RNA–Protein interactions for RNA: ENST00000431120.1

GCSHP3-201, Transcript of glycine cleavage system protein H pseudogene 3, humanhuman

BASIC

Gene GCSHP3, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP3-201ENST00000431120 MBD2Q9UBB5 411 aa9.15□□□□□ -0.94
GCSHP3-201ENST00000431120 IGHV3-38A0A0C4DH36 116 aa9.14□□□□□ -0.95
GCSHP3-201ENST00000431120 SERTM2A0A1B0GWG4 89 aa9.14□□□□□ -0.95
GCSHP3-201ENST00000431120 INMT-MINDY4F8WBC2 141 aa9.14□□□□□ -0.95
GCSHP3-201ENST00000431120 UPK1BO75841 260 aa9.14□□□□□ -0.95
GCSHP3-201ENST00000431120 MPC2O95563 127 aa9.14□□□□□ -0.95
GCSHP3-201ENST00000431120 PFN1P07737 140 aaKnown RBP9.14□□□□□ -0.95
GCSHP3-201ENST00000431120 H2BFSP57053 126 aa9.14□□□□□ -0.95
GCSHP3-201ENST00000431120 LINC01556Q5JQF7 62 aa9.14□□□□□ -0.95
GCSHP3-201ENST00000431120 HYLS1Q96M11 299 aa9.14□□□□□ -0.95
GCSHP3-201ENST00000431120 SDF2L1Q9HCN8 221 aa9.14□□□□□ -0.95
GCSHP3-201ENST00000431120 NAGKQ9UJ70 344 aa9.14□□□□□ -0.95
GCSHP3-201ENST00000431120 A0A1W2PPV4 95 aa9.13□□□□□ -0.95
GCSHP3-201ENST00000431120 GATA1P15976 413 aaPredicted RBP9.13□□□□□ -0.95
GCSHP3-201ENST00000431120 RPL12P30050 165 aaKnown RBP9.13□□□□□ -0.95
GCSHP3-201ENST00000431120 ACOT6Q3I5F7 207 aaPredicted RBP9.13□□□□□ -0.95
GCSHP3-201ENST00000431120 Q5VSD8 79 aa9.13□□□□□ -0.95
GCSHP3-201ENST00000431120 MARVELD1Q9BSK0 173 aa9.13□□□□□ -0.95
GCSHP3-201ENST00000431120 TREM1Q9NP99 234 aa9.13□□□□□ -0.95
GCSHP3-201ENST00000431120 TRAV8-6A0A0B4J262 113 aa9.12□□□□□ -0.95
GCSHP3-201ENST00000431120 GNRH2O43555 120 aa9.12□□□□□ -0.95
GCSHP3-201ENST00000431120 PSCAO43653 123 aa9.12□□□□□ -0.95
GCSHP3-201ENST00000431120 TYMSP04818 313 aa9.12□□□□□ -0.95
GCSHP3-201ENST00000431120 FUSP35637 526 aaKnown RBP eCLIP9.12□□□□□ -0.95
GCSHP3-201ENST00000431120 PPT1P50897 306 aa9.12□□□□□ -0.95
GCSHP3-201ENST00000431120 GOLT1AQ6ZVE7 132 aa9.12□□□□□ -0.95
GCSHP3-201ENST00000431120 NHLRC2Q8NBF2 726 aa9.12□□□□□ -0.95
GCSHP3-201ENST00000431120 PRADC1Q9BSG0 188 aa9.12□□□□□ -0.95
GCSHP3-201ENST00000431120 NDFIP1Q9BT67 221 aa9.12□□□□□ -0.95
GCSHP3-201ENST00000431120 TMEM70Q9BUB7 260 aa9.12□□□□□ -0.95
GCSHP3-201ENST00000431120 TRBV6-4A0A1B0GX49 114 aa9.11□□□□□ -0.95
GCSHP3-201ENST00000431120 FBLL1A6NHQ2 334 aaKnown RBP9.11□□□□□ -0.95
GCSHP3-201ENST00000431120 IBA57-AS1B1ANH7 110 aa9.11□□□□□ -0.95
GCSHP3-201ENST00000431120 FAM229AH3BQW9 127 aa9.11□□□□□ -0.95
GCSHP3-201ENST00000431120 ASB13Q8WXK3 278 aa9.11□□□□□ -0.95
GCSHP3-201ENST00000431120 PTH2Q96A98 100 aa9.11□□□□□ -0.95
GCSHP3-201ENST00000431120 SH3BGRL3Q9H299 93 aa9.11□□□□□ -0.95
GCSHP3-201ENST00000431120 IGLV5-52A0A0A0MRZ9 124 aa9.1□□□□□ -0.95
GCSHP3-201ENST00000431120 LRCOL1A6NCL2 159 aa9.1□□□□□ -0.95
GCSHP3-201ENST00000431120 K7EQM0 130 aa9.1□□□□□ -0.95
GCSHP3-201ENST00000431120 TAAR5O14804 337 aa9.1□□□□□ -0.95
GCSHP3-201ENST00000431120 SSNA1O43805 119 aa9.1□□□□□ -0.95
GCSHP3-201ENST00000431120 RHOHQ15669 191 aa9.1□□□□□ -0.95
GCSHP3-201ENST00000431120 ZNF876PQ49A33 203 aa9.1□□□□□ -0.95
GCSHP3-201ENST00000431120 TVP23CQ96ET8 276 aa9.1□□□□□ -0.95
GCSHP3-201ENST00000431120 RPH3ALQ9UNE2 315 aa9.1□□□□□ -0.95
GCSHP3-201ENST00000431120 FLG2Q5D862 2391 aaPredicted RBP9.09□□□□□ -0.95
GCSHP3-201ENST00000431120 LOC100131303A0A0U1RQF7 123 aa9.09□□□□□ -0.95
GCSHP3-201ENST00000431120 RS1O15537 224 aa9.09□□□□□ -0.95
GCSHP3-201ENST00000431120 C1QBP02746 253 aa9.09□□□□□ -0.95
GCSHP3-201ENST00000431120 LAGE3Q14657 143 aa9.09□□□□□ -0.95
GCSHP3-201ENST00000431120 SLC25A29Q8N8R3 303 aa9.09□□□□□ -0.95
GCSHP3-201ENST00000431120 C5orf17Q8NAS9 161 aa9.09□□□□□ -0.95
GCSHP3-201ENST00000431120 SMIM3Q9BZL3 60 aa9.09□□□□□ -0.95
GCSHP3-201ENST00000431120 TRAV8-1A0A0A6YYK1 113 aa9.08□□□□□ -0.96
GCSHP3-201ENST00000431120 F6UZH7 168 aa9.08□□□□□ -0.96
GCSHP3-201ENST00000431120 MGST1P10620 155 aaKnown RBP9.08□□□□□ -0.96
GCSHP3-201ENST00000431120 DEFA1P59665 94 aa9.08□□□□□ -0.96
GCSHP3-201ENST00000431120 DEFA3P59666 94 aa9.08□□□□□ -0.96
GCSHP3-201ENST00000431120 OR10J3Q5JRS4 329 aa9.08□□□□□ -0.96
GCSHP3-201ENST00000431120 LELP1Q5T871 98 aa9.08□□□□□ -0.96
GCSHP3-201ENST00000431120 CFAP126Q5VTH2 177 aa9.08□□□□□ -0.96
GCSHP3-201ENST00000431120 OR10G9Q8NGN4 311 aa9.08□□□□□ -0.96
GCSHP3-201ENST00000431120 OR10G7Q8NGN6 311 aa9.08□□□□□ -0.96
GCSHP3-201ENST00000431120 MYCBP2O75592 4640 aa9.08□□□□□ -0.96
GCSHP3-201ENST00000431120 VPS13BQ7Z7G8 4022 aa9.08□□□□□ -0.96
GCSHP3-201ENST00000431120 TCRAP04437 139 aa9.07□□□□□ -0.96
GCSHP3-201ENST00000431120 RAB2AP61019 212 aa9.07□□□□□ -0.96
GCSHP3-201ENST00000431120 IFITM3Q01628 133 aa9.07□□□□□ -0.96
GCSHP3-201ENST00000431120 ZFP69Q49AA0 526 aa9.07□□□□□ -0.96
GCSHP3-201ENST00000431120 PIK3CD-AS1Q5SR53 167 aa9.07□□□□□ -0.96
GCSHP3-201ENST00000431120 Q8N814 137 aa9.07□□□□□ -0.96
GCSHP3-201ENST00000431120 OR2G3Q8NGZ4 309 aa9.07□□□□□ -0.96
GCSHP3-201ENST00000431120 SUN5Q8TC36 379 aa9.07□□□□□ -0.96
GCSHP3-201ENST00000431120 C9orf85Q96MD7 179 aa9.07□□□□□ -0.96
GCSHP3-201ENST00000431120 TM2D2Q9BX73 214 aa9.07□□□□□ -0.96
GCSHP3-201ENST00000431120 GTSF1LQ9H1H1 148 aa9.07□□□□□ -0.96
GCSHP3-201ENST00000431120 WFDC1Q9HC57 220 aa9.07□□□□□ -0.96
GCSHP3-201ENST00000431120 SRRM2Q9UQ35 2752 aaKnown RBP9.07□□□□□ -0.96
GCSHP3-201ENST00000431120 MBP02144 154 aa9.06□□□□□ -0.96
GCSHP3-201ENST00000431120 STAG3L2P0CL84 134 aa9.06□□□□□ -0.96
GCSHP3-201ENST00000431120 STAG3L3P0CL85 134 aa9.06□□□□□ -0.96
GCSHP3-201ENST00000431120 ARL14EPLP0DKL9 152 aa9.06□□□□□ -0.96
GCSHP3-201ENST00000431120 CDC34P49427 236 aaPredicted RBP9.06□□□□□ -0.96
GCSHP3-201ENST00000431120 GNG5P63218 68 aa9.06□□□□□ -0.96
GCSHP3-201ENST00000431120 SMUG1Q53HV7 270 aa9.06□□□□□ -0.96
GCSHP3-201ENST00000431120 ATP6V0E2Q8NHE4 81 aa9.06□□□□□ -0.96
GCSHP3-201ENST00000431120 EIF3GO75821 320 aaKnown RBP eCLIP9.05□□□□□ -0.96
GCSHP3-201ENST00000431120 SMR3BP02814 79 aaPredicted RBP9.05□□□□□ -0.96
GCSHP3-201ENST00000431120 SERF2P84101 59 aa9.05□□□□□ -0.96
GCSHP3-201ENST00000431120 SAPCD1Q5SSQ6 148 aa9.05□□□□□ -0.96
GCSHP3-201ENST00000431120 ZFP2Q6ZN57 461 aa9.05□□□□□ -0.96
GCSHP3-201ENST00000431120 Q6ZSN1 163 aa9.05□□□□□ -0.96
GCSHP3-201ENST00000431120 PSMG3Q9BT73 122 aaPredicted RBP9.05□□□□□ -0.96
GCSHP3-201ENST00000431120 TMEM167BQ9NRX6 74 aa9.05□□□□□ -0.96
GCSHP3-201ENST00000431120 PSG8Q9UQ74 426 aa9.05□□□□□ -0.96
GCSHP3-201ENST00000431120 GCGP01275 180 aa9.04□□□□□ -0.96
GCSHP3-201ENST00000431120 ZNF80P51504 273 aaPredicted RBP9.04□□□□□ -0.96
GCSHP3-201ENST00000431120 FLI1Q01543 452 aaPredicted RBP9.04□□□□□ -0.96
GCSHP3-201ENST00000431120 TOR2AQ5JU69 321 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms