RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 LYRM9A8MSI8 78 aa17.33■□□□□ 0.36
APOE-202ENST00000425718 ORM1P02763 201 aa17.33■□□□□ 0.36
APOE-202ENST00000425718 TRBV20OR9-2A0A075B6H5 130 aa17.32■□□□□ 0.36
APOE-202ENST00000425718 SPART-AS1P0CW21 52 aa17.32■□□□□ 0.36
APOE-202ENST00000425718 EDA2RQ9HAV5 297 aa17.32■□□□□ 0.36
APOE-202ENST00000425718 TP53TG3Q9ULZ0 132 aa17.32■□□□□ 0.36
APOE-202ENST00000425718 LINC00862A6NCI5 91 aa17.31■□□□□ 0.36
APOE-202ENST00000425718 IGLV2-8P01709 118 aa17.31■□□□□ 0.36
APOE-202ENST00000425718 AZU1P20160 251 aa17.31■□□□□ 0.36
APOE-202ENST00000425718 LINC01559Q495D7 138 aa17.31■□□□□ 0.36
APOE-202ENST00000425718 PRR27Q6MZM9 219 aa17.31■□□□□ 0.36
APOE-202ENST00000425718 SPXQ9BT56 116 aa17.31■□□□□ 0.36
APOE-202ENST00000425718 CXorf65A6NEN9 183 aa17.3■□□□□ 0.36
APOE-202ENST00000425718 B4DEV8 164 aa17.3■□□□□ 0.36
APOE-202ENST00000425718 CRIP1P50238 77 aa17.3■□□□□ 0.36
APOE-202ENST00000425718 EMP1P54849 157 aa17.3■□□□□ 0.36
APOE-202ENST00000425718 TCL1AP56279 114 aa17.3■□□□□ 0.36
APOE-202ENST00000425718 SRSF3P84103 164 aaKnown RBP17.3■□□□□ 0.36
APOE-202ENST00000425718 DAZ2Q13117 558 aaKnown RBP17.3■□□□□ 0.36
APOE-202ENST00000425718 TMEM241Q24JQ0 296 aa17.3■□□□□ 0.36
APOE-202ENST00000425718 XKRY2A2RUG3 117 aa17.29■□□□□ 0.36
APOE-202ENST00000425718 TYMSP04818 313 aa17.29■□□□□ 0.36
APOE-202ENST00000425718 CXCL1P09341 107 aa17.29■□□□□ 0.36
APOE-202ENST00000425718 Q6ZQT7 251 aa17.29■□□□□ 0.36
APOE-202ENST00000425718 OCC1Q8TAD7 63 aa17.29■□□□□ 0.36
APOE-202ENST00000425718 C11orf45Q8TAV5 145 aa17.29■□□□□ 0.36
APOE-202ENST00000425718 WWC2-AS2Q96NR7 200 aa17.29■□□□□ 0.36
APOE-202ENST00000425718 NAT8Q9UHE5 227 aa17.29■□□□□ 0.36
APOE-202ENST00000425718 DEFB4AO15263 64 aa17.28■□□□□ 0.36
APOE-202ENST00000425718 S100A4P26447 101 aaKnown RBP17.28■□□□□ 0.36
APOE-202ENST00000425718 RPS20P60866 119 aaKnown RBP17.28■□□□□ 0.36
APOE-202ENST00000425718 OR5I1Q13606 314 aa17.28■□□□□ 0.36
APOE-202ENST00000425718 COMMD7Q86VX2 200 aa17.28■□□□□ 0.36
APOE-202ENST00000425718 DKK2Q9UBU2 259 aa17.28■□□□□ 0.36
APOE-202ENST00000425718 KRBOX1C9JBD0 128 aa17.27■□□□□ 0.36
APOE-202ENST00000425718 C9JQL5 133 aa17.27■□□□□ 0.36
APOE-202ENST00000425718 P01737 135 aa17.27■□□□□ 0.36
APOE-202ENST00000425718 ASIPP42127 132 aa17.27■□□□□ 0.36
APOE-202ENST00000425718 DNLZQ5SXM8 178 aa17.27■□□□□ 0.36
APOE-202ENST00000425718 C11orf72Q8NBR9 251 aa17.27■□□□□ 0.36
APOE-202ENST00000425718 IGHV3-16A0A0C4DH30 117 aa17.26■□□□□ 0.35
APOE-202ENST00000425718 PLAC8L1A1L4L8 177 aa17.26■□□□□ 0.35
APOE-202ENST00000425718 PRM2P04554 102 aa17.26■□□□□ 0.35
APOE-202ENST00000425718 SFTA3P0C7M3 94 aa17.26■□□□□ 0.35
APOE-202ENST00000425718 LGALS9BQ3B8N2 356 aa17.26■□□□□ 0.35
APOE-202ENST00000425718 FAM222AQ5U5X8 452 aa17.26■□□□□ 0.35
APOE-202ENST00000425718 GSN-AS1Q9NRJ2 163 aa17.26■□□□□ 0.35
APOE-202ENST00000425718 C11orf21Q9P2W6 132 aa17.26■□□□□ 0.35
APOE-202ENST00000425718 IGKV3D-20A0A0C4DH25 116 aa17.25■□□□□ 0.35
APOE-202ENST00000425718 C19orf71A6NCJ1 209 aa17.25■□□□□ 0.35
APOE-202ENST00000425718 PGPEP1LA6NFU8 196 aa17.25■□□□□ 0.35
APOE-202ENST00000425718 LINC01551Q86U37 167 aa17.25■□□□□ 0.35
APOE-202ENST00000425718 NOP10Q9NPE3 64 aaKnown RBP17.25■□□□□ 0.35
APOE-202ENST00000425718 M0R036 132 aa17.24■□□□□ 0.35
APOE-202ENST00000425718 GNRH2O43555 120 aa17.24■□□□□ 0.35
APOE-202ENST00000425718 FAM231DQ6ZW35 169 aa17.24■□□□□ 0.35
APOE-202ENST00000425718 NDUFAF3Q9BU61 184 aa17.24■□□□□ 0.35
APOE-202ENST00000425718 MED14OSP0DP75 135 aa17.23■□□□□ 0.35
APOE-202ENST00000425718 DAD1P61803 113 aa17.23■□□□□ 0.35
APOE-202ENST00000425718 IL36BQ9NZH7 164 aa17.23■□□□□ 0.35
APOE-202ENST00000425718 K7EN84 100 aa17.22■□□□□ 0.35
APOE-202ENST00000425718 M0R2P5 195 aa17.22■□□□□ 0.35
APOE-202ENST00000425718 PNRC1Q12796 327 aaPredicted RBP17.22■□□□□ 0.35
APOE-202ENST00000425718 C15orf54Q8N8G6 183 aa17.22■□□□□ 0.35
APOE-202ENST00000425718 MDFICQ9P1T7 246 aa17.22■□□□□ 0.35
APOE-202ENST00000425718 SPINK4O60575 86 aa17.21■□□□□ 0.35
APOE-202ENST00000425718 ERVFC1-1P60608 527 aa17.21■□□□□ 0.35
APOE-202ENST00000425718 OR2D3Q8NGH3 330 aa17.21■□□□□ 0.35
APOE-202ENST00000425718 PTH2Q96A98 100 aa17.21■□□□□ 0.35
APOE-202ENST00000425718 ADIRFQ15847 76 aa17.2■□□□□ 0.34
APOE-202ENST00000425718 PIK3CD-AS1Q5SR53 167 aa17.2■□□□□ 0.34
APOE-202ENST00000425718 NUDT10Q8NFP7 164 aa17.2■□□□□ 0.34
APOE-202ENST00000425718 NUDT11Q96G61 164 aa17.2■□□□□ 0.34
APOE-202ENST00000425718 C9orf85Q96MD7 179 aa17.2■□□□□ 0.34
APOE-202ENST00000425718 RPP21Q9H633 154 aaKnown RBP17.2■□□□□ 0.34
APOE-202ENST00000425718 OSTCQ9NRP0 149 aa17.2■□□□□ 0.34
APOE-202ENST00000425718 CELA1Q9UNI1 258 aa17.2■□□□□ 0.34
APOE-202ENST00000425718 TRGV1A0A0A0MS02 117 aa17.19■□□□□ 0.34
APOE-202ENST00000425718 TMEM218A2RU14 115 aa17.19■□□□□ 0.34
APOE-202ENST00000425718 GATCO43716 136 aaKnown RBP17.19■□□□□ 0.34
APOE-202ENST00000425718 RPL23P62829 140 aaKnown RBP17.19■□□□□ 0.34
APOE-202ENST00000425718 LINC00612Q8N6U2 182 aa17.19■□□□□ 0.34
APOE-202ENST00000425718 C18orf15Q96N68 181 aa17.19■□□□□ 0.34
APOE-202ENST00000425718 TMSB15BA0A087X1C1 80 aa17.18■□□□□ 0.34
APOE-202ENST00000425718 RNASE3P12724 160 aaKnown RBP17.18■□□□□ 0.34
APOE-202ENST00000425718 CT83Q5H943 113 aa17.18■□□□□ 0.34
APOE-202ENST00000425718 SYT8Q8NBV8 401 aa17.18■□□□□ 0.34
APOE-202ENST00000425718 RASL10AQ92737 203 aa17.18■□□□□ 0.34
APOE-202ENST00000425718 A0A1W2PPQ1 181 aa17.17■□□□□ 0.34
APOE-202ENST00000425718 C12orf74Q32Q52 190 aa17.17■□□□□ 0.34
APOE-202ENST00000425718 ISOC2Q96AB3 205 aa17.17■□□□□ 0.34
APOE-202ENST00000425718 MUC4Q99102 2169 aa17.17■□□□□ 0.34
APOE-202ENST00000425718 RNASE7Q9H1E1 156 aaKnown RBP17.17■□□□□ 0.34
APOE-202ENST00000425718 PHLDA3Q9Y5J5 127 aa17.17■□□□□ 0.34
APOE-202ENST00000425718 TRGV2A0A075B6R0 118 aa17.16■□□□□ 0.34
APOE-202ENST00000425718 A8MWL6 223 aa17.16■□□□□ 0.34
APOE-202ENST00000425718 F8W036 122 aa17.16■□□□□ 0.34
APOE-202ENST00000425718 H3BVH4 76 aa17.16■□□□□ 0.34
APOE-202ENST00000425718 DEFB130BP0DP73 79 aa17.16■□□□□ 0.34
APOE-202ENST00000425718 DEFB130AP0DP74 79 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms