RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 ZNF80P51504 273 aaPredicted RBP10.47□□□□□ -0.73
SEC13-210ENST00000428626 ACOT6Q3I5F7 207 aaPredicted RBP10.47□□□□□ -0.73
SEC13-210ENST00000428626 PQLC2Q6ZP29 291 aa10.47□□□□□ -0.73
SEC13-210ENST00000428626 OR4C5Q8NGB2 326 aa10.47□□□□□ -0.73
SEC13-210ENST00000428626 CMTM2Q8TAZ6 248 aa10.47□□□□□ -0.73
SEC13-210ENST00000428626 TREM1Q9NP99 234 aa10.47□□□□□ -0.73
SEC13-210ENST00000428626 MSRB1Q9NZV6 116 aa10.47□□□□□ -0.73
SEC13-210ENST00000428626 TRAV21A0A0B4J279 112 aa10.46□□□□□ -0.73
SEC13-210ENST00000428626 ORM1P02763 201 aa10.46□□□□□ -0.73
SEC13-210ENST00000428626 ARL14EPLP0DKL9 152 aa10.46□□□□□ -0.73
SEC13-210ENST00000428626 GATA1P15976 413 aaPredicted RBP10.46□□□□□ -0.73
SEC13-210ENST00000428626 DPPA3Q6W0C5 159 aa10.46□□□□□ -0.73
SEC13-210ENST00000428626 NFE4Q86UQ8 179 aa10.46□□□□□ -0.73
SEC13-210ENST00000428626 OR10G9Q8NGN4 311 aa10.46□□□□□ -0.73
SEC13-210ENST00000428626 OR10G7Q8NGN6 311 aa10.46□□□□□ -0.73
SEC13-210ENST00000428626 PCNPQ8WW12 178 aaKnown RBP10.46□□□□□ -0.73
SEC13-210ENST00000428626 VPS13BQ7Z7G8 4022 aa10.45□□□□□ -0.74
SEC13-210ENST00000428626 A0A1W2PPV4 95 aa10.45□□□□□ -0.74
SEC13-210ENST00000428626 CDPF1Q6NVV7 123 aa10.45□□□□□ -0.74
SEC13-210ENST00000428626 ARL6IP6Q8N6S5 226 aa10.45□□□□□ -0.74
SEC13-210ENST00000428626 TRAV9-2A0A087WT02 112 aa10.44□□□□□ -0.74
SEC13-210ENST00000428626 C9JCJ5 164 aa10.44□□□□□ -0.74
SEC13-210ENST00000428626 IGLV2-11P01706 119 aa10.44□□□□□ -0.74
SEC13-210ENST00000428626 STAG3L2P0CL84 134 aa10.44□□□□□ -0.74
SEC13-210ENST00000428626 STAG3L3P0CL85 134 aa10.44□□□□□ -0.74
SEC13-210ENST00000428626 FAM74A1Q5RGS3 127 aa10.44□□□□□ -0.74
SEC13-210ENST00000428626 TMEM75Q8N9X5 138 aa10.44□□□□□ -0.74
SEC13-210ENST00000428626 TXNDC17Q9BRA2 123 aa10.44□□□□□ -0.74
SEC13-210ENST00000428626 SDF2L1Q9HCN8 221 aa10.44□□□□□ -0.74
SEC13-210ENST00000428626 ALG5Q9Y673 324 aa10.44□□□□□ -0.74
SEC13-210ENST00000428626 EREGO14944 169 aa10.43□□□□□ -0.74
SEC13-210ENST00000428626 CRYGDP07320 174 aa10.43□□□□□ -0.74
SEC13-210ENST00000428626 EVI2AP22794 236 aa10.43□□□□□ -0.74
SEC13-210ENST00000428626 DEFA1P59665 94 aa10.43□□□□□ -0.74
SEC13-210ENST00000428626 DEFA3P59666 94 aa10.43□□□□□ -0.74
SEC13-210ENST00000428626 HSD17B11Q8NBQ5 300 aa10.43□□□□□ -0.74
SEC13-210ENST00000428626 SUN5Q8TC36 379 aa10.43□□□□□ -0.74
SEC13-210ENST00000428626 ASB13Q8WXK3 278 aa10.43□□□□□ -0.74
SEC13-210ENST00000428626 EPM2AB3EWF7 344 aa10.42□□□□□ -0.74
SEC13-210ENST00000428626 TCRAP04437 139 aa10.42□□□□□ -0.74
SEC13-210ENST00000428626 CDC34P49427 236 aaPredicted RBP10.42□□□□□ -0.74
SEC13-210ENST00000428626 Q5BKY6 102 aa10.42□□□□□ -0.74
SEC13-210ENST00000428626 CFAP126Q5VTH2 177 aa10.42□□□□□ -0.74
SEC13-210ENST00000428626 SLC25A29Q8N8R3 303 aa10.42□□□□□ -0.74
SEC13-210ENST00000428626 OR2G3Q8NGZ4 309 aa10.42□□□□□ -0.74
SEC13-210ENST00000428626 RAB24Q969Q5 203 aa10.42□□□□□ -0.74
SEC13-210ENST00000428626 DNAH8Q96JB1 4490 aa10.41□□□□□ -0.74
SEC13-210ENST00000428626 IGHV3-73A0A0B4J1V6 119 aa10.41□□□□□ -0.74
SEC13-210ENST00000428626 LRCOL1A6NCL2 159 aa10.41□□□□□ -0.74
SEC13-210ENST00000428626 GGTLC3B5MD39 225 aa10.41□□□□□ -0.74
SEC13-210ENST00000428626 K7EP13 123 aa10.41□□□□□ -0.74
SEC13-210ENST00000428626 RS1O15537 224 aa10.41□□□□□ -0.74
SEC13-210ENST00000428626 ATP6V0CP27449 155 aa10.41□□□□□ -0.74
SEC13-210ENST00000428626 GCHFRP30047 84 aa10.41□□□□□ -0.74
SEC13-210ENST00000428626 TIRAPP58753 221 aa10.41□□□□□ -0.74
SEC13-210ENST00000428626 ZNF876PQ49A33 203 aa10.41□□□□□ -0.74
SEC13-210ENST00000428626 NHLRC2Q8NBF2 726 aa10.41□□□□□ -0.74
SEC13-210ENST00000428626 KCNS1Q96KK3 526 aa10.41□□□□□ -0.74
SEC13-210ENST00000428626 C9orf85Q96MD7 179 aa10.41□□□□□ -0.74
SEC13-210ENST00000428626 SH3BGRL3Q9H299 93 aa10.41□□□□□ -0.74
SEC13-210ENST00000428626 PSG8Q9UQ74 426 aa10.41□□□□□ -0.74
SEC13-210ENST00000428626 FLG2Q5D862 2391 aaPredicted RBP10.41□□□□□ -0.74
SEC13-210ENST00000428626 MYCBP2O75592 4640 aa10.41□□□□□ -0.74
SEC13-210ENST00000428626 IGHV3-38A0A0C4DH36 116 aa10.4□□□□□ -0.74
SEC13-210ENST00000428626 PGPEP1LA6NFU8 196 aa10.4□□□□□ -0.74
SEC13-210ENST00000428626 FBLL1A6NHQ2 334 aaKnown RBP10.4□□□□□ -0.74
SEC13-210ENST00000428626 GCGP01275 180 aa10.4□□□□□ -0.74
SEC13-210ENST00000428626 RNASE3P12724 160 aaKnown RBP10.4□□□□□ -0.74
SEC13-210ENST00000428626 HAMPP81172 84 aa10.4□□□□□ -0.74
SEC13-210ENST00000428626 C5orf17Q8NAS9 161 aa10.4□□□□□ -0.74
SEC13-210ENST00000428626 DMBT1Q9UGM3 2413 aaPredicted RBP10.39□□□□□ -0.75
SEC13-210ENST00000428626 SUMO1P63165 101 aaKnown RBP10.39□□□□□ -0.75
SEC13-210ENST00000428626 LINC01556Q5JQF7 62 aa10.39□□□□□ -0.75
SEC13-210ENST00000428626 ZNF506Q5JVG8 444 aa10.39□□□□□ -0.75
SEC13-210ENST00000428626 Q6ZSN1 163 aa10.39□□□□□ -0.75
SEC13-210ENST00000428626 AQP10Q96PS8 301 aa10.39□□□□□ -0.75
SEC13-210ENST00000428626 PSMG3Q9BT73 122 aaPredicted RBP10.39□□□□□ -0.75
SEC13-210ENST00000428626 SERTM2A0A1B0GWG4 89 aa10.38□□□□□ -0.75
SEC13-210ENST00000428626 PFN1P07737 140 aaKnown RBP10.38□□□□□ -0.75
SEC13-210ENST00000428626 PPT1P50897 306 aa10.38□□□□□ -0.75
SEC13-210ENST00000428626 FLI1Q01543 452 aaPredicted RBP10.38□□□□□ -0.75
SEC13-210ENST00000428626 Q5VSD8 79 aa10.38□□□□□ -0.75
SEC13-210ENST00000428626 SH2D6Q7Z4S9 175 aa10.38□□□□□ -0.75
SEC13-210ENST00000428626 PRNTQ86SH4 94 aa10.38□□□□□ -0.75
SEC13-210ENST00000428626 Q8N3U1 123 aa10.38□□□□□ -0.75
SEC13-210ENST00000428626 C10orf126Q8N4M7 172 aa10.38□□□□□ -0.75
SEC13-210ENST00000428626 LINC00479Q96M42 142 aa10.38□□□□□ -0.75
SEC13-210ENST00000428626 EPDR1Q9UM22 224 aa10.38□□□□□ -0.75
SEC13-210ENST00000428626 SRRM2Q9UQ35 2752 aaKnown RBP10.37□□□□□ -0.75
SEC13-210ENST00000428626 TRBV6-4A0A1B0GX49 114 aa10.37□□□□□ -0.75
SEC13-210ENST00000428626 IBA57-AS1B1ANH7 110 aa10.37□□□□□ -0.75
SEC13-210ENST00000428626 TAAR5O14804 337 aa10.37□□□□□ -0.75
SEC13-210ENST00000428626 SMR3BP02814 79 aaPredicted RBP10.37□□□□□ -0.75
SEC13-210ENST00000428626 GCSHP23434 173 aa10.37□□□□□ -0.75
SEC13-210ENST00000428626 ZNF726P1Q15940 193 aa10.37□□□□□ -0.75
SEC13-210ENST00000428626 NDFIP1Q9BT67 221 aa10.37□□□□□ -0.75
SEC13-210ENST00000428626 Q9UF83 564 aa10.37□□□□□ -0.75
SEC13-210ENST00000428626 TRAV34A0A0B4J273 112 aa10.36□□□□□ -0.75
SEC13-210ENST00000428626 IGKV3D-20A0A0C4DH25 116 aa10.36□□□□□ -0.75
SEC13-210ENST00000428626 IGHV3-30P01768 117 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms