68
CPNE1-216ENST00000437340 HIVEP2P31629 2446 aa19.29■□□□□ 0.68
CPNE1-216ENST00000437340 KIR2DL5BA0A0G2JN68 375 aa19.29■□□□□ 0.68
CPNE1-216ENST00000437340 KIR2DL5BA0A0G2JPC4 375 aa19.29■□□□□ 0.68
CPNE1-216ENST00000437340 CKS2P33552 79 aa19.29■□□□□ 0.68
CPNE1-216ENST00000437340 KIR2DL5AQ8N109 375 aa19.29■□□□□ 0.68
CPNE1-216ENST00000437340 RNF185Q96GF1 192 aa19.29■□□□□ 0.68
CPNE1-216ENST00000437340 AP5S1Q9NUS5 200 aa19.29■□□□□ 0.68
CPNE1-216ENST00000437340 CSN3P07498 182 aa19.28■□□□□ 0.68
CPNE1-216ENST00000437340 TCTEX1D4Q5JR98 221 aa19.28■□□□□ 0.68
CPNE1-216ENST00000437340 PRSS3P2Q8NHM4 247 aa19.28■□□□□ 0.68
CPNE1-216ENST00000437340 WFDC12Q8WWY7 111 aa19.28■□□□□ 0.68
CPNE1-216ENST00000437340 ODF3Q96PU9 254 aa19.28■□□□□ 0.68
CPNE1-216ENST00000437340 KLLNB2CW77 178 aa19.27■□□□□ 0.68
CPNE1-216ENST00000437340 FOSL1P15407 271 aa19.27■□□□□ 0.68
CPNE1-216ENST00000437340 BTF3P20290 206 aaKnown RBP19.27■□□□□ 0.68
CPNE1-216ENST00000437340 EBLN2Q6P2I7 272 aa19.27■□□□□ 0.68
CPNE1-216ENST00000437340 FA2HQ7L5A8 372 aa19.27■□□□□ 0.68
CPNE1-216ENST00000437340 J3KRW8 73 aa19.27■□□□□ 0.67
CPNE1-216ENST00000437340 RNASE4P34096 147 aaKnown RBP19.27■□□□□ 0.67
CPNE1-216ENST00000437340 SCGB2A2Q13296 93 aa19.27■□□□□ 0.67
CPNE1-216ENST00000437340 C18orf65Q6ZTR6 163 aa19.27■□□□□ 0.67
CPNE1-216ENST00000437340 OR10AG1Q8NH19 301 aa19.27■□□□□ 0.67
CPNE1-216ENST00000437340 ESM1Q9NQ30 184 aa19.27■□□□□ 0.67
CPNE1-216ENST00000437340 LAMTOR2Q9Y2Q5 125 aa19.27■□□□□ 0.67
CPNE1-216ENST00000437340 SETXQ7Z333 2677 aaKnown RBP19.26■□□□□ 0.67
CPNE1-216ENST00000437340 SMIM15Q7Z3B0 74 aa19.26■□□□□ 0.67
CPNE1-216ENST00000437340 LEPROTL1O95214 131 aa19.25■□□□□ 0.67
CPNE1-216ENST00000437340 ZNF688P0C7X2 276 aa19.25■□□□□ 0.67
CPNE1-216ENST00000437340 MED14OSP0DP75 135 aa19.25■□□□□ 0.67
CPNE1-216ENST00000437340 TFPI2P48307 235 aa19.25■□□□□ 0.67
CPNE1-216ENST00000437340 SLURP1P55000 103 aa19.25■□□□□ 0.67
CPNE1-216ENST00000437340 PSMG4Q5JS54 123 aa19.25■□□□□ 0.67
CPNE1-216ENST00000437340 OR11H1Q8NG94 326 aa19.25■□□□□ 0.67
CPNE1-216ENST00000437340 DPF1Q92782 380 aa19.25■□□□□ 0.67
CPNE1-216ENST00000437340 VAMP8Q9BV40 100 aa19.25■□□□□ 0.67
CPNE1-216ENST00000437340 PEMTQ9UBM1 199 aa19.25■□□□□ 0.67
CPNE1-216ENST00000437340 DEFA6Q01524 100 aa19.24■□□□□ 0.67
CPNE1-216ENST00000437340 PMCHL1Q16048 86 aa19.24■□□□□ 0.67
CPNE1-216ENST00000437340 DEFB136Q30KP8 78 aa19.24■□□□□ 0.67
CPNE1-216ENST00000437340 OR1N2Q8NGR9 330 aa19.24■□□□□ 0.67
CPNE1-216ENST00000437340 SIGLEC8Q9NYZ4 499 aa19.24■□□□□ 0.67
CPNE1-216ENST00000437340 A0A0J9YX75 114 aa19.24■□□□□ 0.67
CPNE1-216ENST00000437340 SPANXN1Q5VSR9 72 aa19.24■□□□□ 0.67
CPNE1-216ENST00000437340 ADAMTSL5Q6ZMM2 481 aa19.24■□□□□ 0.67
CPNE1-216ENST00000437340 CYSRT1A8MQ03 144 aa19.23■□□□□ 0.67
CPNE1-216ENST00000437340 H3BVH4 76 aa19.23■□□□□ 0.67
CPNE1-216ENST00000437340 CRXO43186 299 aaPredicted RBP19.23■□□□□ 0.67
CPNE1-216ENST00000437340 IFI27P40305 119 aaPredicted RBP19.23■□□□□ 0.67
CPNE1-216ENST00000437340 ASIPP42127 132 aa19.23■□□□□ 0.67
CPNE1-216ENST00000437340 ANXA2RQ3ZCQ2 193 aa19.23■□□□□ 0.67
CPNE1-216ENST00000437340 C20orf144Q9BQM9 153 aa19.23■□□□□ 0.67
CPNE1-216ENST00000437340 TMEM70Q9BUB7 260 aa19.23■□□□□ 0.67
CPNE1-216ENST00000437340 LEPP41159 167 aa19.22■□□□□ 0.67
CPNE1-216ENST00000437340 TDRG1Q3Y452 100 aa19.22■□□□□ 0.67
CPNE1-216ENST00000437340 HSPB8Q9UJY1 196 aa19.22■□□□□ 0.67
CPNE1-216ENST00000437340 TCF21O43680 179 aa19.21■□□□□ 0.67
CPNE1-216ENST00000437340 CTAG1AP78358 180 aa19.21■□□□□ 0.67
CPNE1-216ENST00000437340 OR9G4Q8NGQ1 327 aa19.21■□□□□ 0.67
CPNE1-216ENST00000437340 INAFM1C9JVW0 142 aa19.21■□□□□ 0.67
CPNE1-216ENST00000437340 NPYP01303 97 aa19.21■□□□□ 0.67
CPNE1-216ENST00000437340 S100A4P26447 101 aaKnown RBP19.21■□□□□ 0.67
CPNE1-216ENST00000437340 KHDC1LQ5JSQ8 128 aa19.21■□□□□ 0.67
CPNE1-216ENST00000437340 TRAV2A0A0B4J234 112 aa19.2■□□□□ 0.66
CPNE1-216ENST00000437340 SMKR1H3BMG3 65 aa19.2■□□□□ 0.66
CPNE1-216ENST00000437340 RNASE1P07998 156 aaKnown RBP19.2■□□□□ 0.66
CPNE1-216ENST00000437340 KIR3DS1Q14943 382 aa19.2■□□□□ 0.66
CPNE1-216ENST00000437340 KLHL30-AS1Q8NEE0 82 aa19.2■□□□□ 0.66
CPNE1-216ENST00000437340 NDUFAF3Q9BU61 184 aa19.2■□□□□ 0.66
CPNE1-216ENST00000437340 SCRT2Q9NQ03 307 aa19.2■□□□□ 0.66
CPNE1-216ENST00000437340 DUSP14O95147 198 aaKnown RBP19.19■□□□□ 0.66
CPNE1-216ENST00000437340 EVI2AP22794 236 aa19.19■□□□□ 0.66
CPNE1-216ENST00000437340 NSD1Q96L73 2696 aaPredicted RBP19.19■□□□□ 0.66
CPNE1-216ENST00000437340 LOC389332A0A1B0GUA5 103 aa19.19■□□□□ 0.66
CPNE1-216ENST00000437340 NCR2O95944 276 aa19.19■□□□□ 0.66
CPNE1-216ENST00000437340 FOXI2Q6ZQN5 318 aa19.18■□□□□ 0.66
CPNE1-216ENST00000437340 MAP1LC3AQ9H492 121 aa19.18■□□□□ 0.66
CPNE1-216ENST00000437340 PAM16Q9Y3D7 125 aa19.18■□□□□ 0.66
CPNE1-216ENST00000437340 SYS1-DBNDD2H3BUS1 97 aa19.17■□□□□ 0.66
CPNE1-216ENST00000437340 C14orf144Q96I85 54 aa19.17■□□□□ 0.66
CPNE1-216ENST00000437340 C16orf95Q9H693 158 aa19.17■□□□□ 0.66
CPNE1-216ENST00000437340 ZNF418Q8TF45 676 aaPredicted RBP19.16■□□□□ 0.66
CPNE1-216ENST00000437340 MAP1LC3CQ9BXW4 147 aa19.16■□□□□ 0.66
CPNE1-216ENST00000437340 C7orf71A4D174 169 aa19.16■□□□□ 0.66
CPNE1-216ENST00000437340 TSPOP30536 169 aa19.16■□□□□ 0.66
CPNE1-216ENST00000437340 FAM159AQ6UWV7 190 aa19.16■□□□□ 0.66
CPNE1-216ENST00000437340 DLX4Q92988 240 aaPredicted RBP19.16■□□□□ 0.66
CPNE1-216ENST00000437340 PHLDA3Q9Y5J5 127 aa19.16■□□□□ 0.66
CPNE1-216ENST00000437340 LINC01546A6NGU7 62 aa19.15■□□□□ 0.66
CPNE1-216ENST00000437340 TNFRSF6BO95407 300 aa19.15■□□□□ 0.66
CPNE1-216ENST00000437340 PET117Q6UWS5 81 aa19.15■□□□□ 0.66
CPNE1-216ENST00000437340 LINC00173Q6ZV60 143 aa19.15■□□□□ 0.66
CPNE1-216ENST00000437340 C20orf202A1L168 122 aa19.14■□□□□ 0.66
CPNE1-216ENST00000437340 HILS1P60008 231 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms