RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 ZNF479Q96JC4 524 aa10.65□□□□□ -0.7
SPC24-201ENST00000423327 TMEM167BQ9NRX6 74 aa10.65□□□□□ -0.7
SPC24-201ENST00000423327 EPDR1Q9UM22 224 aa10.65□□□□□ -0.7
SPC24-201ENST00000423327 CTXND1A0A1B0GTU2 59 aa10.64□□□□□ -0.71
SPC24-201ENST00000423327 SERTM2A0A1B0GWG4 89 aa10.64□□□□□ -0.71
SPC24-201ENST00000423327 PAX4O43316 350 aa10.64□□□□□ -0.71
SPC24-201ENST00000423327 C6orf223Q8N319 242 aa10.64□□□□□ -0.71
SPC24-201ENST00000423327 SPXQ9BT56 116 aa10.64□□□□□ -0.71
SPC24-201ENST00000423327 PRO0255Q9UI72 69 aa10.64□□□□□ -0.71
SPC24-201ENST00000423327 PSG8Q9UQ74 426 aa10.64□□□□□ -0.71
SPC24-201ENST00000423327 DNAH5Q8TE73 4624 aa10.64□□□□□ -0.71
SPC24-201ENST00000423327 FGF8P55075 233 aaPredicted RBP10.63□□□□□ -0.71
SPC24-201ENST00000423327 SOHLH1Q5JUK2 328 aa10.63□□□□□ -0.71
SPC24-201ENST00000423327 CYB561D1Q8N8Q1 229 aa10.63□□□□□ -0.71
SPC24-201ENST00000423327 TMEM75Q8N9X5 138 aa10.63□□□□□ -0.71
SPC24-201ENST00000423327 OR11H4Q8NGC9 324 aa10.63□□□□□ -0.71
SPC24-201ENST00000423327 LINC00479Q96M42 142 aa10.63□□□□□ -0.71
SPC24-201ENST00000423327 A0A1W2PRE2 83 aa10.62□□□□□ -0.71
SPC24-201ENST00000423327 FLI1Q01543 452 aaPredicted RBP10.62□□□□□ -0.71
SPC24-201ENST00000423327 IQCF2Q8IXL9 164 aa10.62□□□□□ -0.71
SPC24-201ENST00000423327 ICOSQ9Y6W8 199 aa10.62□□□□□ -0.71
SPC24-201ENST00000423327 TRAV34A0A0B4J273 112 aa10.61□□□□□ -0.71
SPC24-201ENST00000423327 TAAR5O14804 337 aa10.61□□□□□ -0.71
SPC24-201ENST00000423327 GCGP01275 180 aa10.61□□□□□ -0.71
SPC24-201ENST00000423327 UBE2G2P60604 165 aa10.61□□□□□ -0.71
SPC24-201ENST00000423327 PRNTQ86SH4 94 aa10.61□□□□□ -0.71
SPC24-201ENST00000423327 ZNF575Q86XF7 245 aa10.61□□□□□ -0.71
SPC24-201ENST00000423327 NDFIP1Q9BT67 221 aa10.61□□□□□ -0.71
SPC24-201ENST00000423327 SDF2L1Q9HCN8 221 aa10.61□□□□□ -0.71
SPC24-201ENST00000423327 HHLA3Q9XRX5 114 aa10.61□□□□□ -0.71
SPC24-201ENST00000423327 PCLOQ9Y6V0 5065 aa10.6□□□□□ -0.71
SPC24-201ENST00000423327 TRAV4A0A0B4J268 109 aa10.6□□□□□ -0.71
SPC24-201ENST00000423327 FAM74A7A6NL05 159 aa10.6□□□□□ -0.71
SPC24-201ENST00000423327 M0R2P5 195 aa10.6□□□□□ -0.71
SPC24-201ENST00000423327 PFN1P07737 140 aaKnown RBP10.6□□□□□ -0.71
SPC24-201ENST00000423327 FHITP49789 147 aa10.6□□□□□ -0.71
SPC24-201ENST00000423327 AKR1C8PQ5T2L2 129 aa10.6□□□□□ -0.71
SPC24-201ENST00000423327 DPPA3Q6W0C5 159 aa10.6□□□□□ -0.71
SPC24-201ENST00000423327 TRGV4A0A0C4DH28 118 aa10.59□□□□□ -0.71
SPC24-201ENST00000423327 K7EQD1 137 aa10.59□□□□□ -0.71
SPC24-201ENST00000423327 SLAQ13239 276 aa10.59□□□□□ -0.71
SPC24-201ENST00000423327 ZNF345Q14585 488 aa10.59□□□□□ -0.71
SPC24-201ENST00000423327 KCNRGQ8N5I3 272 aa10.59□□□□□ -0.71
SPC24-201ENST00000423327 KCNS1Q96KK3 526 aa10.59□□□□□ -0.71
SPC24-201ENST00000423327 C9orf85Q96MD7 179 aa10.59□□□□□ -0.71
SPC24-201ENST00000423327 ARL2-SNX15V9GYD0 113 aa10.59□□□□□ -0.71
SPC24-201ENST00000423327 HSPG2P98160 4391 aa10.59□□□□□ -0.71
SPC24-201ENST00000423327 LOC100131303A0A0U1RQF7 123 aa10.58□□□□□ -0.72
SPC24-201ENST00000423327 A0A1W2PPQ1 181 aa10.58□□□□□ -0.72
SPC24-201ENST00000423327 MAP1LC3B2A6NCE7 125 aa10.58□□□□□ -0.72
SPC24-201ENST00000423327 K7EQM0 130 aa10.58□□□□□ -0.72
SPC24-201ENST00000423327 PEX7O00628 323 aa10.58□□□□□ -0.72
SPC24-201ENST00000423327 NXPH4O95158 308 aa10.58□□□□□ -0.72
SPC24-201ENST00000423327 RNASE3P12724 160 aaKnown RBP10.58□□□□□ -0.72
SPC24-201ENST00000423327 SMUG1Q53HV7 270 aa10.58□□□□□ -0.72
SPC24-201ENST00000423327 TTC32Q5I0X7 151 aa10.58□□□□□ -0.72
SPC24-201ENST00000423327 LYPD5Q6UWN5 251 aa10.58□□□□□ -0.72
SPC24-201ENST00000423327 Q86TA4 180 aa10.58□□□□□ -0.72
SPC24-201ENST00000423327 MAP1LC3BQ9GZQ8 125 aa10.58□□□□□ -0.72
SPC24-201ENST00000423327 IGKV3D-20A0A0C4DH25 116 aa10.57□□□□□ -0.72
SPC24-201ENST00000423327 MRPL23Q16540 153 aaKnown RBP10.57□□□□□ -0.72
SPC24-201ENST00000423327 OR4C5Q8NGB2 326 aa10.57□□□□□ -0.72
SPC24-201ENST00000423327 APOBP04114 4563 aaKnown RBP10.57□□□□□ -0.72
SPC24-201ENST00000423327 GYPEP15421 78 aa10.56□□□□□ -0.72
SPC24-201ENST00000423327 GATA1P15976 413 aaPredicted RBP10.56□□□□□ -0.72
SPC24-201ENST00000423327 Q6ZRN7 208 aaPredicted RBP10.56□□□□□ -0.72
SPC24-201ENST00000423327 NEGR1Q7Z3B1 354 aa10.56□□□□□ -0.72
SPC24-201ENST00000423327 PGPEP1LA6NFU8 196 aa10.55□□□□□ -0.72
SPC24-201ENST00000423327 FBLL1A6NHQ2 334 aaKnown RBP10.55□□□□□ -0.72
SPC24-201ENST00000423327 HMSDA8MTL9 139 aa10.55□□□□□ -0.72
SPC24-201ENST00000423327 C9JCJ5 164 aa10.55□□□□□ -0.72
SPC24-201ENST00000423327 SIVA1O15304 175 aa10.55□□□□□ -0.72
SPC24-201ENST00000423327 IFNA7P01567 189 aa10.55□□□□□ -0.72
SPC24-201ENST00000423327 MED14OSP0DP75 135 aa10.55□□□□□ -0.72
SPC24-201ENST00000423327 LINC00315P59091 139 aa10.55□□□□□ -0.72
SPC24-201ENST00000423327 ZFP69Q49AA0 526 aa10.55□□□□□ -0.72
SPC24-201ENST00000423327 ZNF506Q5JVG8 444 aa10.55□□□□□ -0.72
SPC24-201ENST00000423327 SAPCD1Q5SSQ6 148 aa10.55□□□□□ -0.72
SPC24-201ENST00000423327 KRTAP17-1Q9BYP8 105 aa10.55□□□□□ -0.72
SPC24-201ENST00000423327 RS1O15537 224 aa10.54□□□□□ -0.72
SPC24-201ENST00000423327 BCL2L11O43521 198 aa10.54□□□□□ -0.72
SPC24-201ENST00000423327 SRIP30626 198 aa10.54□□□□□ -0.72
SPC24-201ENST00000423327 CRIP1P50238 77 aa10.54□□□□□ -0.72
SPC24-201ENST00000423327 ZNF876PQ49A33 203 aa10.54□□□□□ -0.72
SPC24-201ENST00000423327 CFAP126Q5VTH2 177 aa10.54□□□□□ -0.72
SPC24-201ENST00000423327 WFDC10BQ8IUB3 73 aa10.54□□□□□ -0.72
SPC24-201ENST00000423327 HIST1H2BAQ96A08 127 aa10.54□□□□□ -0.72
SPC24-201ENST00000423327 ZC2HC1AQ96GY0 325 aa10.54□□□□□ -0.72
SPC24-201ENST00000423327 ABCA13Q86UQ4 5058 aa10.54□□□□□ -0.72
SPC24-201ENST00000423327 ORM1P02763 201 aa10.53□□□□□ -0.72
SPC24-201ENST00000423327 SEC11BP0C7V7 166 aa10.53□□□□□ -0.72
SPC24-201ENST00000423327 COX8CQ7Z4L0 72 aa10.53□□□□□ -0.72
SPC24-201ENST00000423327 TNFRSF18Q9Y5U5 241 aa10.53□□□□□ -0.72
SPC24-201ENST00000423327 IGHV3-73A0A0B4J1V6 119 aa10.52□□□□□ -0.73
SPC24-201ENST00000423327 SLC25A29Q8N8R3 303 aa10.52□□□□□ -0.73
SPC24-201ENST00000423327 PCNPQ8WW12 178 aaKnown RBP10.52□□□□□ -0.73
SPC24-201ENST00000423327 MBD3L1Q8WWY6 194 aa10.52□□□□□ -0.73
SPC24-201ENST00000423327 PTH2Q96A98 100 aa10.52□□□□□ -0.73
SPC24-201ENST00000423327 ZNF471Q9BX82 626 aaPredicted RBP10.52□□□□□ -0.73
SPC24-201ENST00000423327 NKX6-2Q9C056 277 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms