RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 WFDC10AQ9H1F0 79 aa13.4□□□□□ -0.26
HMGN1-206ENST00000431390 TRAV12-2A0A075B6T6 113 aa13.39□□□□□ -0.27
HMGN1-206ENST00000431390 IGKV3D-20A0A0C4DH25 116 aa13.39□□□□□ -0.27
HMGN1-206ENST00000431390 HIGD1CA8MV81 97 aa13.39□□□□□ -0.27
HMGN1-206ENST00000431390 NUTF2P61970 127 aaKnown RBP13.39□□□□□ -0.27
HMGN1-206ENST00000431390 SAMD5Q5TGI4 173 aa13.39□□□□□ -0.27
HMGN1-206ENST00000431390 Q6ZQT7 251 aa13.39□□□□□ -0.27
HMGN1-206ENST00000431390 GTSF1Q8WW33 167 aa13.39□□□□□ -0.27
HMGN1-206ENST00000431390 TMSB15BA0A087X1C1 80 aa13.38□□□□□ -0.27
HMGN1-206ENST00000431390 TRAV12-3A0A0B4J271 114 aa13.38□□□□□ -0.27
HMGN1-206ENST00000431390 CRXO43186 299 aaPredicted RBP13.38□□□□□ -0.27
HMGN1-206ENST00000431390 GZMBP10144 247 aa13.38□□□□□ -0.27
HMGN1-206ENST00000431390 KPRPQ5T749 579 aaPredicted RBP13.38□□□□□ -0.27
HMGN1-206ENST00000431390 ZNF575Q86XF7 245 aa13.38□□□□□ -0.27
HMGN1-206ENST00000431390 NUP35Q8NFH5 326 aa13.38□□□□□ -0.27
HMGN1-206ENST00000431390 FAM210BQ96KR6 192 aa13.38□□□□□ -0.27
HMGN1-206ENST00000431390 ZMAT5Q9UDW3 170 aaKnown RBP13.38□□□□□ -0.27
HMGN1-206ENST00000431390 FXYD7P58549 80 aa13.37□□□□□ -0.27
HMGN1-206ENST00000431390 DEFB125Q8N687 156 aa13.37□□□□□ -0.27
HMGN1-206ENST00000431390 C20orf144Q9BQM9 153 aa13.37□□□□□ -0.27
HMGN1-206ENST00000431390 NOTCH3Q9UM47 2321 aa13.37□□□□□ -0.27
HMGN1-206ENST00000431390 TYMSP04818 313 aa13.37□□□□□ -0.27
HMGN1-206ENST00000431390 EGFEM1PQ0D2K5 195 aa13.37□□□□□ -0.27
HMGN1-206ENST00000431390 ANXA2RQ3ZCQ2 193 aa13.37□□□□□ -0.27
HMGN1-206ENST00000431390 OXLD1Q5BKU9 147 aa13.37□□□□□ -0.27
HMGN1-206ENST00000431390 MORN3Q6PF18 240 aaPredicted RBP13.37□□□□□ -0.27
HMGN1-206ENST00000431390 KCNS1Q96KK3 526 aa13.37□□□□□ -0.27
HMGN1-206ENST00000431390 NAGKQ9UJ70 344 aa13.37□□□□□ -0.27
HMGN1-206ENST00000431390 IGLC6P0CF74 106 aa13.36□□□□□ -0.27
HMGN1-206ENST00000431390 RAB5AP20339 215 aa13.36□□□□□ -0.27
HMGN1-206ENST00000431390 TDRG1Q3Y452 100 aa13.36□□□□□ -0.27
HMGN1-206ENST00000431390 FAM159AQ6UWV7 190 aa13.36□□□□□ -0.27
HMGN1-206ENST00000431390 Q8N1Y9 231 aa13.36□□□□□ -0.27
HMGN1-206ENST00000431390 INSP01308 110 aa13.35□□□□□ -0.27
HMGN1-206ENST00000431390 GRIFINA4D1Z8 144 aa13.34□□□□□ -0.27
HMGN1-206ENST00000431390 MUC21Q5SSG8 566 aa13.34□□□□□ -0.27
HMGN1-206ENST00000431390 DNLZQ5SXM8 178 aa13.34□□□□□ -0.27
HMGN1-206ENST00000431390 ATP5L2Q7Z4Y8 100 aa13.34□□□□□ -0.27
HMGN1-206ENST00000431390 FER1L6-AS1Q8NA97 138 aa13.34□□□□□ -0.27
HMGN1-206ENST00000431390 MRAPQ8TCY5 172 aa13.34□□□□□ -0.27
HMGN1-206ENST00000431390 PGLYRP4Q96LB8 373 aa13.34□□□□□ -0.27
HMGN1-206ENST00000431390 CTRLP40313 264 aa13.33□□□□□ -0.28
HMGN1-206ENST00000431390 RASL11AQ6T310 242 aa13.33□□□□□ -0.28
HMGN1-206ENST00000431390 SRD5A3Q9H8P0 318 aa13.33□□□□□ -0.28
HMGN1-206ENST00000431390 IGHV1OR15-1A0A075B7D0 117 aa13.32□□□□□ -0.28
HMGN1-206ENST00000431390 F2Z2F3 143 aa13.32□□□□□ -0.28
HMGN1-206ENST00000431390 RBMY1A1P0DJD3 496 aaKnown RBP13.32□□□□□ -0.28
HMGN1-206ENST00000431390 RBMY1CP0DJD4 496 aa13.32□□□□□ -0.28
HMGN1-206ENST00000431390 MED14OSP0DP75 135 aa13.32□□□□□ -0.28
HMGN1-206ENST00000431390 RPL35AP18077 110 aaKnown RBP13.32□□□□□ -0.28
HMGN1-206ENST00000431390 RBMY1FQ15415 496 aaKnown RBP13.32□□□□□ -0.28
HMGN1-206ENST00000431390 C1QTNF4Q9BXJ3 329 aa13.32□□□□□ -0.28
HMGN1-206ENST00000431390 XCL2Q9UBD3 114 aa13.32□□□□□ -0.28
HMGN1-206ENST00000431390 KMT2CQ8NEZ4 4911 aaKnown RBP13.32□□□□□ -0.28
HMGN1-206ENST00000431390 SPINK4O60575 86 aa13.32□□□□□ -0.28
HMGN1-206ENST00000431390 ASIPP42127 132 aa13.32□□□□□ -0.28
HMGN1-206ENST00000431390 COX19Q49B96 90 aa13.32□□□□□ -0.28
HMGN1-206ENST00000431390 LYZL1Q6UWQ5 148 aa13.32□□□□□ -0.28
HMGN1-206ENST00000431390 TMEM256Q8N2U0 113 aa13.32□□□□□ -0.28
HMGN1-206ENST00000431390 BORCS7Q96B45 105 aa13.32□□□□□ -0.28
HMGN1-206ENST00000431390 LINC00467Q9BRT7 94 aa13.32□□□□□ -0.28
HMGN1-206ENST00000431390 SSBP4Q9BWG4 385 aaPredicted RBP13.32□□□□□ -0.28
HMGN1-206ENST00000431390 A0A1B0GUT8 65 aa13.31□□□□□ -0.28
HMGN1-206ENST00000431390 SNAI2O43623 268 aa13.31□□□□□ -0.28
HMGN1-206ENST00000431390 RPS10P46783 165 aaKnown RBP13.31□□□□□ -0.28
HMGN1-206ENST00000431390 MRPL54Q6P161 138 aaKnown RBP13.31□□□□□ -0.28
HMGN1-206ENST00000431390 TPPP3Q9BW30 176 aa13.31□□□□□ -0.28
HMGN1-206ENST00000431390 A0A1B0GXF2 115 aa13.3□□□□□ -0.28
HMGN1-206ENST00000431390 GIG44P09565 113 aaPredicted RBP13.3□□□□□ -0.28
HMGN1-206ENST00000431390 OR5AL1P0C617 328 aa13.3□□□□□ -0.28
HMGN1-206ENST00000431390 KRTAP10-11P60412 298 aa13.3□□□□□ -0.28
HMGN1-206ENST00000431390 CNFNQ9BYD5 112 aa13.3□□□□□ -0.28
HMGN1-206ENST00000431390 A0A1B0GW15 77 aa13.29□□□□□ -0.28
HMGN1-206ENST00000431390 GNRH2O43555 120 aa13.29□□□□□ -0.28
HMGN1-206ENST00000431390 ARMS2P0C7Q2 107 aa13.29□□□□□ -0.28
HMGN1-206ENST00000431390 S100A4P26447 101 aaKnown RBP13.29□□□□□ -0.28
HMGN1-206ENST00000431390 RIGQ13278 110 aa13.29□□□□□ -0.28
HMGN1-206ENST00000431390 WDR73Q6P4I2 378 aa13.29□□□□□ -0.28
HMGN1-206ENST00000431390 NBEAL2Q6ZNJ1 2754 aa13.29□□□□□ -0.28
HMGN1-206ENST00000431390 TRGV11A0A075B6L2 103 aa13.28□□□□□ -0.28
HMGN1-206ENST00000431390 LOC102724200A0A096LPH7 203 aaPredicted RBP13.28□□□□□ -0.28
HMGN1-206ENST00000431390 H3BVH4 76 aa13.28□□□□□ -0.28
HMGN1-206ENST00000431390 HBBP68871 147 aa13.28□□□□□ -0.28
HMGN1-206ENST00000431390 GNB1LQ9BYB4 327 aa13.28□□□□□ -0.28
HMGN1-206ENST00000431390 CSTL1Q9H114 145 aa13.28□□□□□ -0.28
HMGN1-206ENST00000431390 S100A8P05109 93 aa13.28□□□□□ -0.28
HMGN1-206ENST00000431390 RNASE3P12724 160 aaKnown RBP13.28□□□□□ -0.28
HMGN1-206ENST00000431390 C1orf158Q8N1D5 194 aa13.28□□□□□ -0.28
HMGN1-206ENST00000431390 LINC01587Q99440 93 aa13.28□□□□□ -0.28
HMGN1-206ENST00000431390 SCRT2Q9NQ03 307 aa13.28□□□□□ -0.28
HMGN1-206ENST00000431390 IGHV3-16A0A0C4DH30 117 aa13.27□□□□□ -0.29
HMGN1-206ENST00000431390 KIR2DL5BA0A0G2JN68 375 aa13.27□□□□□ -0.29
HMGN1-206ENST00000431390 KIR2DL5BA0A0G2JPC4 375 aa13.27□□□□□ -0.29
HMGN1-206ENST00000431390 MT-ND6P03923 174 aa13.27□□□□□ -0.29
HMGN1-206ENST00000431390 FRMD6-AS1P0C7T7 363 aa13.27□□□□□ -0.29
HMGN1-206ENST00000431390 KIR2DL5AQ8N109 375 aa13.27□□□□□ -0.29
HMGN1-206ENST00000431390 KIR2DL5BQ8NHK3 375 aa13.27□□□□□ -0.29
HMGN1-206ENST00000431390 TP53TG3Q9ULZ0 132 aa13.27□□□□□ -0.29
HMGN1-206ENST00000431390 GOLT1BQ9Y3E0 138 aa13.27□□□□□ -0.29
HMGN1-206ENST00000431390 CBY3A6NI87 242 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms