RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 PLPP3O14495 311 aa2.85□□□□□ -1.95
HMGB3-203ENST00000430118 CA2P00918 260 aa2.85□□□□□ -1.95
HMGB3-203ENST00000430118 GYPAP02724 150 aa2.85□□□□□ -1.95
HMGB3-203ENST00000430118 KLK1P06870 262 aa2.85□□□□□ -1.95
HMGB3-203ENST00000430118 FKBP2P26885 142 aaKnown RBP2.85□□□□□ -1.95
HMGB3-203ENST00000430118 G6PCP35575 357 aa2.85□□□□□ -1.95
HMGB3-203ENST00000430118 ZNF121P58317 390 aaPredicted RBP2.85□□□□□ -1.95
HMGB3-203ENST00000430118 NOXRED1Q6NXP6 359 aa2.85□□□□□ -1.95
HMGB3-203ENST00000430118 MARCH3Q86UD3 253 aa2.85□□□□□ -1.95
HMGB3-203ENST00000430118 LHFPL1Q86WI0 220 aa2.85□□□□□ -1.95
HMGB3-203ENST00000430118 BAGE3Q86Y29 109 aa2.85□□□□□ -1.95
HMGB3-203ENST00000430118 BAGE2Q86Y30 109 aa2.85□□□□□ -1.95
HMGB3-203ENST00000430118 CEND1Q8N111 149 aa2.85□□□□□ -1.95
HMGB3-203ENST00000430118 TMEM230Q96A57 120 aa2.85□□□□□ -1.95
HMGB3-203ENST00000430118 RPEQ96AT9 228 aa2.85□□□□□ -1.95
HMGB3-203ENST00000430118 RASL11BQ9BPW5 248 aa2.85□□□□□ -1.95
HMGB3-203ENST00000430118 TXNDC17Q9BRA2 123 aa2.85□□□□□ -1.95
HMGB3-203ENST00000430118 GNB1LQ9BYB4 327 aa2.85□□□□□ -1.95
HMGB3-203ENST00000430118 TMEM191AQ9H0A3 160 aa2.85□□□□□ -1.95
HMGB3-203ENST00000430118 ENY2Q9NPA8 101 aa2.85□□□□□ -1.95
HMGB3-203ENST00000430118 POLR1DQ9Y2S0 133 aa2.85□□□□□ -1.95
HMGB3-203ENST00000430118 DNAH1Q9P2D7 4330 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 IGHV3-15A0A0B4J1V0 119 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 A0A1W2PQD3 144 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 PRSS37A4D1T9 235 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 H3BMG7 143 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 H3BUT2 72 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 J3QLW9 94 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 ZNF737O75373 536 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 OR7C1O76099 320 aaPredicted RBP2.84□□□□□ -1.95
HMGB3-203ENST00000430118 CXorf1O96002 111 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 TTRP02766 147 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 BGLAPP02818 100 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 COX8AP10176 69 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 ASIPP42127 132 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 UBE2G1P62253 170 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 CCL20P78556 96 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 MEF2CQ06413 473 aaPredicted RBP2.84□□□□□ -1.95
HMGB3-203ENST00000430118 CATR1Q13166 79 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 UNC119Q13432 240 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 CLEC12AQ5QGZ9 265 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 LCN12Q6JVE5 192 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 RASL11AQ6T310 242 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 LINC00336Q6ZUF6 198 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 CLECL1Q8IZS7 167 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 VKORC1L1Q8N0U8 176 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 C20orf203Q8NBC4 194 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 OR4X2Q8NGF9 303 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 OR10J6PQ8NGY7 276 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 LINC01006Q8NI28 216 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 EEF1AKMT3Q96AZ1 226 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 FAM3DQ96BQ1 224 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 FLYWCH2Q96CP2 140 aaKnown RBP2.84□□□□□ -1.95
HMGB3-203ENST00000430118 SH3BGRL3Q9H299 93 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 C11orf1Q9H5F2 150 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 HES4Q9HCC6 221 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 BCL2L10Q9HD36 194 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 PRO0628Q9UI54 55 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 CES1P1Q9UKY3 287 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 YTHDF2Q9Y5A9 579 aaKnown RBP2.84□□□□□ -1.95
HMGB3-203ENST00000430118 LY96Q9Y6Y9 160 aa2.84□□□□□ -1.95
HMGB3-203ENST00000430118 MED12Q93074 2177 aa2.84□□□□□ -1.96
HMGB3-203ENST00000430118 DNAH9Q9NYC9 4486 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 PCLOQ9Y6V0 5065 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 TRAV40A0A0B4J280 105 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 PIGBOS1A0A0B4J2F0 54 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 OR4C46A6NHA9 309 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 C2orf70A6NJV1 201 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 C17orf51A8MQB3 221 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 LYNX1G3V0Z9 82 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 K7EMT4 169 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 ANGPTL7O43827 346 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 SRSF10O75494 262 aaKnown RBP2.83□□□□□ -1.96
HMGB3-203ENST00000430118 CPSF4O95639 269 aaKnown RBP2.83□□□□□ -1.96
HMGB3-203ENST00000430118 OR2H2O95918 312 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 IGKV3-15P01624 115 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 IGHMP01871 453 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 HLA-DQA1P01909 254 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 PRB2P02812 416 aaPredicted RBP2.83□□□□□ -1.96
HMGB3-203ENST00000430118 MT-ATP8P03928 68 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 ATP5G1P05496 136 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 SCTP09683 121 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 IFI6P09912 130 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 CECR9P0C854 216 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 LYNX1P0DP58 116 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 IFITM1P13164 125 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 ATP5G3P48201 142 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 NCBP2P52298 156 aaKnown RBP eCLIP2.83□□□□□ -1.96
HMGB3-203ENST00000430118 SUPT4H1P63272 117 aaKnown RBP2.83□□□□□ -1.96
HMGB3-203ENST00000430118 SERF2P84101 59 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 PSG4Q00888 419 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 ATP5G2Q06055 141 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 ZNF684Q5T5D7 378 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 TEX36Q5VZQ5 186 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 DUX4L9Q6RFH8 374 aaPredicted RBP2.83□□□□□ -1.96
HMGB3-203ENST00000430118 C2orf91Q6ZV80 131 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 FAM19A5Q7Z5A7 132 aaPredicted RBP2.83□□□□□ -1.96
HMGB3-203ENST00000430118 SPATA12Q7Z6I5 190 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 BPIFA4PQ86YQ2 179 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 WDR31Q8NA23 367 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms