RNA–Protein interactions for RNA: ENST00000423251.1

MCF2L-214, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-214ENST00000423251 TRAV10A0A0B4J240 114 aa13.32□□□□□ -0.28
MCF2L-214ENST00000423251 DAD1P61803 113 aa13.32□□□□□ -0.28
MCF2L-214ENST00000423251 KCNS1Q96KK3 526 aa13.32□□□□□ -0.28
MCF2L-214ENST00000423251 GSN-AS1Q9NRJ2 163 aa13.32□□□□□ -0.28
MCF2L-214ENST00000423251 FABP5P3A8MUU1 101 aa13.31□□□□□ -0.28
MCF2L-214ENST00000423251 TCL1AP56279 114 aa13.31□□□□□ -0.28
MCF2L-214ENST00000423251 TMEM183AQ8IXX5 376 aa13.31□□□□□ -0.28
MCF2L-214ENST00000423251 NAGKQ9UJ70 344 aa13.31□□□□□ -0.28
MCF2L-214ENST00000423251 TRGV11A0A075B6L2 103 aa13.3□□□□□ -0.28
MCF2L-214ENST00000423251 DEFB131BA0A096LNP1 70 aa13.3□□□□□ -0.28
MCF2L-214ENST00000423251 DEFB130BP0DP73 79 aa13.3□□□□□ -0.28
MCF2L-214ENST00000423251 DEFB130AP0DP74 79 aa13.3□□□□□ -0.28
MCF2L-214ENST00000423251 LINC00612Q8N6U2 182 aa13.3□□□□□ -0.28
MCF2L-214ENST00000423251 RBFOX3A6NFN3 312 aa13.29□□□□□ -0.28
MCF2L-214ENST00000423251 RPL35P42766 123 aaKnown RBP13.29□□□□□ -0.28
MCF2L-214ENST00000423251 ZNF415Q09FC8 603 aa13.29□□□□□ -0.28
MCF2L-214ENST00000423251 BAGE2Q86Y30 109 aa13.29□□□□□ -0.28
MCF2L-214ENST00000423251 ZC2HC1AQ96GY0 325 aa13.29□□□□□ -0.28
MCF2L-214ENST00000423251 SDF2L1Q9HCN8 221 aa13.29□□□□□ -0.28
MCF2L-214ENST00000423251 GNRH2O43555 120 aa13.28□□□□□ -0.28
MCF2L-214ENST00000423251 CRIP1P50238 77 aa13.28□□□□□ -0.28
MCF2L-214ENST00000423251 LGALS9BQ3B8N2 356 aa13.28□□□□□ -0.28
MCF2L-214ENST00000423251 LINC00476Q8WZB0 136 aa13.28□□□□□ -0.28
MCF2L-214ENST00000423251 MLST8Q9BVC4 326 aa13.28□□□□□ -0.28
MCF2L-214ENST00000423251 MED9Q9NWA0 146 aa13.28□□□□□ -0.28
MCF2L-214ENST00000423251 MDFICQ9P1T7 246 aa13.28□□□□□ -0.28
MCF2L-214ENST00000423251 C11orf21Q9P2W6 132 aa13.28□□□□□ -0.28
MCF2L-214ENST00000423251 SPINK4O60575 86 aa13.27□□□□□ -0.29
MCF2L-214ENST00000423251 ZNF674Q2M3X9 581 aa13.27□□□□□ -0.29
MCF2L-214ENST00000423251 ZNF506Q5JVG8 444 aa13.27□□□□□ -0.29
MCF2L-214ENST00000423251 FAM162BQ5T6X4 162 aa13.27□□□□□ -0.29
MCF2L-214ENST00000423251 SPXQ9BT56 116 aa13.27□□□□□ -0.29
MCF2L-214ENST00000423251 IGHV3-16A0A0C4DH30 117 aa13.26□□□□□ -0.29
MCF2L-214ENST00000423251 TYMSP04818 313 aa13.26□□□□□ -0.29
MCF2L-214ENST00000423251 DERL1Q9BUN8 251 aa13.26□□□□□ -0.29
MCF2L-214ENST00000423251 GAGE12BA1L429 117 aa13.25□□□□□ -0.29
MCF2L-214ENST00000423251 NDUFS6O75380 124 aaKnown RBP13.25□□□□□ -0.29
MCF2L-214ENST00000423251 GAGE7O76087 117 aa13.25□□□□□ -0.29
MCF2L-214ENST00000423251 GAGE12FP0CL80 117 aa13.25□□□□□ -0.29
MCF2L-214ENST00000423251 GAGE12GP0CL81 117 aa13.25□□□□□ -0.29
MCF2L-214ENST00000423251 GAGE12IP0CL82 117 aa13.25□□□□□ -0.29
MCF2L-214ENST00000423251 TCTAP57738 103 aa13.25□□□□□ -0.29
MCF2L-214ENST00000423251 Q6ZTI0 123 aa13.25□□□□□ -0.29
MCF2L-214ENST00000423251 C18orf15Q96N68 181 aa13.25□□□□□ -0.29
MCF2L-214ENST00000423251 TRGV1A0A0A0MS02 117 aa13.24□□□□□ -0.29
MCF2L-214ENST00000423251 IGKV3D-20A0A0C4DH25 116 aa13.24□□□□□ -0.29
MCF2L-214ENST00000423251 IGLL5B9A064 214 aa13.24□□□□□ -0.29
MCF2L-214ENST00000423251 TMEM250H0YL14 139 aa13.24□□□□□ -0.29
MCF2L-214ENST00000423251 SH2D1AO60880 128 aa13.24□□□□□ -0.29
MCF2L-214ENST00000423251 LY6G6CO95867 125 aa13.24□□□□□ -0.29
MCF2L-214ENST00000423251 ATP5G1P05496 136 aa13.24□□□□□ -0.29
MCF2L-214ENST00000423251 NHLRC2Q8NBF2 726 aa13.24□□□□□ -0.29
MCF2L-214ENST00000423251 SMIM12Q96EX1 92 aa13.24□□□□□ -0.29
MCF2L-214ENST00000423251 FAM210BQ96KR6 192 aa13.24□□□□□ -0.29
MCF2L-214ENST00000423251 FAM210AQ96ND0 272 aa13.24□□□□□ -0.29
MCF2L-214ENST00000423251 RAB19A4D1S5 217 aa13.23□□□□□ -0.29
MCF2L-214ENST00000423251 ORM1P02763 201 aa13.23□□□□□ -0.29
MCF2L-214ENST00000423251 HTN3P15516 51 aa13.23□□□□□ -0.29
MCF2L-214ENST00000423251 CENPWQ5EE01 88 aa13.23□□□□□ -0.29
MCF2L-214ENST00000423251 RASL10AQ92737 203 aa13.23□□□□□ -0.29
MCF2L-214ENST00000423251 EIF5A2Q9GZV4 153 aaKnown RBP13.23□□□□□ -0.29
MCF2L-214ENST00000423251 TRGV2A0A075B6R0 118 aa13.22□□□□□ -0.29
MCF2L-214ENST00000423251 KRBOX1C9JBD0 128 aa13.22□□□□□ -0.29
MCF2L-214ENST00000423251 GNG4P50150 75 aa13.22□□□□□ -0.29
MCF2L-214ENST00000423251 TOR2AQ5JU69 321 aa13.22□□□□□ -0.29
MCF2L-214ENST00000423251 FRAS1Q86XX4 4008 aa13.22□□□□□ -0.29
MCF2L-214ENST00000423251 B4DEV8 164 aa13.21□□□□□ -0.29
MCF2L-214ENST00000423251 M0R2P5 195 aa13.21□□□□□ -0.29
MCF2L-214ENST00000423251 IGLV2-8P01709 118 aa13.21□□□□□ -0.29
MCF2L-214ENST00000423251 LINC01559Q495D7 138 aa13.21□□□□□ -0.29
MCF2L-214ENST00000423251 PCNPQ8WW12 178 aaKnown RBP13.21□□□□□ -0.29
MCF2L-214ENST00000423251 MRPL16Q9NX20 251 aaKnown RBP13.21□□□□□ -0.29
MCF2L-214ENST00000423251 IGHV4-4A0A075B6R2 117 aa13.2□□□□□ -0.3
MCF2L-214ENST00000423251 F5H768 121 aa13.2□□□□□ -0.3
MCF2L-214ENST00000423251 RAB14P61106 215 aa13.2□□□□□ -0.3
MCF2L-214ENST00000423251 DNLZQ5SXM8 178 aa13.2□□□□□ -0.3
MCF2L-214ENST00000423251 C9orf85Q96MD7 179 aa13.2□□□□□ -0.3
MCF2L-214ENST00000423251 APLNQ9ULZ1 77 aa13.2□□□□□ -0.3
MCF2L-214ENST00000423251 TRBV20OR9-2A0A075B6H5 130 aa13.19□□□□□ -0.3
MCF2L-214ENST00000423251 M0R036 132 aa13.19□□□□□ -0.3
MCF2L-214ENST00000423251 RNASE3P12724 160 aaKnown RBP13.19□□□□□ -0.3
MCF2L-214ENST00000423251 PTH2Q96A98 100 aa13.19□□□□□ -0.3
MCF2L-214ENST00000423251 NDUFAF3Q9BU61 184 aa13.19□□□□□ -0.3
MCF2L-214ENST00000423251 BIN3Q9NQY0 253 aa13.19□□□□□ -0.3
MCF2L-214ENST00000423251 KMT2AQ03164 3969 aa13.19□□□□□ -0.3
MCF2L-214ENST00000423251 C9JCJ5 164 aa13.18□□□□□ -0.3
MCF2L-214ENST00000423251 S100A4P26447 101 aaKnown RBP13.18□□□□□ -0.3
MCF2L-214ENST00000423251 ASIPP42127 132 aa13.18□□□□□ -0.3
MCF2L-214ENST00000423251 ZNF575Q86XF7 245 aa13.18□□□□□ -0.3
MCF2L-214ENST00000423251 PARLQ9H300 379 aa13.18□□□□□ -0.3
MCF2L-214ENST00000423251 IL36BQ9NZH7 164 aa13.18□□□□□ -0.3
MCF2L-214ENST00000423251 MGST1P10620 155 aaKnown RBP13.17□□□□□ -0.3
MCF2L-214ENST00000423251 PRR27Q6MZM9 219 aa13.17□□□□□ -0.3
MCF2L-214ENST00000423251 SRP19P09132 144 aaKnown RBP13.16□□□□□ -0.3
MCF2L-214ENST00000423251 CXCL1P09341 107 aa13.16□□□□□ -0.3
MCF2L-214ENST00000423251 IFITM2Q01629 132 aa13.16□□□□□ -0.3
MCF2L-214ENST00000423251 OR5I1Q13606 314 aa13.16□□□□□ -0.3
MCF2L-214ENST00000423251 TMEM88Q6PEY1 159 aa13.16□□□□□ -0.3
MCF2L-214ENST00000423251 DAZAP1Q96EP5 407 aaKnown RBP13.16□□□□□ -0.3
MCF2L-214ENST00000423251 SMDT1Q9H4I9 107 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms