RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 RASL10AQ92737 203 aa12.33□□□□□ -0.44
SBDSP1-202ENST00000423945 LINC00479Q96M42 142 aa12.33□□□□□ -0.44
SBDSP1-202ENST00000423945 SPXQ9BT56 116 aa12.33□□□□□ -0.44
SBDSP1-202ENST00000423945 KRTAP17-1Q9BYP8 105 aa12.33□□□□□ -0.44
SBDSP1-202ENST00000423945 PRSS29PA6NIE9 313 aa12.32□□□□□ -0.44
SBDSP1-202ENST00000423945 HMSDA8MTL9 139 aa12.32□□□□□ -0.44
SBDSP1-202ENST00000423945 UBE2G2P60604 165 aa12.32□□□□□ -0.44
SBDSP1-202ENST00000423945 TMEM75Q8N9X5 138 aa12.32□□□□□ -0.44
SBDSP1-202ENST00000423945 ZNF479Q96JC4 524 aa12.32□□□□□ -0.44
SBDSP1-202ENST00000423945 DNAH11Q96DT5 4516 aa12.31□□□□□ -0.44
SBDSP1-202ENST00000423945 FAM74A7A6NL05 159 aa12.31□□□□□ -0.44
SBDSP1-202ENST00000423945 SFTA3P0C7M3 94 aa12.31□□□□□ -0.44
SBDSP1-202ENST00000423945 FHITP49789 147 aa12.31□□□□□ -0.44
SBDSP1-202ENST00000423945 PRNTQ86SH4 94 aa12.31□□□□□ -0.44
SBDSP1-202ENST00000423945 TRAV34A0A0B4J273 112 aa12.3□□□□□ -0.44
SBDSP1-202ENST00000423945 MAP1LC3B2A6NCE7 125 aa12.3□□□□□ -0.44
SBDSP1-202ENST00000423945 K7EQM0 130 aa12.3□□□□□ -0.44
SBDSP1-202ENST00000423945 GCGP01275 180 aa12.3□□□□□ -0.44
SBDSP1-202ENST00000423945 CRYBA4P53673 196 aa12.3□□□□□ -0.44
SBDSP1-202ENST00000423945 NDFIP1Q9BT67 221 aa12.3□□□□□ -0.44
SBDSP1-202ENST00000423945 UPK3BQ9BT76 320 aa12.3□□□□□ -0.44
SBDSP1-202ENST00000423945 KRTAP1-5Q9BYS1 174 aa12.3□□□□□ -0.44
SBDSP1-202ENST00000423945 MAP1LC3BQ9GZQ8 125 aa12.3□□□□□ -0.44
SBDSP1-202ENST00000423945 KIAA1109Q2LD37 5005 aa12.29□□□□□ -0.44
SBDSP1-202ENST00000423945 PAX4O43316 350 aa12.29□□□□□ -0.44
SBDSP1-202ENST00000423945 C1orf134Q5TEV5 83 aa12.29□□□□□ -0.44
SBDSP1-202ENST00000423945 Q9H8V8 135 aa12.29□□□□□ -0.44
SBDSP1-202ENST00000423945 SDF2L1Q9HCN8 221 aa12.29□□□□□ -0.44
SBDSP1-202ENST00000423945 PRO0255Q9UI72 69 aa12.29□□□□□ -0.44
SBDSP1-202ENST00000423945 MRPS16Q9Y3D3 137 aaKnown RBP12.29□□□□□ -0.44
SBDSP1-202ENST00000423945 M0R2P5 195 aa12.28□□□□□ -0.44
SBDSP1-202ENST00000423945 SMUG1Q53HV7 270 aa12.28□□□□□ -0.44
SBDSP1-202ENST00000423945 KCNS1Q96KK3 526 aa12.28□□□□□ -0.44
SBDSP1-202ENST00000423945 HHLA3Q9XRX5 114 aa12.28□□□□□ -0.44
SBDSP1-202ENST00000423945 PEX7O00628 323 aa12.27□□□□□ -0.45
SBDSP1-202ENST00000423945 BCL2L11O43521 198 aa12.27□□□□□ -0.45
SBDSP1-202ENST00000423945 PFN1P07737 140 aaKnown RBP12.27□□□□□ -0.45
SBDSP1-202ENST00000423945 SEC11BP0C7V7 166 aa12.27□□□□□ -0.45
SBDSP1-202ENST00000423945 ARL2-SNX15V9GYD0 113 aa12.27□□□□□ -0.45
SBDSP1-202ENST00000423945 TRAV4A0A0B4J268 109 aa12.26□□□□□ -0.45
SBDSP1-202ENST00000423945 A0A0D9SG52 128 aa12.26□□□□□ -0.45
SBDSP1-202ENST00000423945 FBLL1A6NHQ2 334 aaKnown RBP12.26□□□□□ -0.45
SBDSP1-202ENST00000423945 IFNA7P01567 189 aa12.26□□□□□ -0.45
SBDSP1-202ENST00000423945 Q86TA4 180 aa12.26□□□□□ -0.45
SBDSP1-202ENST00000423945 ICOSQ9Y6W8 199 aa12.26□□□□□ -0.45
SBDSP1-202ENST00000423945 TRGV4A0A0C4DH28 118 aa12.25□□□□□ -0.45
SBDSP1-202ENST00000423945 SLAQ13239 276 aa12.25□□□□□ -0.45
SBDSP1-202ENST00000423945 SAPCD1Q5SSQ6 148 aa12.25□□□□□ -0.45
SBDSP1-202ENST00000423945 DPPA3Q6W0C5 159 aa12.25□□□□□ -0.45
SBDSP1-202ENST00000423945 C6orf223Q8N319 242 aa12.25□□□□□ -0.45
SBDSP1-202ENST00000423945 MBD3L1Q8WWY6 194 aa12.25□□□□□ -0.45
SBDSP1-202ENST00000423945 C9orf85Q96MD7 179 aa12.25□□□□□ -0.45
SBDSP1-202ENST00000423945 ZNF471Q9BX82 626 aaPredicted RBP12.25□□□□□ -0.45
SBDSP1-202ENST00000423945 NKX6-2Q9C056 277 aaPredicted RBP12.25□□□□□ -0.45
SBDSP1-202ENST00000423945 IGKV3D-20A0A0C4DH25 116 aa12.24□□□□□ -0.45
SBDSP1-202ENST00000423945 RNASE3P12724 160 aaKnown RBP12.24□□□□□ -0.45
SBDSP1-202ENST00000423945 CRIP1P50238 77 aa12.24□□□□□ -0.45
SBDSP1-202ENST00000423945 ZFP69Q49AA0 526 aa12.24□□□□□ -0.45
SBDSP1-202ENST00000423945 SOHLH1Q5JUK2 328 aa12.24□□□□□ -0.45
SBDSP1-202ENST00000423945 FAM213BQ8TBF2 198 aa12.24□□□□□ -0.45
SBDSP1-202ENST00000423945 HIST1H2BAQ96A08 127 aa12.24□□□□□ -0.45
SBDSP1-202ENST00000423945 KANTRA0A1W2PQU2 76 aa12.23□□□□□ -0.45
SBDSP1-202ENST00000423945 K7EQD1 137 aa12.23□□□□□ -0.45
SBDSP1-202ENST00000423945 TNP2Q05952 138 aa12.23□□□□□ -0.45
SBDSP1-202ENST00000423945 TMUB2Q71RG4 321 aa12.23□□□□□ -0.45
SBDSP1-202ENST00000423945 OR4C5Q8NGB2 326 aa12.23□□□□□ -0.45
SBDSP1-202ENST00000423945 LOC100131303A0A0U1RQF7 123 aa12.22□□□□□ -0.45
SBDSP1-202ENST00000423945 PGPEP1LA6NFU8 196 aa12.22□□□□□ -0.45
SBDSP1-202ENST00000423945 UMAD1C9J7I0 102 aa12.22□□□□□ -0.45
SBDSP1-202ENST00000423945 C9JCJ5 164 aa12.22□□□□□ -0.45
SBDSP1-202ENST00000423945 PPT1P50897 306 aa12.22□□□□□ -0.45
SBDSP1-202ENST00000423945 MRPL23Q16540 153 aaKnown RBP12.22□□□□□ -0.45
SBDSP1-202ENST00000423945 LYPD5Q6UWN5 251 aa12.22□□□□□ -0.45
SBDSP1-202ENST00000423945 COX8CQ7Z4L0 72 aa12.22□□□□□ -0.45
SBDSP1-202ENST00000423945 STOML3Q8TAV4 291 aa12.22□□□□□ -0.45
SBDSP1-202ENST00000423945 SFT2D1Q8WV19 159 aa12.22□□□□□ -0.45
SBDSP1-202ENST00000423945 ZC2HC1AQ96GY0 325 aa12.22□□□□□ -0.45
SBDSP1-202ENST00000423945 A0A1B0GV50 99 aa12.21□□□□□ -0.45
SBDSP1-202ENST00000423945 PAGE4O60829 102 aa12.21□□□□□ -0.45
SBDSP1-202ENST00000423945 GYPEP15421 78 aa12.21□□□□□ -0.45
SBDSP1-202ENST00000423945 GATA1P15976 413 aaPredicted RBP12.21□□□□□ -0.45
SBDSP1-202ENST00000423945 ZNF575Q86XF7 245 aa12.21□□□□□ -0.45
SBDSP1-202ENST00000423945 TRBV6-1A0A0K0K1D8 114 aa12.2□□□□□ -0.46
SBDSP1-202ENST00000423945 FABP5P3A8MUU1 101 aa12.2□□□□□ -0.46
SBDSP1-202ENST00000423945 RS1O15537 224 aa12.2□□□□□ -0.46
SBDSP1-202ENST00000423945 NXPH4O95158 308 aa12.2□□□□□ -0.46
SBDSP1-202ENST00000423945 LGALSLQ3ZCW2 172 aaPredicted RBP12.2□□□□□ -0.46
SBDSP1-202ENST00000423945 ZNF876PQ49A33 203 aa12.2□□□□□ -0.46
SBDSP1-202ENST00000423945 ZNF506Q5JVG8 444 aa12.2□□□□□ -0.46
SBDSP1-202ENST00000423945 CFAP126Q5VTH2 177 aa12.2□□□□□ -0.46
SBDSP1-202ENST00000423945 CST9LP1Q5W188 147 aa12.2□□□□□ -0.46
SBDSP1-202ENST00000423945 Q6ZNX1 250 aa12.2□□□□□ -0.46
SBDSP1-202ENST00000423945 PTH2Q96A98 100 aa12.2□□□□□ -0.46
SBDSP1-202ENST00000423945 FMC1Q96HJ9 113 aa12.2□□□□□ -0.46
SBDSP1-202ENST00000423945 A0A1W2PPQ1 181 aa12.19□□□□□ -0.46
SBDSP1-202ENST00000423945 TTC32Q5I0X7 151 aa12.19□□□□□ -0.46
SBDSP1-202ENST00000423945 NEGR1Q7Z3B1 354 aa12.19□□□□□ -0.46
SBDSP1-202ENST00000423945 TCTE3Q8IZS6 198 aa12.19□□□□□ -0.46
SBDSP1-202ENST00000423945 SIVA1O15304 175 aa12.18□□□□□ -0.46
SBDSP1-202ENST00000423945 PFDN1O60925 122 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms