RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 RNF185Q96GF1 192 aa13□□□□□ -0.33
PRDM5-203ENST00000428209 SIGLEC8Q9NYZ4 499 aa13□□□□□ -0.33
PRDM5-203ENST00000428209 PDZD2O15018 2839 aa12.99□□□□□ -0.33
PRDM5-203ENST00000428209 NCR2O95944 276 aa12.99□□□□□ -0.33
PRDM5-203ENST00000428209 LINC00173Q6ZV60 143 aa12.99□□□□□ -0.33
PRDM5-203ENST00000428209 C20orf144Q9BQM9 153 aa12.99□□□□□ -0.33
PRDM5-203ENST00000428209 TIMM8BQ9Y5J9 83 aaPredicted RBP12.99□□□□□ -0.33
PRDM5-203ENST00000428209 TRBV7-9A0A0J9YWB2 115 aa12.99□□□□□ -0.33
PRDM5-203ENST00000428209 H3BVH4 76 aa12.99□□□□□ -0.33
PRDM5-203ENST00000428209 SPANXN1Q5VSR9 72 aa12.99□□□□□ -0.33
PRDM5-203ENST00000428209 C18orf65Q6ZTR6 163 aa12.99□□□□□ -0.33
PRDM5-203ENST00000428209 NPYP01303 97 aa12.98□□□□□ -0.33
PRDM5-203ENST00000428209 ZNF688P0C7X2 276 aa12.98□□□□□ -0.33
PRDM5-203ENST00000428209 KIR3DS1Q14943 382 aa12.98□□□□□ -0.33
PRDM5-203ENST00000428209 DEFB136Q30KP8 78 aa12.98□□□□□ -0.33
PRDM5-203ENST00000428209 ATOH7Q8N100 152 aa12.98□□□□□ -0.33
PRDM5-203ENST00000428209 SNAI2O43623 268 aa12.97□□□□□ -0.33
PRDM5-203ENST00000428209 PPBPP02775 128 aa12.97□□□□□ -0.33
PRDM5-203ENST00000428209 PSMG4Q5JS54 123 aa12.97□□□□□ -0.33
PRDM5-203ENST00000428209 SMIM15Q7Z3B0 74 aa12.97□□□□□ -0.33
PRDM5-203ENST00000428209 APRG1Q8IVJ8 170 aa12.97□□□□□ -0.33
PRDM5-203ENST00000428209 EVI2AP22794 236 aa12.97□□□□□ -0.33
PRDM5-203ENST00000428209 SNRPD3P62318 126 aaKnown RBP12.97□□□□□ -0.33
PRDM5-203ENST00000428209 ITPR2Q14571 2701 aa12.97□□□□□ -0.33
PRDM5-203ENST00000428209 CACNG7P62955 275 aa12.96□□□□□ -0.33
PRDM5-203ENST00000428209 ANXA2RQ3ZCQ2 193 aa12.96□□□□□ -0.33
PRDM5-203ENST00000428209 SPATA45Q537H7 98 aa12.96□□□□□ -0.33
PRDM5-203ENST00000428209 HSPB8Q9UJY1 196 aa12.96□□□□□ -0.33
PRDM5-203ENST00000428209 DNAJC9-AS1A6NH13 148 aa12.96□□□□□ -0.34
PRDM5-203ENST00000428209 SYS1-DBNDD2H3BUS1 97 aa12.96□□□□□ -0.34
PRDM5-203ENST00000428209 TCF21O43680 179 aa12.96□□□□□ -0.34
PRDM5-203ENST00000428209 S100A4P26447 101 aaKnown RBP12.96□□□□□ -0.34
PRDM5-203ENST00000428209 SLURP1P55000 103 aa12.96□□□□□ -0.34
PRDM5-203ENST00000428209 KHDC1LQ5JSQ8 128 aa12.96□□□□□ -0.34
PRDM5-203ENST00000428209 SPATA12Q7Z6I5 190 aa12.96□□□□□ -0.34
PRDM5-203ENST00000428209 IGHV4-4A0A075B6R2 117 aa12.95□□□□□ -0.34
PRDM5-203ENST00000428209 K7EQG2 157 aa12.95□□□□□ -0.34
PRDM5-203ENST00000428209 CRXO43186 299 aaPredicted RBP12.95□□□□□ -0.34
PRDM5-203ENST00000428209 WFDC12Q8WWY7 111 aa12.95□□□□□ -0.34
PRDM5-203ENST00000428209 MAP1LC3CQ9BXW4 147 aa12.95□□□□□ -0.34
PRDM5-203ENST00000428209 GAS8-AS1O95177 125 aa12.95□□□□□ -0.34
PRDM5-203ENST00000428209 TCTEX1D4Q5JR98 221 aa12.95□□□□□ -0.34
PRDM5-203ENST00000428209 Q6ZSV7 163 aa12.95□□□□□ -0.34
PRDM5-203ENST00000428209 OR11H1Q8NG94 326 aa12.95□□□□□ -0.34
PRDM5-203ENST00000428209 ASIPP42127 132 aa12.94□□□□□ -0.34
PRDM5-203ENST00000428209 ZNF705AQ6ZN79 300 aaPredicted RBP12.94□□□□□ -0.34
PRDM5-203ENST00000428209 FOXC2Q99958 501 aa12.94□□□□□ -0.34
PRDM5-203ENST00000428209 MIEN1Q9BRT3 115 aa12.94□□□□□ -0.34
PRDM5-203ENST00000428209 KLLNB2CW77 178 aa12.94□□□□□ -0.34
PRDM5-203ENST00000428209 LINC01619G3V211 115 aa12.94□□□□□ -0.34
PRDM5-203ENST00000428209 DPF1Q92782 380 aa12.94□□□□□ -0.34
PRDM5-203ENST00000428209 MAP1LC3AQ9H492 121 aa12.94□□□□□ -0.34
PRDM5-203ENST00000428209 YAE1D1Q9NRH1 226 aa12.94□□□□□ -0.34
PRDM5-203ENST00000428209 TNFRSF6BO95407 300 aa12.93□□□□□ -0.34
PRDM5-203ENST00000428209 C4orf3Q8WVX3 66 aa12.93□□□□□ -0.34
PRDM5-203ENST00000428209 LAMTOR2Q9Y2Q5 125 aa12.93□□□□□ -0.34
PRDM5-203ENST00000428209 GNRH2O43555 120 aa12.93□□□□□ -0.34
PRDM5-203ENST00000428209 KRTAP1-1Q07627 177 aa12.93□□□□□ -0.34
PRDM5-203ENST00000428209 MAJINQ3KP22 176 aa12.93□□□□□ -0.34
PRDM5-203ENST00000428209 ADAMTSL5Q6ZMM2 481 aa12.93□□□□□ -0.34
PRDM5-203ENST00000428209 DUX3Q96PT4 197 aa12.93□□□□□ -0.34
PRDM5-203ENST00000428209 A0A0J9YX75 114 aa12.92□□□□□ -0.34
PRDM5-203ENST00000428209 C20orf202A1L168 122 aa12.92□□□□□ -0.34
PRDM5-203ENST00000428209 H0Y8G0 127 aa12.92□□□□□ -0.34
PRDM5-203ENST00000428209 SPRY2O43597 315 aa12.92□□□□□ -0.34
PRDM5-203ENST00000428209 CD5LO43866 347 aa12.92□□□□□ -0.34
PRDM5-203ENST00000428209 PHLDA3Q9Y5J5 127 aa12.92□□□□□ -0.34
PRDM5-203ENST00000428209 M0R381 172 aa12.91□□□□□ -0.34
PRDM5-203ENST00000428209 IGKV3-20P01619 116 aa12.91□□□□□ -0.34
PRDM5-203ENST00000428209 GATA1P15976 413 aaPredicted RBP12.91□□□□□ -0.34
PRDM5-203ENST00000428209 OR1N2Q8NGR9 330 aa12.91□□□□□ -0.34
PRDM5-203ENST00000428209 ZNF747Q9BV97 191 aa12.91□□□□□ -0.34
PRDM5-203ENST00000428209 ESM1Q9NQ30 184 aa12.91□□□□□ -0.34
PRDM5-203ENST00000428209 ACANP16112 2415 aa12.91□□□□□ -0.34
PRDM5-203ENST00000428209 TRAV9-2A0A087WT02 112 aa12.91□□□□□ -0.34
PRDM5-203ENST00000428209 A0A096LNJ9 63 aa12.91□□□□□ -0.34
PRDM5-203ENST00000428209 OR4C46A6NHA9 309 aa12.91□□□□□ -0.34
PRDM5-203ENST00000428209 FXYD7P58549 80 aa12.91□□□□□ -0.34
PRDM5-203ENST00000428209 PET117Q6UWS5 81 aa12.91□□□□□ -0.34
PRDM5-203ENST00000428209 KLHL30-AS1Q8NEE0 82 aa12.91□□□□□ -0.34
PRDM5-203ENST00000428209 UNC79Q9P2D8 2635 aa12.91□□□□□ -0.34
PRDM5-203ENST00000428209 HIST2H2BDQ6DRA6 164 aa12.9□□□□□ -0.34
PRDM5-203ENST00000428209 FAM159AQ6UWV7 190 aa12.9□□□□□ -0.34
PRDM5-203ENST00000428209 TRAV12-3A0A0B4J271 114 aa12.9□□□□□ -0.34
PRDM5-203ENST00000428209 MED14OSP0DP75 135 aa12.9□□□□□ -0.34
PRDM5-203ENST00000428209 LEPP41159 167 aa12.9□□□□□ -0.34
PRDM5-203ENST00000428209 PEMTQ9UBM1 199 aa12.9□□□□□ -0.34
PRDM5-203ENST00000428209 SORL1Q92673 2214 aa12.9□□□□□ -0.34
PRDM5-203ENST00000428209 TRAV26-2A0A0B4J265 109 aa12.89□□□□□ -0.35
PRDM5-203ENST00000428209 RNASE3P12724 160 aaKnown RBP12.89□□□□□ -0.35
PRDM5-203ENST00000428209 OR9G4Q8NGQ1 327 aa12.89□□□□□ -0.35
PRDM5-203ENST00000428209 ODF3Q96PU9 254 aa12.89□□□□□ -0.35
PRDM5-203ENST00000428209 MCRIP2Q9BUT9 160 aaKnown RBP12.89□□□□□ -0.35
PRDM5-203ENST00000428209 NF1P21359 2839 aa12.89□□□□□ -0.35
PRDM5-203ENST00000428209 HBDP02042 147 aa12.89□□□□□ -0.35
PRDM5-203ENST00000428209 OR2K2Q8NGT1 345 aa12.89□□□□□ -0.35
PRDM5-203ENST00000428209 SCRT2Q9NQ03 307 aa12.89□□□□□ -0.35
PRDM5-203ENST00000428209 C7orf71A4D174 169 aa12.88□□□□□ -0.35
PRDM5-203ENST00000428209 NXT2Q9NPJ8 142 aaKnown RBP12.88□□□□□ -0.35
PRDM5-203ENST00000428209 IGLC3P0DOY3 106 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms