RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	SERTM2	A0A1B0GWG4	89 aa		12.12	□□□□□ -0.47
MRPL28-203	ENST00000429738		F6UZH7	168 aa		12.12	□□□□□ -0.47
MRPL28-203	ENST00000429738	SIVA1	O15304	175 aa		12.12	□□□□□ -0.47
MRPL28-203	ENST00000429738	GNRH2	O43555	120 aa		12.12	□□□□□ -0.47
MRPL28-203	ENST00000429738	GIP	P09681	153 aa	Predicted RBP	12.12	□□□□□ -0.47
MRPL28-203	ENST00000429738	KRTAP10-2	P60368	255 aa		12.12	□□□□□ -0.47
MRPL28-203	ENST00000429738		Q6ZRN7	208 aa	Predicted RBP	12.12	□□□□□ -0.47
MRPL28-203	ENST00000429738	NAGK	Q9UJ70	344 aa		12.12	□□□□□ -0.47
MRPL28-203	ENST00000429738	TRAV4	A0A0B4J268	109 aa		12.11	□□□□□ -0.47
MRPL28-203	ENST00000429738	TRGV4	A0A0C4DH28	118 aa		12.11	□□□□□ -0.47
MRPL28-203	ENST00000429738	NXPH4	O95158	308 aa		12.11	□□□□□ -0.47
MRPL28-203	ENST00000429738	MB	P02144	154 aa		12.11	□□□□□ -0.47
MRPL28-203	ENST00000429738	TYMS	P04818	313 aa		12.11	□□□□□ -0.47
MRPL28-203	ENST00000429738	GCHFR	P30047	84 aa		12.11	□□□□□ -0.47
MRPL28-203	ENST00000429738	LINC00315	P59091	139 aa		12.11	□□□□□ -0.47
MRPL28-203	ENST00000429738	C5orf17	Q8NAS9	161 aa		12.11	□□□□□ -0.47
MRPL28-203	ENST00000429738	RNF222	A6NCQ9	220 aa		12.1	□□□□□ -0.47
MRPL28-203	ENST00000429738		K7EQD1	137 aa		12.1	□□□□□ -0.47
MRPL28-203	ENST00000429738		M0R2P5	195 aa		12.1	□□□□□ -0.47
MRPL28-203	ENST00000429738	TCRA	P04437	139 aa		12.1	□□□□□ -0.47
MRPL28-203	ENST00000429738	NEGR1	Q7Z3B1	354 aa		12.1	□□□□□ -0.47
MRPL28-203	ENST00000429738	SGK494	Q96LW2	274 aa		12.1	□□□□□ -0.47
MRPL28-203	ENST00000429738	SH3BGRL3	Q9H299	93 aa		12.1	□□□□□ -0.47
MRPL28-203	ENST00000429738	TNFSF18	Q9UNG2	199 aa		12.1	□□□□□ -0.47
MRPL28-203	ENST00000429738	IGLV2-11	P01706	119 aa		12.09	□□□□□ -0.47
MRPL28-203	ENST00000429738	KCNS1	Q96KK3	526 aa		12.09	□□□□□ -0.47
MRPL28-203	ENST00000429738	SDF2L1	Q9HCN8	221 aa		12.09	□□□□□ -0.47
MRPL28-203	ENST00000429738	FAT1	Q14517	4588 aa		12.08	□□□□□ -0.48
MRPL28-203	ENST00000429738	EPM2A	B3EWF7	344 aa		12.08	□□□□□ -0.48
MRPL28-203	ENST00000429738	GGTLC3	B5MD39	225 aa		12.08	□□□□□ -0.48
MRPL28-203	ENST00000429738	CXorf1	O96002	111 aa		12.08	□□□□□ -0.48
MRPL28-203	ENST00000429738	ORM1	P02763	201 aa		12.08	□□□□□ -0.48
MRPL28-203	ENST00000429738	ZNF80	P51504	273 aa	Predicted RBP	12.08	□□□□□ -0.48
MRPL28-203	ENST00000429738	NDFIP1	Q9BT67	221 aa		12.08	□□□□□ -0.48
MRPL28-203	ENST00000429738	TMEM167B	Q9NRX6	74 aa		12.08	□□□□□ -0.48
MRPL28-203	ENST00000429738	GYPE	P15421	78 aa		12.07	□□□□□ -0.48
MRPL28-203	ENST00000429738	SRI	P30626	198 aa		12.07	□□□□□ -0.48
MRPL28-203	ENST00000429738	SUMO1	P63165	101 aa	Known RBP	12.07	□□□□□ -0.48
MRPL28-203	ENST00000429738	RPL7L1	Q6DKI1	246 aa	Known RBP	12.07	□□□□□ -0.48
MRPL28-203	ENST00000429738	INO80E	Q8NBZ0	244 aa	Predicted RBP	12.07	□□□□□ -0.48
MRPL28-203	ENST00000429738	OR4C5	Q8NGB2	326 aa		12.07	□□□□□ -0.48
MRPL28-203	ENST00000429738	ACTR3C	Q9C0K3	210 aa	Predicted RBP	12.07	□□□□□ -0.48
MRPL28-203	ENST00000429738	C11orf21	Q9P2W6	132 aa		12.07	□□□□□ -0.48
MRPL28-203	ENST00000429738	PSG8	Q9UQ74	426 aa		12.07	□□□□□ -0.48
MRPL28-203	ENST00000429738		K7EQM0	130 aa		12.06	□□□□□ -0.48
MRPL28-203	ENST00000429738	TMEM75	Q8N9X5	138 aa		12.06	□□□□□ -0.48
MRPL28-203	ENST00000429738	EPDR1	Q9UM22	224 aa		12.06	□□□□□ -0.48
MRPL28-203	ENST00000429738		A0A1W2PRE2	83 aa		12.05	□□□□□ -0.48
MRPL28-203	ENST00000429738		C9JCJ5	164 aa		12.05	□□□□□ -0.48
MRPL28-203	ENST00000429738		G3V3Q6	166 aa		12.05	□□□□□ -0.48
MRPL28-203	ENST00000429738	GCG	P01275	180 aa		12.05	□□□□□ -0.48
MRPL28-203	ENST00000429738	PFN1	P07737	140 aa	Known RBP	12.05	□□□□□ -0.48
MRPL28-203	ENST00000429738	FLI1	Q01543	452 aa	Predicted RBP	12.05	□□□□□ -0.48
MRPL28-203	ENST00000429738	ZNF726P1	Q15940	193 aa		12.05	□□□□□ -0.48
MRPL28-203	ENST00000429738	CYB561D1	Q8N8Q1	229 aa		12.05	□□□□□ -0.48
MRPL28-203	ENST00000429738	PCNP	Q8WW12	178 aa	Known RBP	12.05	□□□□□ -0.48
MRPL28-203	ENST00000429738	FXYD6-FXYD2	A0A087WZ82	144 aa		12.04	□□□□□ -0.48
MRPL28-203	ENST00000429738	FBLL1	A6NHQ2	334 aa	Known RBP	12.04	□□□□□ -0.48
MRPL28-203	ENST00000429738	TAAR5	O14804	337 aa		12.04	□□□□□ -0.48
MRPL28-203	ENST00000429738	INAFM2	P0DMQ5	153 aa		12.04	□□□□□ -0.48
MRPL28-203	ENST00000429738	GATA1	P15976	413 aa	Predicted RBP	12.04	□□□□□ -0.48
MRPL28-203	ENST00000429738	OR2T35	Q8NGX2	323 aa		12.04	□□□□□ -0.48
MRPL28-203	ENST00000429738	C9orf85	Q96MD7	179 aa		12.04	□□□□□ -0.48
MRPL28-203	ENST00000429738	TXNDC17	Q9BRA2	123 aa		12.04	□□□□□ -0.48
MRPL28-203	ENST00000429738	BORCS7-ASMT	A0A0B4J1R7	106 aa		12.03	□□□□□ -0.48
MRPL28-203	ENST00000429738	LOC100131303	A0A0U1RQF7	123 aa		12.03	□□□□□ -0.48
MRPL28-203	ENST00000429738		K7EP13	123 aa		12.03	□□□□□ -0.48
MRPL28-203	ENST00000429738	RGS21	Q2M5E4	152 aa		12.03	□□□□□ -0.48
MRPL28-203	ENST00000429738	SMUG1	Q53HV7	270 aa		12.03	□□□□□ -0.48
MRPL28-203	ENST00000429738	WFDC10B	Q8IUB3	73 aa		12.03	□□□□□ -0.48
MRPL28-203	ENST00000429738	TNFRSF18	Q9Y5U5	241 aa		12.03	□□□□□ -0.48
MRPL28-203	ENST00000429738	LY96	Q9Y6Y9	160 aa		12.03	□□□□□ -0.48
MRPL28-203	ENST00000429738	CTXND1	A0A1B0GTU2	59 aa		12.02	□□□□□ -0.49
MRPL28-203	ENST00000429738	DNAH10OS	P0CZ25	163 aa		12.02	□□□□□ -0.49
MRPL28-203	ENST00000429738	DPPA3	Q6W0C5	159 aa		12.02	□□□□□ -0.49
MRPL28-203	ENST00000429738	PRNT	Q86SH4	94 aa		12.02	□□□□□ -0.49
MRPL28-203	ENST00000429738	PTH2	Q96A98	100 aa		12.02	□□□□□ -0.49
MRPL28-203	ENST00000429738	RS1	O15537	224 aa		12.01	□□□□□ -0.49
MRPL28-203	ENST00000429738	CIDEA	O60543	219 aa		12.01	□□□□□ -0.49
MRPL28-203	ENST00000429738	RNASE3	P12724	160 aa	Known RBP	12.01	□□□□□ -0.49
MRPL28-203	ENST00000429738	TIRAP	P58753	221 aa		12.01	□□□□□ -0.49
MRPL28-203	ENST00000429738	ZNF876P	Q49A33	203 aa		12.01	□□□□□ -0.49
MRPL28-203	ENST00000429738	ZFP69	Q49AA0	526 aa		12.01	□□□□□ -0.49
MRPL28-203	ENST00000429738	SAPCD1	Q5SSQ6	148 aa		12.01	□□□□□ -0.49
MRPL28-203	ENST00000429738	CFAP126	Q5VTH2	177 aa		12.01	□□□□□ -0.49
MRPL28-203	ENST00000429738	SH2D6	Q7Z4S9	175 aa		12.01	□□□□□ -0.49
MRPL28-203	ENST00000429738	NFE4	Q86UQ8	179 aa		12.01	□□□□□ -0.49
MRPL28-203	ENST00000429738	LINC00479	Q96M42	142 aa		12.01	□□□□□ -0.49
MRPL28-203	ENST00000429738	PGPEP1	Q9NXJ5	209 aa		12.01	□□□□□ -0.49
MRPL28-203	ENST00000429738	TRAV9-2	A0A087WT02	112 aa		12	□□□□□ -0.49
MRPL28-203	ENST00000429738	PGPEP1L	A6NFU8	196 aa		11.99	□□□□□ -0.49
MRPL28-203	ENST00000429738	SLC25A29	Q8N8R3	303 aa		11.99	□□□□□ -0.49
MRPL28-203	ENST00000429738	CYTL1	Q9NRR1	136 aa		11.99	□□□□□ -0.49
MRPL28-203	ENST00000429738	VPS13B	Q7Z7G8	4022 aa		11.99	□□□□□ -0.49
MRPL28-203	ENST00000429738	FLG2	Q5D862	2391 aa	Predicted RBP	11.99	□□□□□ -0.49
MRPL28-203	ENST00000429738	TRAV34	A0A0B4J273	112 aa		11.98	□□□□□ -0.49
MRPL28-203	ENST00000429738	IGKV3D-20	A0A0C4DH25	116 aa		11.98	□□□□□ -0.49
MRPL28-203	ENST00000429738	TRBV6-4	A0A1B0GX49	114 aa		11.98	□□□□□ -0.49
MRPL28-203	ENST00000429738	FAM74A7	A6NL05	159 aa		11.98	□□□□□ -0.49
MRPL28-203	ENST00000429738	EVI2A	P22794	236 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms