RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 HIGD1AQ9Y241 93 aa9.39□□□□□ -0.91
CDC42EP1-204ENST00000434728 LINC00588Q9Y4M8 146 aa9.39□□□□□ -0.91
CDC42EP1-204ENST00000434728 TRBV24-1A0A075B6N3 115 aa9.38□□□□□ -0.91
CDC42EP1-204ENST00000434728 EIF3GO75821 320 aaKnown RBP eCLIP9.38□□□□□ -0.91
CDC42EP1-204ENST00000434728 AKR1C3P42330 323 aa9.38□□□□□ -0.91
CDC42EP1-204ENST00000434728 UBE2G2P60604 165 aa9.38□□□□□ -0.91
CDC42EP1-204ENST00000434728 UBE2L3P68036 154 aaKnown RBP9.38□□□□□ -0.91
CDC42EP1-204ENST00000434728 ADIRFQ15847 76 aa9.38□□□□□ -0.91
CDC42EP1-204ENST00000434728 ZNF674Q2M3X9 581 aa9.38□□□□□ -0.91
CDC42EP1-204ENST00000434728 OR8A1Q8NGG7 326 aa9.38□□□□□ -0.91
CDC42EP1-204ENST00000434728 ZNF503Q96F45 646 aa9.38□□□□□ -0.91
CDC42EP1-204ENST00000434728 NOP10Q9NPE3 64 aaKnown RBP9.38□□□□□ -0.91
CDC42EP1-204ENST00000434728 TMEM14CQ9P0S9 112 aa9.38□□□□□ -0.91
CDC42EP1-204ENST00000434728 H3BRN7 92 aa9.37□□□□□ -0.91
CDC42EP1-204ENST00000434728 H7BYZ3 331 aa9.37□□□□□ -0.91
CDC42EP1-204ENST00000434728 NDUFB4O95168 129 aa9.37□□□□□ -0.91
CDC42EP1-204ENST00000434728 ELOBQ15370 118 aa9.37□□□□□ -0.91
CDC42EP1-204ENST00000434728 PATE2Q6UY27 113 aa9.37□□□□□ -0.91
CDC42EP1-204ENST00000434728 LINC01551Q86U37 167 aa9.37□□□□□ -0.91
CDC42EP1-204ENST00000434728 SHANK2-AS3Q9BTD1 123 aa9.37□□□□□ -0.91
CDC42EP1-204ENST00000434728 PAXXQ9BUH6 204 aa9.37□□□□□ -0.91
CDC42EP1-204ENST00000434728 OR51M1Q9H341 326 aa9.37□□□□□ -0.91
CDC42EP1-204ENST00000434728 Q9H8V8 135 aa9.37□□□□□ -0.91
CDC42EP1-204ENST00000434728 SCRT2Q9NQ03 307 aa9.37□□□□□ -0.91
CDC42EP1-204ENST00000434728 HSPG2P98160 4391 aa9.37□□□□□ -0.91
CDC42EP1-204ENST00000434728 TRAV9-1A0A075B6T8 112 aa9.36□□□□□ -0.91
CDC42EP1-204ENST00000434728 TRAV8-2A0A0B4J237 113 aa9.36□□□□□ -0.91
CDC42EP1-204ENST00000434728 S100PP25815 95 aa9.36□□□□□ -0.91
CDC42EP1-204ENST00000434728 CDKN1BP46527 198 aa9.36□□□□□ -0.91
CDC42EP1-204ENST00000434728 PSG3Q16557 428 aa9.36□□□□□ -0.91
CDC42EP1-204ENST00000434728 ZNF493Q6ZR52 646 aa9.36□□□□□ -0.91
CDC42EP1-204ENST00000434728 LINC00305Q7Z4B0 112 aa9.36□□□□□ -0.91
CDC42EP1-204ENST00000434728 Q8N1X5 172 aa9.36□□□□□ -0.91
CDC42EP1-204ENST00000434728 TMEM263Q8WUH6 116 aaKnown RBP9.36□□□□□ -0.91
CDC42EP1-204ENST00000434728 ISOC2Q96AB3 205 aa9.36□□□□□ -0.91
CDC42EP1-204ENST00000434728 PYGO2Q9BRQ0 406 aa9.36□□□□□ -0.91
CDC42EP1-204ENST00000434728 TRAV26-1A0A087WT03 109 aa9.35□□□□□ -0.91
CDC42EP1-204ENST00000434728 A0A0J9YY99 117 aa9.35□□□□□ -0.91
CDC42EP1-204ENST00000434728 SCO2A0A1W2PP80 73 aa9.35□□□□□ -0.91
CDC42EP1-204ENST00000434728 PLAC8L1A1L4L8 177 aa9.35□□□□□ -0.91
CDC42EP1-204ENST00000434728 S100A9P06702 114 aaKnown RBP9.35□□□□□ -0.91
CDC42EP1-204ENST00000434728 FXYD5Q96DB9 178 aa9.35□□□□□ -0.91
CDC42EP1-204ENST00000434728 SMIM12Q96EX1 92 aa9.35□□□□□ -0.91
CDC42EP1-204ENST00000434728 C17orf77Q96MU5 243 aa9.35□□□□□ -0.91
CDC42EP1-204ENST00000434728 BIN3Q9NQY0 253 aa9.35□□□□□ -0.91
CDC42EP1-204ENST00000434728 SNURFLB1AK76 121 aa9.34□□□□□ -0.91
CDC42EP1-204ENST00000434728 GGTLC3B5MD39 225 aa9.34□□□□□ -0.91
CDC42EP1-204ENST00000434728 PRB4P10163 310 aaPredicted RBP9.34□□□□□ -0.91
CDC42EP1-204ENST00000434728 KCNIP4Q6PIL6 250 aa9.34□□□□□ -0.91
CDC42EP1-204ENST00000434728 GAGE12BA1L429 117 aa9.33□□□□□ -0.92
CDC42EP1-204ENST00000434728 GAGE7O76087 117 aa9.33□□□□□ -0.92
CDC42EP1-204ENST00000434728 PFN1P07737 140 aaKnown RBP9.33□□□□□ -0.92
CDC42EP1-204ENST00000434728 OR10J4P0C629 311 aa9.33□□□□□ -0.92
CDC42EP1-204ENST00000434728 GAGE12FP0CL80 117 aa9.33□□□□□ -0.92
CDC42EP1-204ENST00000434728 GAGE12GP0CL81 117 aa9.33□□□□□ -0.92
CDC42EP1-204ENST00000434728 GAGE12IP0CL82 117 aa9.33□□□□□ -0.92
CDC42EP1-204ENST00000434728 RPL35P42766 123 aaKnown RBP9.33□□□□□ -0.92
CDC42EP1-204ENST00000434728 Q9H3A6 140 aa9.33□□□□□ -0.92
CDC42EP1-204ENST00000434728 TRBV20OR9-2A0A075B6H5 130 aa9.32□□□□□ -0.92
CDC42EP1-204ENST00000434728 A0A087X0K7 114 aa9.32□□□□□ -0.92
CDC42EP1-204ENST00000434728 TYMSP04818 313 aa9.32□□□□□ -0.92
CDC42EP1-204ENST00000434728 GNG4P50150 75 aa9.32□□□□□ -0.92
CDC42EP1-204ENST00000434728 MORN5Q5VZ52 161 aa9.32□□□□□ -0.92
CDC42EP1-204ENST00000434728 LYPD1Q8N2G4 141 aa9.32□□□□□ -0.92
CDC42EP1-204ENST00000434728 ARL6IP6Q8N6S5 226 aa9.32□□□□□ -0.92
CDC42EP1-204ENST00000434728 RNASE8Q8TDE3 154 aaKnown RBP9.32□□□□□ -0.92
CDC42EP1-204ENST00000434728 SFRP2Q96HF1 295 aa9.32□□□□□ -0.92
CDC42EP1-204ENST00000434728 TRAV5A0A0B4J249 113 aa9.31□□□□□ -0.92
CDC42EP1-204ENST00000434728 J3KRW8 73 aa9.31□□□□□ -0.92
CDC42EP1-204ENST00000434728 HIST1H1EP10412 219 aaKnown RBP9.31□□□□□ -0.92
CDC42EP1-204ENST00000434728 C5orf17Q8NAS9 161 aa9.31□□□□□ -0.92
CDC42EP1-204ENST00000434728 C20orf144Q9BQM9 153 aa9.31□□□□□ -0.92
CDC42EP1-204ENST00000434728 SLC50A1Q9BRV3 221 aa9.31□□□□□ -0.92
CDC42EP1-204ENST00000434728 DERL1Q9BUN8 251 aa9.31□□□□□ -0.92
CDC42EP1-204ENST00000434728 OTORQ9NRC9 128 aa9.31□□□□□ -0.92
CDC42EP1-204ENST00000434728 ZNF586Q9NXT0 402 aa9.31□□□□□ -0.92
CDC42EP1-204ENST00000434728 TRBV6-1A0A0K0K1D8 114 aa9.3□□□□□ -0.92
CDC42EP1-204ENST00000434728 A0A1W2PPQ1 181 aa9.3□□□□□ -0.92
CDC42EP1-204ENST00000434728 PEX7O00628 323 aa9.3□□□□□ -0.92
CDC42EP1-204ENST00000434728 EREGO14944 169 aa9.3□□□□□ -0.92
CDC42EP1-204ENST00000434728 SNRPCP09234 159 aaKnown RBP9.3□□□□□ -0.92
CDC42EP1-204ENST00000434728 CXCL1P09341 107 aa9.3□□□□□ -0.92
CDC42EP1-204ENST00000434728 NBEAP1P0C6P0 100 aa9.3□□□□□ -0.92
CDC42EP1-204ENST00000434728 PYYP10082 97 aa9.3□□□□□ -0.92
CDC42EP1-204ENST00000434728 RPS10P46783 165 aaKnown RBP9.3□□□□□ -0.92
CDC42EP1-204ENST00000434728 SUMO1P63165 101 aaKnown RBP9.3□□□□□ -0.92
CDC42EP1-204ENST00000434728 PDE6HQ13956 83 aa9.3□□□□□ -0.92
CDC42EP1-204ENST00000434728 CENPWQ5EE01 88 aa9.3□□□□□ -0.92
CDC42EP1-204ENST00000434728 BPIFA4PQ86YQ2 179 aa9.3□□□□□ -0.92
CDC42EP1-204ENST00000434728 OR10G8Q8NGN5 311 aa9.3□□□□□ -0.92
CDC42EP1-204ENST00000434728 KRTAP1-5Q9BYS1 174 aa9.3□□□□□ -0.92
CDC42EP1-204ENST00000434728 OSTCQ9NRP0 149 aa9.3□□□□□ -0.92
CDC42EP1-204ENST00000434728 KLF12Q9Y4X4 402 aa9.3□□□□□ -0.92
CDC42EP1-204ENST00000434728 TRGV2A0A075B6R0 118 aa9.29□□□□□ -0.92
CDC42EP1-204ENST00000434728 TGIF2-C20orf24A0A0A6YYL0 155 aa9.29□□□□□ -0.92
CDC42EP1-204ENST00000434728 GCGP01275 180 aa9.29□□□□□ -0.92
CDC42EP1-204ENST00000434728 S100A6P06703 90 aa9.29□□□□□ -0.92
CDC42EP1-204ENST00000434728 KRTAP10-2P60368 255 aa9.29□□□□□ -0.92
CDC42EP1-204ENST00000434728 RPL19P84098 196 aaKnown RBP9.29□□□□□ -0.92
CDC42EP1-204ENST00000434728 GFI1BQ5VTD9 330 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms