RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 ASB13Q8WXK3 278 aa12.62□□□□□ -0.39
PSPC1-202ENST00000427943 NDFIP1Q9BT67 221 aa12.62□□□□□ -0.39
PSPC1-202ENST00000427943 ACTR3CQ9C0K3 210 aaPredicted RBP12.62□□□□□ -0.39
PSPC1-202ENST00000427943 SDF2L1Q9HCN8 221 aa12.62□□□□□ -0.39
PSPC1-202ENST00000427943 TNFSF18Q9UNG2 199 aa12.62□□□□□ -0.39
PSPC1-202ENST00000427943 SERTM2A0A1B0GWG4 89 aa12.61□□□□□ -0.39
PSPC1-202ENST00000427943 SIVA1O15304 175 aa12.61□□□□□ -0.39
PSPC1-202ENST00000427943 CXorf1O96002 111 aa12.61□□□□□ -0.39
PSPC1-202ENST00000427943 LINC00315P59091 139 aa12.61□□□□□ -0.39
PSPC1-202ENST00000427943 SUMO1P63165 101 aaKnown RBP12.61□□□□□ -0.39
PSPC1-202ENST00000427943 MRPL23Q16540 153 aaKnown RBP12.61□□□□□ -0.39
PSPC1-202ENST00000427943 OR2T35Q8NGX2 323 aa12.61□□□□□ -0.39
PSPC1-202ENST00000427943 PCLOQ9Y6V0 5065 aa12.6□□□□□ -0.39
PSPC1-202ENST00000427943 BORCS7-ASMTA0A0B4J1R7 106 aa12.6□□□□□ -0.39
PSPC1-202ENST00000427943 TRAV4A0A0B4J268 109 aa12.6□□□□□ -0.39
PSPC1-202ENST00000427943 K7EQD1 137 aa12.6□□□□□ -0.39
PSPC1-202ENST00000427943 M0R2P5 195 aa12.6□□□□□ -0.39
PSPC1-202ENST00000427943 ZNF80P51504 273 aaPredicted RBP12.6□□□□□ -0.39
PSPC1-202ENST00000427943 LYPD5Q6UWN5 251 aa12.6□□□□□ -0.39
PSPC1-202ENST00000427943 TMEM167BQ9NRX6 74 aa12.6□□□□□ -0.39
PSPC1-202ENST00000427943 PSG8Q9UQ74 426 aa12.6□□□□□ -0.39
PSPC1-202ENST00000427943 K7EQM0 130 aa12.59□□□□□ -0.39
PSPC1-202ENST00000427943 GYPEP15421 78 aa12.59□□□□□ -0.39
PSPC1-202ENST00000427943 SRIP30626 198 aa12.59□□□□□ -0.39
PSPC1-202ENST00000427943 ZNF726P1Q15940 193 aa12.59□□□□□ -0.39
PSPC1-202ENST00000427943 NEGR1Q7Z3B1 354 aa12.59□□□□□ -0.39
PSPC1-202ENST00000427943 SPATA12Q7Z6I5 190 aa12.59□□□□□ -0.39
PSPC1-202ENST00000427943 PRNTQ86SH4 94 aa12.59□□□□□ -0.39
PSPC1-202ENST00000427943 OR4C5Q8NGB2 326 aa12.59□□□□□ -0.39
PSPC1-202ENST00000427943 PCNPQ8WW12 178 aaKnown RBP12.59□□□□□ -0.39
PSPC1-202ENST00000427943 KCNS1Q96KK3 526 aa12.59□□□□□ -0.39
PSPC1-202ENST00000427943 C11orf21Q9P2W6 132 aa12.59□□□□□ -0.39
PSPC1-202ENST00000427943 G3V3Q6 166 aa12.58□□□□□ -0.4
PSPC1-202ENST00000427943 GCGP01275 180 aa12.58□□□□□ -0.4
PSPC1-202ENST00000427943 IGLV2-11P01706 119 aa12.58□□□□□ -0.4
PSPC1-202ENST00000427943 FLI1Q01543 452 aaPredicted RBP12.58□□□□□ -0.4
PSPC1-202ENST00000427943 CYB561D1Q8N8Q1 229 aa12.58□□□□□ -0.4
PSPC1-202ENST00000427943 TMEM75Q8N9X5 138 aa12.58□□□□□ -0.4
PSPC1-202ENST00000427943 EPDR1Q9UM22 224 aa12.58□□□□□ -0.4
PSPC1-202ENST00000427943 LOC100131303A0A0U1RQF7 123 aa12.57□□□□□ -0.4
PSPC1-202ENST00000427943 RGS21Q2M5E4 152 aa12.57□□□□□ -0.4
PSPC1-202ENST00000427943 CTXND1A0A1B0GTU2 59 aa12.56□□□□□ -0.4
PSPC1-202ENST00000427943 C9JCJ5 164 aa12.56□□□□□ -0.4
PSPC1-202ENST00000427943 ORM1P02763 201 aa12.56□□□□□ -0.4
PSPC1-202ENST00000427943 FGF8P55075 233 aaPredicted RBP12.56□□□□□ -0.4
PSPC1-202ENST00000427943 UBE2G2P60604 165 aa12.56□□□□□ -0.4
PSPC1-202ENST00000427943 ZFP69Q49AA0 526 aa12.56□□□□□ -0.4
PSPC1-202ENST00000427943 WFDC10BQ8IUB3 73 aa12.56□□□□□ -0.4
PSPC1-202ENST00000427943 ARPC5O15511 151 aa12.55□□□□□ -0.4
PSPC1-202ENST00000427943 PFN1P07737 140 aaKnown RBP12.55□□□□□ -0.4
PSPC1-202ENST00000427943 SMUG1Q53HV7 270 aa12.55□□□□□ -0.4
PSPC1-202ENST00000427943 Q6ZRN7 208 aaPredicted RBP12.55□□□□□ -0.4
PSPC1-202ENST00000427943 LINC00479Q96M42 142 aa12.55□□□□□ -0.4
PSPC1-202ENST00000427943 TNFRSF18Q9Y5U5 241 aa12.55□□□□□ -0.4
PSPC1-202ENST00000427943 TRAV34A0A0B4J273 112 aa12.54□□□□□ -0.4
PSPC1-202ENST00000427943 A0A1W2PRE2 83 aa12.54□□□□□ -0.4
PSPC1-202ENST00000427943 TAAR5O14804 337 aa12.54□□□□□ -0.4
PSPC1-202ENST00000427943 BTF3P20290 206 aaKnown RBP12.54□□□□□ -0.4
PSPC1-202ENST00000427943 KRTAP10-2P60368 255 aa12.54□□□□□ -0.4
PSPC1-202ENST00000427943 AKR1C8PQ5T2L2 129 aa12.54□□□□□ -0.4
PSPC1-202ENST00000427943 RYR1P21817 5038 aa12.54□□□□□ -0.4
PSPC1-202ENST00000427943 SMLR1H3BR10 107 aa12.53□□□□□ -0.4
PSPC1-202ENST00000427943 IFNA7P01567 189 aa12.53□□□□□ -0.4
PSPC1-202ENST00000427943 GATA1P15976 413 aaPredicted RBP12.53□□□□□ -0.4
PSPC1-202ENST00000427943 ZNF876PQ49A33 203 aa12.53□□□□□ -0.4
PSPC1-202ENST00000427943 DPPA3Q6W0C5 159 aa12.53□□□□□ -0.4
PSPC1-202ENST00000427943 C9orf85Q96MD7 179 aa12.53□□□□□ -0.4
PSPC1-202ENST00000427943 TXNDC17Q9BRA2 123 aa12.53□□□□□ -0.4
PSPC1-202ENST00000427943 LY96Q9Y6Y9 160 aa12.53□□□□□ -0.4
PSPC1-202ENST00000427943 FBLL1A6NHQ2 334 aaKnown RBP12.52□□□□□ -0.41
PSPC1-202ENST00000427943 NHLRC2Q8NBF2 726 aa12.52□□□□□ -0.41
PSPC1-202ENST00000427943 ARL2-SNX15V9GYD0 113 aa12.52□□□□□ -0.41
PSPC1-202ENST00000427943 IGHV3-73A0A0B4J1V6 119 aa12.51□□□□□ -0.41
PSPC1-202ENST00000427943 PGPEP1LA6NFU8 196 aa12.51□□□□□ -0.41
PSPC1-202ENST00000427943 PEX7O00628 323 aa12.51□□□□□ -0.41
PSPC1-202ENST00000427943 RNASE3P12724 160 aaKnown RBP12.51□□□□□ -0.41
PSPC1-202ENST00000427943 ZNF506Q5JVG8 444 aa12.51□□□□□ -0.41
PSPC1-202ENST00000427943 SAPCD1Q5SSQ6 148 aa12.51□□□□□ -0.41
PSPC1-202ENST00000427943 CFAP126Q5VTH2 177 aa12.51□□□□□ -0.41
PSPC1-202ENST00000427943 Q86TA4 180 aa12.51□□□□□ -0.41
PSPC1-202ENST00000427943 CYTL1Q9NRR1 136 aa12.51□□□□□ -0.41
PSPC1-202ENST00000427943 MAP1LC3B2A6NCE7 125 aa12.5□□□□□ -0.41
PSPC1-202ENST00000427943 FAM74A7A6NL05 159 aa12.5□□□□□ -0.41
PSPC1-202ENST00000427943 RS1O15537 224 aa12.5□□□□□ -0.41
PSPC1-202ENST00000427943 KRTAP4-5Q9BYR2 181 aa12.5□□□□□ -0.41
PSPC1-202ENST00000427943 MAP1LC3BQ9GZQ8 125 aa12.5□□□□□ -0.41
PSPC1-202ENST00000427943 CDK2AP2O75956 126 aa12.49□□□□□ -0.41
PSPC1-202ENST00000427943 PPT1P50897 306 aa12.49□□□□□ -0.41
PSPC1-202ENST00000427943 SLC25A29Q8N8R3 303 aa12.49□□□□□ -0.41
PSPC1-202ENST00000427943 IGKV3D-20A0A0C4DH25 116 aa12.48□□□□□ -0.41
PSPC1-202ENST00000427943 FUSP35637 526 aaKnown RBP eCLIP12.48□□□□□ -0.41
PSPC1-202ENST00000427943 TRAV9-2A0A087WT02 112 aa12.47□□□□□ -0.41
PSPC1-202ENST00000427943 DNAH10OSP0CZ25 163 aa12.47□□□□□ -0.41
PSPC1-202ENST00000427943 EVI2AP22794 236 aa12.47□□□□□ -0.41
PSPC1-202ENST00000427943 S100A4P26447 101 aaKnown RBP12.47□□□□□ -0.41
PSPC1-202ENST00000427943 ERVFC1-1P60608 527 aa12.47□□□□□ -0.41
PSPC1-202ENST00000427943 RHOHQ15669 191 aa12.47□□□□□ -0.41
PSPC1-202ENST00000427943 MSRB1Q9NZV6 116 aa12.47□□□□□ -0.41
PSPC1-202ENST00000427943 HSPG2P98160 4391 aa12.47□□□□□ -0.41
PSPC1-202ENST00000427943 LRP1BQ9NZR2 4599 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms