RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 TIMD4Q96H15 378 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 CLEC5AQ9NY25 188 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 ZNRD1Q9P1U0 126 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 CTSZQ9UBR2 303 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 K7EQD1 137 aa3.77□□□□□ -1.81
LINC00458-202ENST00000427299 SIVA1O15304 175 aa3.77□□□□□ -1.81
LINC00458-202ENST00000427299 CD5LO43866 347 aa3.77□□□□□ -1.81
LINC00458-202ENST00000427299 NDUFA3O95167 84 aa3.77□□□□□ -1.81
LINC00458-202ENST00000427299 IGF1P05019 195 aa3.77□□□□□ -1.81
LINC00458-202ENST00000427299 IL4P05112 153 aa3.77□□□□□ -1.81
LINC00458-202ENST00000427299 HLA-DRB4P13762 266 aa3.77□□□□□ -1.81
LINC00458-202ENST00000427299 CDKN1BP46527 198 aa3.77□□□□□ -1.81
LINC00458-202ENST00000427299 ARF6P62330 175 aa3.77□□□□□ -1.81
LINC00458-202ENST00000427299 RHOGP84095 191 aa3.77□□□□□ -1.81
LINC00458-202ENST00000427299 SRSF6Q13247 344 aaKnown RBP3.77□□□□□ -1.81
LINC00458-202ENST00000427299 UTF1Q5T230 341 aa3.77□□□□□ -1.81
LINC00458-202ENST00000427299 BVES-AS1Q5T3Y7 98 aa3.77□□□□□ -1.81
LINC00458-202ENST00000427299 GDF5OSQ5U4N7 250 aa3.77□□□□□ -1.81
LINC00458-202ENST00000427299 LCN12Q6JVE5 192 aa3.77□□□□□ -1.81
LINC00458-202ENST00000427299 UNQ5815/PRO19632Q6UWF5 114 aa3.77□□□□□ -1.81
LINC00458-202ENST00000427299 KIR3DL3Q8N743 410 aa3.77□□□□□ -1.81
LINC00458-202ENST00000427299 PRSS33Q8NF86 280 aa3.77□□□□□ -1.81
LINC00458-202ENST00000427299 OR4X2Q8NGF9 303 aa3.77□□□□□ -1.81
LINC00458-202ENST00000427299 ZC2HC1AQ96GY0 325 aa3.77□□□□□ -1.81
LINC00458-202ENST00000427299 ZNF414Q96IQ9 312 aa3.77□□□□□ -1.81
LINC00458-202ENST00000427299 SLC50A1Q9BRV3 221 aa3.77□□□□□ -1.81
LINC00458-202ENST00000427299 MAP1LC3AQ9H492 121 aa3.77□□□□□ -1.81
LINC00458-202ENST00000427299 MRPL36Q9P0J6 103 aaKnown RBP3.77□□□□□ -1.81
LINC00458-202ENST00000427299 RABAC1Q9UI14 185 aa3.77□□□□□ -1.81
LINC00458-202ENST00000427299 PSG8Q9UQ74 426 aa3.77□□□□□ -1.81
LINC00458-202ENST00000427299 HLA-DRB4X5D2U9 266 aa3.77□□□□□ -1.81
LINC00458-202ENST00000427299 OTOGLQ3ZCN5 2332 aa3.77□□□□□ -1.81
LINC00458-202ENST00000427299 SPENQ96T58 3664 aaKnown RBP3.76□□□□□ -1.81
LINC00458-202ENST00000427299 TMEM189A5PLL7 270 aa3.76□□□□□ -1.81
LINC00458-202ENST00000427299 RBAKDNA6NC62 111 aa3.76□□□□□ -1.81
LINC00458-202ENST00000427299 E7EUB6 86 aa3.76□□□□□ -1.81
LINC00458-202ENST00000427299 K7EIM0 57 aa3.76□□□□□ -1.81
LINC00458-202ENST00000427299 ARMS2P0C7Q2 107 aa3.76□□□□□ -1.81
LINC00458-202ENST00000427299 COX7A1P24310 79 aa3.76□□□□□ -1.81
LINC00458-202ENST00000427299 TMEM97Q5BJF2 176 aa3.76□□□□□ -1.81
LINC00458-202ENST00000427299 MINOS1Q5TGZ0 78 aa3.76□□□□□ -1.81
LINC00458-202ENST00000427299 NPBQ8NG41 125 aa3.76□□□□□ -1.81
LINC00458-202ENST00000427299 OR5A1Q8NGJ0 315 aa3.76□□□□□ -1.81
LINC00458-202ENST00000427299 C11orf45Q8TAV5 145 aa3.76□□□□□ -1.81
LINC00458-202ENST00000427299 ARPC1AQ92747 370 aa3.76□□□□□ -1.81
LINC00458-202ENST00000427299 PRELID3AQ96N28 172 aa3.76□□□□□ -1.81
LINC00458-202ENST00000427299 FBXL15Q9H469 300 aa3.76□□□□□ -1.81
LINC00458-202ENST00000427299 Q9HAA7 133 aa3.76□□□□□ -1.81
LINC00458-202ENST00000427299 NXT2Q9NPJ8 142 aaKnown RBP3.76□□□□□ -1.81
LINC00458-202ENST00000427299 MINOS1-NBL1R4GNA1 71 aa3.76□□□□□ -1.81
LINC00458-202ENST00000427299 GPR179Q6PRD1 2367 aa3.76□□□□□ -1.81
LINC00458-202ENST00000427299 POLEQ07864 2286 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 AGRNO00468 2067 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 CELSR3Q9NYQ7 3312 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 IGLV11-55A0A075B6I3 123 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 TRAV8-1A0A0A6YYK1 113 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 IGHV3-72A0A0B4J1Y9 119 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 WI2-2373I1.2A0A1W2PRP0 233 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 C7orf71A4D174 169 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 ODF3BA8MYP8 253 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 D6R8Y8 96 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 SH2D1AO60880 128 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 ATP5LO75964 103 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 IGKV1-17P01599 117 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 IGHV3-48P01763 117 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 DIAPH2-AS1Q14236 149 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 C5orf64Q2M2E5 130 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 FBXL19-AS1Q494R0 122 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 MPV17L2Q567V2 206 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 FAM104BQ5XKR9 115 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 LYPD2Q6UXB3 125 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 EXOC3-AS1Q8N2X6 119 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 ZNF491Q8N8L2 437 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 FER1L6-AS1Q8NA97 138 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 OR11H6Q8NGC7 330 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 PIFOQ8TCI5 191 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 CNFNQ9BYD5 112 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 C21orf62Q9NYP8 219 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 DPM3Q9P2X0 92 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 SMPXQ9UHP9 88 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 CHTOPQ9Y3Y2 248 aaKnown RBP3.75□□□□□ -1.81
LINC00458-202ENST00000427299 U3KQK5 164 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 PKDREJQ9NTG1 2253 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 FRYQ5TBA9 3013 aa3.75□□□□□ -1.81
LINC00458-202ENST00000427299 IGHV3-38A0A0C4DH36 116 aa3.74□□□□□ -1.81
LINC00458-202ENST00000427299 MUC21A0A0G2JKD1 596 aa3.74□□□□□ -1.81
LINC00458-202ENST00000427299 MUC21A0A140T8X8 626 aa3.74□□□□□ -1.81
LINC00458-202ENST00000427299 LINC01549A6NIU2 74 aa3.74□□□□□ -1.81
LINC00458-202ENST00000427299 E7EQL1 145 aa3.74□□□□□ -1.81
LINC00458-202ENST00000427299 H3BRM9 83 aa3.74□□□□□ -1.81
LINC00458-202ENST00000427299 TAX1BP3O14907 124 aa3.74□□□□□ -1.81
LINC00458-202ENST00000427299 MRPS12O15235 138 aaKnown RBP3.74□□□□□ -1.81
LINC00458-202ENST00000427299 CCL25O15444 150 aa3.74□□□□□ -1.81
LINC00458-202ENST00000427299 ZNF207O43670 478 aaKnown RBP3.74□□□□□ -1.81
LINC00458-202ENST00000427299 CNTFRP26992 372 aa3.74□□□□□ -1.81
LINC00458-202ENST00000427299 CKS2P33552 79 aa3.74□□□□□ -1.81
LINC00458-202ENST00000427299 LY6DQ14210 128 aa3.74□□□□□ -1.81
LINC00458-202ENST00000427299 HES1Q14469 280 aa3.74□□□□□ -1.81
LINC00458-202ENST00000427299 MUC21Q5SSG8 566 aa3.74□□□□□ -1.81
LINC00458-202ENST00000427299 CLEC2AQ6UVW9 174 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms