RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 H3BNG1 76 aa8.82□□□□□ -1
SGCE-203ENST00000425444 TCRAP04437 139 aa8.82□□□□□ -1
SGCE-203ENST00000425444 AKR1C8PQ5T2L2 129 aa8.82□□□□□ -1
SGCE-203ENST00000425444 SGK494Q96LW2 274 aa8.82□□□□□ -1
SGCE-203ENST00000425444 MDFICQ9P1T7 246 aa8.82□□□□□ -1
SGCE-203ENST00000425444 CTXND1A0A1B0GTU2 59 aa8.81□□□□□ -1
SGCE-203ENST00000425444 TAAR5O14804 337 aa8.81□□□□□ -1
SGCE-203ENST00000425444 PAX4O43316 350 aa8.81□□□□□ -1
SGCE-203ENST00000425444 SUMO1P63165 101 aaKnown RBP8.81□□□□□ -1
SGCE-203ENST00000425444 ZFP69Q49AA0 526 aa8.81□□□□□ -1
SGCE-203ENST00000425444 SDF2L1Q9HCN8 221 aa8.81□□□□□ -1
SGCE-203ENST00000425444 ICOSQ9Y6W8 199 aa8.81□□□□□ -1
SGCE-203ENST00000425444 TRGV4A0A0C4DH28 118 aa8.8□□□□□ -1
SGCE-203ENST00000425444 GGTLC3B5MD39 225 aa8.8□□□□□ -1
SGCE-203ENST00000425444 G3V3Q6 166 aa8.8□□□□□ -1
SGCE-203ENST00000425444 SMLR1H3BR10 107 aa8.8□□□□□ -1
SGCE-203ENST00000425444 SUN5Q8TC36 379 aa8.8□□□□□ -1
SGCE-203ENST00000425444 TVP23CQ96ET8 276 aa8.8□□□□□ -1
SGCE-203ENST00000425444 VSIG2Q96IQ7 327 aa8.8□□□□□ -1
SGCE-203ENST00000425444 SPXQ9BT56 116 aa8.8□□□□□ -1
SGCE-203ENST00000425444 PRO0255Q9UI72 69 aa8.8□□□□□ -1
SGCE-203ENST00000425444 EPDR1Q9UM22 224 aa8.8□□□□□ -1
SGCE-203ENST00000425444 HMCN2Q8NDA2 5059 aa8.8□□□□□ -1
SGCE-203ENST00000425444 A0A096LPF7 62 aa8.79□□□□□ -1
SGCE-203ENST00000425444 IFNA7P01567 189 aa8.79□□□□□ -1
SGCE-203ENST00000425444 SLAQ13239 276 aa8.79□□□□□ -1
SGCE-203ENST00000425444 ESRGQ1W209 222 aa8.79□□□□□ -1
SGCE-203ENST00000425444 TDRG1Q3Y452 100 aa8.79□□□□□ -1
SGCE-203ENST00000425444 TTC32Q5I0X7 151 aa8.79□□□□□ -1
SGCE-203ENST00000425444 SPATA12Q7Z6I5 190 aa8.79□□□□□ -1
SGCE-203ENST00000425444 PRNTQ86SH4 94 aa8.79□□□□□ -1
SGCE-203ENST00000425444 C6orf223Q8N319 242 aa8.79□□□□□ -1
SGCE-203ENST00000425444 CYB561D1Q8N8Q1 229 aa8.79□□□□□ -1
SGCE-203ENST00000425444 KCNS1Q96KK3 526 aa8.79□□□□□ -1
SGCE-203ENST00000425444 C8orf49Q96NF6 230 aa8.79□□□□□ -1
SGCE-203ENST00000425444 Q9H8V8 135 aa8.79□□□□□ -1
SGCE-203ENST00000425444 PSG8Q9UQ74 426 aa8.79□□□□□ -1
SGCE-203ENST00000425444 MRPS16Q9Y3D3 137 aaKnown RBP8.79□□□□□ -1
SGCE-203ENST00000425444 IGHV3-16A0A0C4DH30 117 aa8.78□□□□□ -1
SGCE-203ENST00000425444 A0A1W2PRE2 83 aa8.78□□□□□ -1
SGCE-203ENST00000425444 GNRH2O43555 120 aa8.78□□□□□ -1
SGCE-203ENST00000425444 TYMSP04818 313 aa8.78□□□□□ -1
SGCE-203ENST00000425444 SFTA3P0C7M3 94 aa8.78□□□□□ -1
SGCE-203ENST00000425444 FGF8P55075 233 aaPredicted RBP8.78□□□□□ -1
SGCE-203ENST00000425444 UBE2G2P60604 165 aa8.78□□□□□ -1
SGCE-203ENST00000425444 FLI1Q01543 452 aaPredicted RBP8.78□□□□□ -1
SGCE-203ENST00000425444 ZNF726P1Q15940 193 aa8.78□□□□□ -1
SGCE-203ENST00000425444 TMEM75Q8N9X5 138 aa8.78□□□□□ -1
SGCE-203ENST00000425444 PCNPQ8WW12 178 aaKnown RBP8.78□□□□□ -1
SGCE-203ENST00000425444 UPK3BQ9BT76 320 aa8.78□□□□□ -1
SGCE-203ENST00000425444 HHLA3Q9XRX5 114 aa8.78□□□□□ -1
SGCE-203ENST00000425444 FBLL1A6NHQ2 334 aaKnown RBP8.77□□□□□ -1.01
SGCE-203ENST00000425444 M0R2P5 195 aa8.77□□□□□ -1.01
SGCE-203ENST00000425444 GCGP01275 180 aa8.77□□□□□ -1.01
SGCE-203ENST00000425444 PPT1P50897 306 aa8.77□□□□□ -1.01
SGCE-203ENST00000425444 CRYBA4P53673 196 aa8.77□□□□□ -1.01
SGCE-203ENST00000425444 FHL2Q14192 279 aa8.77□□□□□ -1.01
SGCE-203ENST00000425444 SMUG1Q53HV7 270 aa8.77□□□□□ -1.01
SGCE-203ENST00000425444 RASL10AQ92737 203 aa8.77□□□□□ -1.01
SGCE-203ENST00000425444 ZNF479Q96JC4 524 aa8.77□□□□□ -1.01
SGCE-203ENST00000425444 MAP1LC3B2A6NCE7 125 aa8.76□□□□□ -1.01
SGCE-203ENST00000425444 PFN1P07737 140 aaKnown RBP8.76□□□□□ -1.01
SGCE-203ENST00000425444 OR4C5Q8NGB2 326 aa8.76□□□□□ -1.01
SGCE-203ENST00000425444 MAP1LC3BQ9GZQ8 125 aa8.76□□□□□ -1.01
SGCE-203ENST00000425444 CYTL1Q9NRR1 136 aa8.76□□□□□ -1.01
SGCE-203ENST00000425444 TRAV4A0A0B4J268 109 aa8.75□□□□□ -1.01
SGCE-203ENST00000425444 TRAV34A0A0B4J273 112 aa8.75□□□□□ -1.01
SGCE-203ENST00000425444 C9JCJ5 164 aa8.75□□□□□ -1.01
SGCE-203ENST00000425444 PEX7O00628 323 aa8.75□□□□□ -1.01
SGCE-203ENST00000425444 IGLV2-11P01706 119 aa8.75□□□□□ -1.01
SGCE-203ENST00000425444 SRIP30626 198 aa8.75□□□□□ -1.01
SGCE-203ENST00000425444 ZNF80P51504 273 aaPredicted RBP8.75□□□□□ -1.01
SGCE-203ENST00000425444 ZNF345Q14585 488 aa8.75□□□□□ -1.01
SGCE-203ENST00000425444 MRPL23Q16540 153 aaKnown RBP8.75□□□□□ -1.01
SGCE-203ENST00000425444 SAPCD1Q5SSQ6 148 aa8.75□□□□□ -1.01
SGCE-203ENST00000425444 LCE2DQ5TA82 110 aaPredicted RBP8.75□□□□□ -1.01
SGCE-203ENST00000425444 KCNRGQ8N5I3 272 aa8.75□□□□□ -1.01
SGCE-203ENST00000425444 STOML3Q8TAV4 291 aa8.75□□□□□ -1.01
SGCE-203ENST00000425444 NKX6-2Q9C056 277 aaPredicted RBP8.75□□□□□ -1.01
SGCE-203ENST00000425444 KANTRA0A1W2PQU2 76 aa8.74□□□□□ -1.01
SGCE-203ENST00000425444 FAM74A7A6NL05 159 aa8.74□□□□□ -1.01
SGCE-203ENST00000425444 J3QL48 77 aa8.74□□□□□ -1.01
SGCE-203ENST00000425444 GYPEP15421 78 aa8.74□□□□□ -1.01
SGCE-203ENST00000425444 ZNF876PQ49A33 203 aa8.74□□□□□ -1.01
SGCE-203ENST00000425444 NEGR1Q7Z3B1 354 aa8.74□□□□□ -1.01
SGCE-203ENST00000425444 HIST1H2BAQ96A08 127 aa8.74□□□□□ -1.01
SGCE-203ENST00000425444 LINC00479Q96M42 142 aa8.74□□□□□ -1.01
SGCE-203ENST00000425444 ZNF471Q9BX82 626 aaPredicted RBP8.74□□□□□ -1.01
SGCE-203ENST00000425444 ARL2-SNX15V9GYD0 113 aa8.74□□□□□ -1.01
SGCE-203ENST00000425444 A0A1W2PPQ1 181 aa8.73□□□□□ -1.01
SGCE-203ENST00000425444 SIVA1O15304 175 aa8.73□□□□□ -1.01
SGCE-203ENST00000425444 NXPH4O95158 308 aa8.73□□□□□ -1.01
SGCE-203ENST00000425444 ORM1P02763 201 aa8.73□□□□□ -1.01
SGCE-203ENST00000425444 UBE2G1P62253 170 aa8.73□□□□□ -1.01
SGCE-203ENST00000425444 Q5VSD8 79 aa8.73□□□□□ -1.01
SGCE-203ENST00000425444 Q86TA4 180 aa8.73□□□□□ -1.01
SGCE-203ENST00000425444 KRTAP1-5Q9BYS1 174 aa8.73□□□□□ -1.01
SGCE-203ENST00000425444 C11orf21Q9P2W6 132 aa8.73□□□□□ -1.01
SGCE-203ENST00000425444 A0A0D9SG52 128 aa8.72□□□□□ -1.01
SGCE-203ENST00000425444 HMSDA8MTL9 139 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms