RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 MORN2Q502X0 79 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 TIMM23BQ5SRD1 257 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 AKR1C8PQ5T2L2 129 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 FAM162BQ5T6X4 162 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 HEPN1Q6WQI6 88 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 Q6ZS92 163 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 CYP2G1PQ6ZSU1 146 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 SSX8Q7RTT4 187 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 STX12Q86Y82 276 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 RPP25LQ8N5L8 163 aaKnown RBP1.09□□□□□ -2.23
PTPRC-208ENST00000427110 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.09□□□□□ -2.23
PTPRC-208ENST00000427110 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.09□□□□□ -2.23
PTPRC-208ENST00000427110 ZNF439Q8NDP4 499 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 FDCSPQ8NFU4 85 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 OR10D4PQ8NGN7 298 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 OR51H1Q8NH63 302 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 FAM213BQ8TBF2 198 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 NEK7Q8TDX7 302 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 SFT2D1Q8WV19 159 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 MUCL1Q96DR8 90 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 OR4C12Q96R67 309 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 ZNF251Q9BRH9 671 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 TCEAL7Q9BRU2 100 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 ADAT1Q9BUB4 502 aaKnown RBP1.09□□□□□ -2.23
PTPRC-208ENST00000427110 TMEM147Q9BVK8 224 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 GGACTQ9BVM4 153 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 SMIM3Q9BZL3 60 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 WDR61Q9GZS3 305 aaKnown RBP1.09□□□□□ -2.23
PTPRC-208ENST00000427110 EIF5A2Q9GZV4 153 aaKnown RBP1.09□□□□□ -2.23
PTPRC-208ENST00000427110 SH3BGRL3Q9H299 93 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 MANBALQ9NQG1 85 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 RPRMQ9NS64 109 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 PSENENQ9NZ42 101 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 NAT8Q9UHE5 227 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 JPT1Q9UK76 154 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 TRAPPC2LQ9UL33 140 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 WASHC3Q9Y3C0 194 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 ZFHX4Q86UP3 3567 aa1.09□□□□□ -2.24
PTPRC-208ENST00000427110 DSPP15924 2871 aaKnown RBP1.09□□□□□ -2.24
PTPRC-208ENST00000427110 PRRC2CQ9Y520 2896 aaKnown RBP1.09□□□□□ -2.24
PTPRC-208ENST00000427110 PLXNB1O43157 2135 aa1.09□□□□□ -2.24
PTPRC-208ENST00000427110 ZNF292O60281 2723 aa1.09□□□□□ -2.24
PTPRC-208ENST00000427110 NAV3Q8IVL0 2385 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 ACACAQ13085 2346 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 TRAV9-1A0A075B6T8 112 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 IGHV1-18A0A0C4DH31 117 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 MAP1LC3B2A6NCE7 125 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 C17orf98A8MV24 154 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 C17orf112F2Z3M2 114 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 M0R036 132 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 CYB5BO43169 146 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 SLC25A20O43772 301 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 GGCTO75223 188 aaKnown RBP1.08□□□□□ -2.24
PTPRC-208ENST00000427110 LYZL6O75951 148 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 S1PR2O95136 353 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 IFNA1P01562 189 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 IFNA17P01571 189 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 HBZP02008 142 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 TYMSP04818 313 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 S100A6P06703 90 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 CXCL1P09341 107 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 METTL15P1P0C7V9 234 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 OR13C7P0DN81 318 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 BCL2P10415 239 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 ZNF22P17026 224 aaPredicted RBP1.08□□□□□ -2.24
PTPRC-208ENST00000427110 S100PP25815 95 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 G6PCP35575 357 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 GABRA2P47869 451 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 CDC34P49427 236 aaPredicted RBP1.08□□□□□ -2.24
PTPRC-208ENST00000427110 ZNF137PP52743 207 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 SPCS3P61009 180 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 ERVS71-1P61550 626 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 HSPE1P61604 102 aaKnown RBP1.08□□□□□ -2.24
PTPRC-208ENST00000427110 RUNX1Q01196 453 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 AESQ08117 197 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 SLC38A11Q08AI6 406 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 TMEM267Q0VDI3 215 aaPredicted RBP1.08□□□□□ -2.24
PTPRC-208ENST00000427110 FABP9Q0Z7S8 132 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 SMIM21Q3B7S5 101 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 ACOT6Q3I5F7 207 aaPredicted RBP1.08□□□□□ -2.24
PTPRC-208ENST00000427110 KRTAP21-2Q3LI59 83 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 SPANXN5Q5MJ07 72 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 TEX36Q5VZQ5 186 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 SPNS3Q6ZMD2 512 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 ZNF826PQ6ZT77 177 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 SCXQ7RTU7 201 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 FAM24BQ8N5W8 94 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 LINC00311Q8N616 119 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 DEFB124Q8NES8 71 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 OR10P1Q8NGE3 313 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 RNASE11Q8TAA1 199 aaKnown RBP1.08□□□□□ -2.24
PTPRC-208ENST00000427110 RNASEH2CQ8TDP1 164 aaKnown RBP1.08□□□□□ -2.24
PTPRC-208ENST00000427110 Q8WTZ3 238 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 ZCCHC13Q8WW36 166 aaKnown RBP1.08□□□□□ -2.24
PTPRC-208ENST00000427110 BTF3L4Q96K17 158 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 C20orf166-AS1Q96NR2 134 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 GAFA1Q96PS6 74 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 IMMP2LQ96T52 175 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 C12orf57Q99622 126 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 NPCDR1Q9BY65 106 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms