RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 CEND1Q8N111 149 aa9.84□□□□□ -0.83
CPNE4-201ENST00000429747 IGHV3-73A0A0B4J1V6 119 aa9.83□□□□□ -0.84
CPNE4-201ENST00000429747 IGKV3D-20A0A0C4DH25 116 aa9.83□□□□□ -0.84
CPNE4-201ENST00000429747 ZNF80P51504 273 aaPredicted RBP9.83□□□□□ -0.84
CPNE4-201ENST00000429747 BOD1L2Q8IYS8 172 aa9.83□□□□□ -0.84
CPNE4-201ENST00000429747 DLX4Q92988 240 aaPredicted RBP9.83□□□□□ -0.84
CPNE4-201ENST00000429747 PRADC1Q9BSG0 188 aa9.83□□□□□ -0.84
CPNE4-201ENST00000429747 TP53TG1Q9Y2A0 90 aa9.83□□□□□ -0.84
CPNE4-201ENST00000429747 NCOR2Q9Y618 2525 aa9.83□□□□□ -0.84
CPNE4-201ENST00000429747 TRAV8-2A0A0B4J237 113 aa9.83□□□□□ -0.84
CPNE4-201ENST00000429747 F6UB75 175 aa9.83□□□□□ -0.84
CPNE4-201ENST00000429747 VCYO14598 125 aa9.83□□□□□ -0.84
CPNE4-201ENST00000429747 NPBQ8NG41 125 aa9.83□□□□□ -0.84
CPNE4-201ENST00000429747 DUX3Q96PT4 197 aa9.83□□□□□ -0.84
CPNE4-201ENST00000429747 LINC01549A6NIU2 74 aa9.83□□□□□ -0.84
CPNE4-201ENST00000429747 A8MWV9 139 aa9.83□□□□□ -0.84
CPNE4-201ENST00000429747 IGHV4-39P01824 125 aa9.83□□□□□ -0.84
CPNE4-201ENST00000429747 CRIP1P50238 77 aa9.83□□□□□ -0.84
CPNE4-201ENST00000429747 ZNF876PQ49A33 203 aa9.82□□□□□ -0.84
CPNE4-201ENST00000429747 MYMXA0A1B0GTQ4 84 aa9.82□□□□□ -0.84
CPNE4-201ENST00000429747 BUB3O43684 328 aa9.82□□□□□ -0.84
CPNE4-201ENST00000429747 MYO9AB2RTY4 2548 aa9.82□□□□□ -0.84
CPNE4-201ENST00000429747 TEX48A0A1B0GUV7 120 aa9.82□□□□□ -0.84
CPNE4-201ENST00000429747 RAX2Q96IS3 184 aa9.82□□□□□ -0.84
CPNE4-201ENST00000429747 A0A087WX48 190 aa9.81□□□□□ -0.84
CPNE4-201ENST00000429747 NDUFS8O00217 210 aa9.81□□□□□ -0.84
CPNE4-201ENST00000429747 URB1-AS1Q96HZ7 61 aa9.81□□□□□ -0.84
CPNE4-201ENST00000429747 FAM223BA6NKX1 122 aa9.81□□□□□ -0.84
CPNE4-201ENST00000429747 CRXO43186 299 aaPredicted RBP9.81□□□□□ -0.84
CPNE4-201ENST00000429747 CD28P10747 220 aa9.81□□□□□ -0.84
CPNE4-201ENST00000429747 HOXB4P17483 251 aaPredicted RBP9.81□□□□□ -0.84
CPNE4-201ENST00000429747 C12orf74Q32Q52 190 aa9.81□□□□□ -0.84
CPNE4-201ENST00000429747 FAM223AQ8IWN6 122 aa9.81□□□□□ -0.84
CPNE4-201ENST00000429747 TET2Q6N021 2002 aaPredicted RBP9.81□□□□□ -0.84
CPNE4-201ENST00000429747 IGKV3OR2-268A0A0C4DH90 116 aa9.81□□□□□ -0.84
CPNE4-201ENST00000429747 TTC32Q5I0X7 151 aa9.81□□□□□ -0.84
CPNE4-201ENST00000429747 MEIG1Q5JSS6 88 aa9.81□□□□□ -0.84
CPNE4-201ENST00000429747 TRBV6-1A0A0K0K1D8 114 aa9.8□□□□□ -0.84
CPNE4-201ENST00000429747 A0A0U1RRA0 63 aa9.8□□□□□ -0.84
CPNE4-201ENST00000429747 IGLV2-11P01706 119 aa9.8□□□□□ -0.84
CPNE4-201ENST00000429747 HLA-DRB4P13762 266 aa9.8□□□□□ -0.84
CPNE4-201ENST00000429747 HLA-DRB4X5D2U9 266 aa9.8□□□□□ -0.84
CPNE4-201ENST00000429747 CIRBPQ14011 172 aaKnown RBP9.8□□□□□ -0.84
CPNE4-201ENST00000429747 ZNF493Q6ZR52 646 aa9.8□□□□□ -0.84
CPNE4-201ENST00000429747 ERG28Q9UKR5 140 aa9.8□□□□□ -0.84
CPNE4-201ENST00000429747 ANKRD11Q6UB99 2663 aaPredicted RBP9.8□□□□□ -0.84
CPNE4-201ENST00000429747 GNRH2O43555 120 aa9.8□□□□□ -0.84
CPNE4-201ENST00000429747 CRYGBP07316 175 aa9.8□□□□□ -0.84
CPNE4-201ENST00000429747 NPC2P61916 151 aa9.8□□□□□ -0.84
CPNE4-201ENST00000429747 DAZ1Q9NQZ3 744 aaKnown RBP9.8□□□□□ -0.84
CPNE4-201ENST00000429747 COL4A2P08572 1712 aa9.8□□□□□ -0.84
CPNE4-201ENST00000429747 SNCGO76070 127 aa9.79□□□□□ -0.84
CPNE4-201ENST00000429747 DEFB1P60022 68 aa9.79□□□□□ -0.84
CPNE4-201ENST00000429747 Q71RC1 249 aaPredicted RBP9.79□□□□□ -0.84
CPNE4-201ENST00000429747 SH2D6Q7Z4S9 175 aa9.79□□□□□ -0.84
CPNE4-201ENST00000429747 Q8N9W7 124 aa9.79□□□□□ -0.84
CPNE4-201ENST00000429747 Q8NA96 180 aa9.79□□□□□ -0.84
CPNE4-201ENST00000429747 ITLN2Q8WWU7 325 aaPredicted RBP9.79□□□□□ -0.84
CPNE4-201ENST00000429747 RPL39LQ96EH5 51 aaKnown RBP9.79□□□□□ -0.84
CPNE4-201ENST00000429747 RBX1P62877 108 aa9.79□□□□□ -0.84
CPNE4-201ENST00000429747 ODF1Q14990 250 aa9.79□□□□□ -0.84
CPNE4-201ENST00000429747 USMG5Q96IX5 58 aa9.79□□□□□ -0.84
CPNE4-201ENST00000429747 PRSS29PA6NIE9 313 aa9.79□□□□□ -0.84
CPNE4-201ENST00000429747 IGF2-ASQ6U949 168 aa9.79□□□□□ -0.84
CPNE4-201ENST00000429747 SDHAF1A6NFY7 115 aa9.78□□□□□ -0.84
CPNE4-201ENST00000429747 LINC01587Q99440 93 aa9.78□□□□□ -0.84
CPNE4-201ENST00000429747 NACAE9PAV3 2078 aa9.78□□□□□ -0.84
CPNE4-201ENST00000429747 F8W1H4 67 aa9.78□□□□□ -0.84
CPNE4-201ENST00000429747 C19orf54Q5BKX5 351 aa9.78□□□□□ -0.84
CPNE4-201ENST00000429747 TRAV12-2A0A075B6T6 113 aa9.77□□□□□ -0.85
CPNE4-201ENST00000429747 ZFP36P26651 326 aaKnown RBP9.77□□□□□ -0.85
CPNE4-201ENST00000429747 C1orf122Q6ZSJ8 110 aa9.77□□□□□ -0.85
CPNE4-201ENST00000429747 VCANP13611 3396 aa9.77□□□□□ -0.85
CPNE4-201ENST00000429747 SZT2Q5T011 3432 aa9.77□□□□□ -0.85
CPNE4-201ENST00000429747 SPINK13Q1W4C9 94 aa9.77□□□□□ -0.85
CPNE4-201ENST00000429747 SPXQ9BT56 116 aa9.77□□□□□ -0.85
CPNE4-201ENST00000429747 KLK9Q9UKQ9 250 aa9.77□□□□□ -0.85
CPNE4-201ENST00000429747 CENPVL3A0A0U1RRI6 287 aa9.76□□□□□ -0.85
CPNE4-201ENST00000429747 IGLL5B9A064 214 aa9.76□□□□□ -0.85
CPNE4-201ENST00000429747 DUSP14O95147 198 aaKnown RBP9.76□□□□□ -0.85
CPNE4-201ENST00000429747 WFDC2Q14508 124 aa9.76□□□□□ -0.85
CPNE4-201ENST00000429747 IGHV1-69DA0A0B4J2H0 117 aa9.76□□□□□ -0.85
CPNE4-201ENST00000429747 RBAKDNA6NC62 111 aa9.76□□□□□ -0.85
CPNE4-201ENST00000429747 GAGE12HA6NDE8 117 aa9.76□□□□□ -0.85
CPNE4-201ENST00000429747 IGHV1-69P01742 117 aa9.76□□□□□ -0.85
CPNE4-201ENST00000429747 AZU1P20160 251 aa9.76□□□□□ -0.85
CPNE4-201ENST00000429747 PMVKQ15126 192 aa9.76□□□□□ -0.85
CPNE4-201ENST00000429747 GNLYP22749 145 aa9.76□□□□□ -0.85
CPNE4-201ENST00000429747 NDUFA4O00483 81 aa9.75□□□□□ -0.85
CPNE4-201ENST00000429747 CKS1BP61024 79 aa9.75□□□□□ -0.85
CPNE4-201ENST00000429747 KNCNA6PVL3 124 aa9.75□□□□□ -0.85
CPNE4-201ENST00000429747 SYNJ2BPP57105 145 aa9.75□□□□□ -0.85
CPNE4-201ENST00000429747 TAL2Q16559 108 aa9.75□□□□□ -0.85
CPNE4-201ENST00000429747 LAMA1P25391 3075 aa9.75□□□□□ -0.85
CPNE4-201ENST00000429747 C9JAW5 83 aa9.75□□□□□ -0.85
CPNE4-201ENST00000429747 TMEM238C9JI98 176 aa9.75□□□□□ -0.85
CPNE4-201ENST00000429747 KLHL30-AS1Q8NEE0 82 aa9.75□□□□□ -0.85
CPNE4-201ENST00000429747 C20orf78Q9BR46 151 aa9.75□□□□□ -0.85
CPNE4-201ENST00000429747 UBE2L6O14933 153 aa9.74□□□□□ -0.85
CPNE4-201ENST00000429747 SPINK8P0C7L1 97 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms