RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 OR4B1Q8NGF8 309 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 OR2G3Q8NGZ4 309 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 PAXXQ9BUH6 204 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 OCR1Q9BZK8 76 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 MFFQ9GZY8 342 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 ZNF586Q9NXT0 402 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 AHNAK2Q8IVF2 5795 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 A0A0D9SG52 128 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 ZNF705EA8MWA4 302 aaPredicted RBP1.76□□□□□ -2.13
VPS13A-208ENST00000423463 H3BTX0 84 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 ARPC5O15511 151 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 OR7C2O60412 319 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 PYYP10082 97 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 ATP6V0CP27449 155 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 HLA-DMBP28068 263 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 TSPOP30536 169 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 DEFB1P60022 68 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 EIF5AP63241 154 aaKnown RBP1.76□□□□□ -2.13
VPS13A-208ENST00000423463 HIST1H1AQ02539 215 aaPredicted RBP1.76□□□□□ -2.13
VPS13A-208ENST00000423463 ZNF345Q14585 488 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 KHDC3LQ587J8 217 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 MUC21Q5SSG8 566 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 GDF5OSQ5U4N7 250 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 RPL7L1Q6DKI1 246 aaKnown RBP1.76□□□□□ -2.13
VPS13A-208ENST00000423463 AMTNQ6UX39 209 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 KCNRGQ8N5I3 272 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 ARL6IP6Q8N6S5 226 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 OR10G4Q8NGN3 311 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 OR10G9Q8NGN4 311 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 OR10J6PQ8NGY7 276 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 FXYD5Q96DB9 178 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 IGF2BP2-AS1Q96M15 143 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 LINC00477Q96M19 166 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 SLC25A2Q9BXI2 301 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 ACTR3CQ9C0K3 210 aaPredicted RBP1.76□□□□□ -2.13
VPS13A-208ENST00000423463 C11orf68Q9H3H3 251 aaKnown RBP1.76□□□□□ -2.13
VPS13A-208ENST00000423463 XCL2Q9UBD3 114 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 GOLT1BQ9Y3E0 138 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 SSPOA2VEC9 5147 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 TMEM189A5PLL7 270 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 ZNF705FA8MVS1 300 aaPredicted RBP1.76□□□□□ -2.13
VPS13A-208ENST00000423463 BOLA2-SMG1P6H3BVE0 249 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 SLC17A3O00476 420 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 SNRPCP09234 159 aaKnown RBP1.76□□□□□ -2.13
VPS13A-208ENST00000423463 ZNF705DP0CH99 300 aaPredicted RBP1.76□□□□□ -2.13
VPS13A-208ENST00000423463 ZNF705BP0CI00 300 aaPredicted RBP1.76□□□□□ -2.13
VPS13A-208ENST00000423463 STAG3L2P0CL84 134 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 STAG3L3P0CL85 134 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 CSN1S1P47710 185 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 CDC34P49427 236 aaPredicted RBP1.76□□□□□ -2.13
VPS13A-208ENST00000423463 NDUFV3P56181 108 aaKnown RBP1.76□□□□□ -2.13
VPS13A-208ENST00000423463 FXYD7P58549 80 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 RAB2AP61019 212 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 KRTAP5-7Q6L8G8 165 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 ZNF705AQ6ZN79 300 aaPredicted RBP1.76□□□□□ -2.13
VPS13A-208ENST00000423463 TCTE3Q8IZS6 198 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 LINC00518Q8N0U6 118 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 C1orf158Q8N1D5 194 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 RPP25LQ8N5L8 163 aaKnown RBP1.76□□□□□ -2.13
VPS13A-208ENST00000423463 RXFP4Q8TDU9 374 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 BLNKQ8WV28 456 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 ODF3Q96PU9 254 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 C20orf144Q9BQM9 153 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 SLC35B3Q9H1N7 401 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 Q9HAA7 133 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 CYTL1Q9NRR1 136 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 RFNGQ9Y644 331 aa1.76□□□□□ -2.13
VPS13A-208ENST00000423463 TRBV7-9A0A0J9YWB2 115 aa1.75□□□□□ -2.13
VPS13A-208ENST00000423463 A0A1B0GVG6 124 aa1.75□□□□□ -2.13
VPS13A-208ENST00000423463 KANTRA0A1W2PQU2 76 aa1.75□□□□□ -2.13
VPS13A-208ENST00000423463 RBAKDNA6NC62 111 aa1.75□□□□□ -2.13
VPS13A-208ENST00000423463 SMLR1H3BR10 107 aa1.75□□□□□ -2.13
VPS13A-208ENST00000423463 CRXO43186 299 aaPredicted RBP1.75□□□□□ -2.13
VPS13A-208ENST00000423463 CXorf1O96002 111 aa1.75□□□□□ -2.13
VPS13A-208ENST00000423463 INSP01308 110 aa1.75□□□□□ -2.13
VPS13A-208ENST00000423463 HBE1P02100 147 aa1.75□□□□□ -2.13
VPS13A-208ENST00000423463 SLC25A5P05141 298 aaKnown RBP1.75□□□□□ -2.13
VPS13A-208ENST00000423463 NMBP08949 121 aa1.75□□□□□ -2.13
VPS13A-208ENST00000423463 OR10J4P0C629 311 aa1.75□□□□□ -2.13
VPS13A-208ENST00000423463 SEC11BP0C7V7 166 aa1.75□□□□□ -2.13
VPS13A-208ENST00000423463 RBMY1A1P0DJD3 496 aaKnown RBP1.75□□□□□ -2.13
VPS13A-208ENST00000423463 RBMY1CP0DJD4 496 aa1.75□□□□□ -2.13
VPS13A-208ENST00000423463 LEPP41159 167 aa1.75□□□□□ -2.13
VPS13A-208ENST00000423463 CDKN1BP46527 198 aa1.75□□□□□ -2.13
VPS13A-208ENST00000423463 RANP62826 216 aaKnown RBP1.75□□□□□ -2.13
VPS13A-208ENST00000423463 UBE2L3P68036 154 aaKnown RBP1.75□□□□□ -2.13
VPS13A-208ENST00000423463 RBMY1FQ15415 496 aaKnown RBP1.75□□□□□ -2.13
VPS13A-208ENST00000423463 RRN3P1Q2M238 152 aa1.75□□□□□ -2.13
VPS13A-208ENST00000423463 FAM74A1Q5RGS3 127 aa1.75□□□□□ -2.13
VPS13A-208ENST00000423463 AKR1C8PQ5T2L2 129 aa1.75□□□□□ -2.13
VPS13A-208ENST00000423463 CASC10Q5T4H9 136 aa1.75□□□□□ -2.13
VPS13A-208ENST00000423463 TMUB2Q71RG4 321 aa1.75□□□□□ -2.13
VPS13A-208ENST00000423463 TMEM256Q8N2U0 113 aa1.75□□□□□ -2.13
VPS13A-208ENST00000423463 EXOC3-AS1Q8N2X6 119 aa1.75□□□□□ -2.13
VPS13A-208ENST00000423463 Q8NAQ8 132 aa1.75□□□□□ -2.13
VPS13A-208ENST00000423463 SUN5Q8TC36 379 aa1.75□□□□□ -2.13
VPS13A-208ENST00000423463 RASL10AQ92737 203 aa1.75□□□□□ -2.13
VPS13A-208ENST00000423463 HYLS1Q96M11 299 aa1.75□□□□□ -2.13
VPS13A-208ENST00000423463 CHCHD5Q9BSY4 110 aa1.75□□□□□ -2.13
VPS13A-208ENST00000423463 TMEM208Q9BTX3 173 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms