RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 LRCOL1A6NCL2 159 aa11.1□□□□□ -0.63
VARS-216ENST00000428445 C9JCJ5 164 aa11.1□□□□□ -0.63
VARS-216ENST00000428445 INMT-MINDY4F8WBC2 141 aa11.1□□□□□ -0.63
VARS-216ENST00000428445 CIDEAO60543 219 aa11.1□□□□□ -0.63
VARS-216ENST00000428445 UPK1BO75841 260 aa11.1□□□□□ -0.63
VARS-216ENST00000428445 UBE2L3P68036 154 aaKnown RBP11.1□□□□□ -0.63
VARS-216ENST00000428445 FFAR4Q5NUL3 377 aa11.1□□□□□ -0.63
VARS-216ENST00000428445 PQLC2Q6ZP29 291 aa11.1□□□□□ -0.63
VARS-216ENST00000428445 CMTM2Q8TAZ6 248 aa11.1□□□□□ -0.63
VARS-216ENST00000428445 HYLS1Q96M11 299 aa11.1□□□□□ -0.63
VARS-216ENST00000428445 MARVELD1Q9BSK0 173 aa11.1□□□□□ -0.63
VARS-216ENST00000428445 FAM30AQ9NZY2 134 aa11.1□□□□□ -0.63
VARS-216ENST00000428445 HSPB11Q9Y547 144 aa11.1□□□□□ -0.63
VARS-216ENST00000428445 IGLV5-52A0A0A0MRZ9 124 aa11.09□□□□□ -0.63
VARS-216ENST00000428445 TRAV21A0A0B4J279 112 aa11.09□□□□□ -0.63
VARS-216ENST00000428445 PGPA6NDG6 321 aa11.09□□□□□ -0.63
VARS-216ENST00000428445 M0R2P5 195 aa11.09□□□□□ -0.63
VARS-216ENST00000428445 MPC2O95563 127 aa11.09□□□□□ -0.63
VARS-216ENST00000428445 TIRAPP58753 221 aa11.09□□□□□ -0.63
VARS-216ENST00000428445 OR4C5Q8NGB2 326 aa11.09□□□□□ -0.63
VARS-216ENST00000428445 KCNS1Q96KK3 526 aa11.09□□□□□ -0.63
VARS-216ENST00000428445 RPH3ALQ9UNE2 315 aa11.09□□□□□ -0.63
VARS-216ENST00000428445 FAM229AH3BQW9 127 aa11.08□□□□□ -0.64
VARS-216ENST00000428445 RPL12P30050 165 aaKnown RBP11.08□□□□□ -0.64
VARS-216ENST00000428445 H2BFSP57053 126 aa11.08□□□□□ -0.64
VARS-216ENST00000428445 Q9HAA7 133 aa11.08□□□□□ -0.64
VARS-216ENST00000428445 MBD2Q9UBB5 411 aa11.08□□□□□ -0.64
VARS-216ENST00000428445 A0A1W2PPV4 95 aa11.07□□□□□ -0.64
VARS-216ENST00000428445 PSCAO43653 123 aa11.07□□□□□ -0.64
VARS-216ENST00000428445 ACOT6Q3I5F7 207 aaPredicted RBP11.07□□□□□ -0.64
VARS-216ENST00000428445 NHLRC2Q8NBF2 726 aa11.07□□□□□ -0.64
VARS-216ENST00000428445 TVP23CQ96ET8 276 aa11.07□□□□□ -0.64
VARS-216ENST00000428445 IGHV3-38A0A0C4DH36 116 aa11.06□□□□□ -0.64
VARS-216ENST00000428445 SERTM2A0A1B0GWG4 89 aa11.06□□□□□ -0.64
VARS-216ENST00000428445 F6UZH7 168 aa11.06□□□□□ -0.64
VARS-216ENST00000428445 IGHV3-30P01768 117 aa11.06□□□□□ -0.64
VARS-216ENST00000428445 IGHV3-33P01772 117 aa11.06□□□□□ -0.64
VARS-216ENST00000428445 IGHV3-30-3P0DP02 117 aa11.06□□□□□ -0.64
VARS-216ENST00000428445 IGHV3-30-5P0DP03 117 aa11.06□□□□□ -0.64
VARS-216ENST00000428445 IGHV3-73A0A0B4J1V6 119 aa11.05□□□□□ -0.64
VARS-216ENST00000428445 TYMSP04818 313 aa11.05□□□□□ -0.64
VARS-216ENST00000428445 PFN1P07737 140 aaKnown RBP11.05□□□□□ -0.64
VARS-216ENST00000428445 PPT1P50897 306 aa11.05□□□□□ -0.64
VARS-216ENST00000428445 Q6ZSN1 163 aa11.05□□□□□ -0.64
VARS-216ENST00000428445 SGK494Q96LW2 274 aa11.05□□□□□ -0.64
VARS-216ENST00000428445 SDF2L1Q9HCN8 221 aa11.05□□□□□ -0.64
VARS-216ENST00000428445 TREM1Q9NP99 234 aa11.05□□□□□ -0.64
VARS-216ENST00000428445 TRAV8-1A0A0A6YYK1 113 aa11.04□□□□□ -0.64
VARS-216ENST00000428445 IBA57-AS1B1ANH7 110 aa11.04□□□□□ -0.64
VARS-216ENST00000428445 GATA1P15976 413 aaPredicted RBP11.04□□□□□ -0.64
VARS-216ENST00000428445 Q8N814 137 aa11.04□□□□□ -0.64
VARS-216ENST00000428445 SMIM3Q9BZL3 60 aa11.04□□□□□ -0.64
VARS-216ENST00000428445 SSNA1O43805 119 aa11.03□□□□□ -0.64
VARS-216ENST00000428445 GNG5P63218 68 aa11.03□□□□□ -0.64
VARS-216ENST00000428445 IFITM3Q01628 133 aa11.03□□□□□ -0.64
VARS-216ENST00000428445 WFDC2Q14508 124 aa11.03□□□□□ -0.64
VARS-216ENST00000428445 DPPA3Q6W0C5 159 aa11.03□□□□□ -0.64
VARS-216ENST00000428445 GOLT1AQ6ZVE7 132 aa11.03□□□□□ -0.64
VARS-216ENST00000428445 Q8N3U1 123 aa11.03□□□□□ -0.64
VARS-216ENST00000428445 SLC25A29Q8N8R3 303 aa11.03□□□□□ -0.64
VARS-216ENST00000428445 PTH2Q96A98 100 aa11.03□□□□□ -0.64
VARS-216ENST00000428445 HMGB3O15347 200 aaKnown RBP11.02□□□□□ -0.65
VARS-216ENST00000428445 DEFA1P59665 94 aa11.02□□□□□ -0.65
VARS-216ENST00000428445 DEFA3P59666 94 aa11.02□□□□□ -0.65
VARS-216ENST00000428445 LINC01556Q5JQF7 62 aa11.02□□□□□ -0.65
VARS-216ENST00000428445 OR10J3Q5JRS4 329 aa11.02□□□□□ -0.65
VARS-216ENST00000428445 ASB13Q8WXK3 278 aa11.02□□□□□ -0.65
VARS-216ENST00000428445 NDFIP1Q9BT67 221 aa11.02□□□□□ -0.65
VARS-216ENST00000428445 TMEM70Q9BUB7 260 aa11.02□□□□□ -0.65
VARS-216ENST00000428445 TRAV8-6A0A0B4J262 113 aa11.01□□□□□ -0.65
VARS-216ENST00000428445 TRBV6-4A0A1B0GX49 114 aa11.01□□□□□ -0.65
VARS-216ENST00000428445 J3QL48 77 aa11.01□□□□□ -0.65
VARS-216ENST00000428445 K7EQM0 130 aa11.01□□□□□ -0.65
VARS-216ENST00000428445 TAAR5O14804 337 aa11.01□□□□□ -0.65
VARS-216ENST00000428445 OR10G9Q8NGN4 311 aa11.01□□□□□ -0.65
VARS-216ENST00000428445 OR10G7Q8NGN6 311 aa11.01□□□□□ -0.65
VARS-216ENST00000428445 NTN5Q8WTR8 489 aaPredicted RBP11.01□□□□□ -0.65
VARS-216ENST00000428445 PRADC1Q9BSG0 188 aa11.01□□□□□ -0.65
VARS-216ENST00000428445 SH3BGRL3Q9H299 93 aa11.01□□□□□ -0.65
VARS-216ENST00000428445 C11orf21Q9P2W6 132 aa11.01□□□□□ -0.65
VARS-216ENST00000428445 FBLL1A6NHQ2 334 aaKnown RBP11□□□□□ -0.65
VARS-216ENST00000428445 LECT2O14960 151 aa11□□□□□ -0.65
VARS-216ENST00000428445 ZNF80P51504 273 aaPredicted RBP11□□□□□ -0.65
VARS-216ENST00000428445 ZNF876PQ49A33 203 aa11□□□□□ -0.65
VARS-216ENST00000428445 SUN5Q8TC36 379 aa11□□□□□ -0.65
VARS-216ENST00000428445 WFDC1Q9HC57 220 aa11□□□□□ -0.65
VARS-216ENST00000428445 MBP02144 154 aa10.99□□□□□ -0.65
VARS-216ENST00000428445 CFAP126Q5VTH2 177 aa10.99□□□□□ -0.65
VARS-216ENST00000428445 TMEM75Q8N9X5 138 aa10.99□□□□□ -0.65
VARS-216ENST00000428445 C5orf17Q8NAS9 161 aa10.99□□□□□ -0.65
VARS-216ENST00000428445 OR2G3Q8NGZ4 309 aa10.99□□□□□ -0.65
VARS-216ENST00000428445 RS1O15537 224 aa10.98□□□□□ -0.65
VARS-216ENST00000428445 STAG3L2P0CL84 134 aa10.98□□□□□ -0.65
VARS-216ENST00000428445 STAG3L3P0CL85 134 aa10.98□□□□□ -0.65
VARS-216ENST00000428445 SERF2P84101 59 aa10.98□□□□□ -0.65
VARS-216ENST00000428445 RHOHQ15669 191 aa10.98□□□□□ -0.65
VARS-216ENST00000428445 LINC01620Q4KN68 170 aa10.98□□□□□ -0.65
VARS-216ENST00000428445 PIK3CD-AS1Q5SR53 167 aa10.98□□□□□ -0.65
VARS-216ENST00000428445 PGPEP1LA6NFU8 196 aa10.97□□□□□ -0.65
VARS-216ENST00000428445 TCRAP04437 139 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms