RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 CYCSP99999 105 aaKnown RBP12.49□□□□□ -0.41
AC004540.1-203ENST00000421862 NAGKQ9UJ70 344 aa12.49□□□□□ -0.41
AC004540.1-203ENST00000421862 HSPB11Q9Y547 144 aa12.49□□□□□ -0.41
AC004540.1-203ENST00000421862 TRAV21A0A0B4J279 112 aa12.48□□□□□ -0.41
AC004540.1-203ENST00000421862 PPP1R1CQ8WVI7 109 aa12.48□□□□□ -0.41
AC004540.1-203ENST00000421862 TVP23CQ96ET8 276 aa12.48□□□□□ -0.41
AC004540.1-203ENST00000421862 GNRH2O43555 120 aa12.47□□□□□ -0.41
AC004540.1-203ENST00000421862 SMR3BP02814 79 aaPredicted RBP12.47□□□□□ -0.41
AC004540.1-203ENST00000421862 ENKURQ8TC29 256 aa12.47□□□□□ -0.41
AC004540.1-203ENST00000421862 IGLV5-52A0A0A0MRZ9 124 aa12.46□□□□□ -0.41
AC004540.1-203ENST00000421862 IBA57-AS1B1ANH7 110 aa12.46□□□□□ -0.41
AC004540.1-203ENST00000421862 F6UZH7 168 aa12.46□□□□□ -0.41
AC004540.1-203ENST00000421862 PQLC2Q6ZP29 291 aa12.46□□□□□ -0.41
AC004540.1-203ENST00000421862 GOLT1AQ6ZVE7 132 aa12.46□□□□□ -0.41
AC004540.1-203ENST00000421862 CMTM2Q8TAZ6 248 aa12.46□□□□□ -0.41
AC004540.1-203ENST00000421862 HYLS1Q96M11 299 aa12.46□□□□□ -0.41
AC004540.1-203ENST00000421862 SDF2L1Q9HCN8 221 aa12.46□□□□□ -0.41
AC004540.1-203ENST00000421862 BOLA1Q9Y3E2 137 aa12.46□□□□□ -0.41
AC004540.1-203ENST00000421862 TRAV8-1A0A0A6YYK1 113 aa12.45□□□□□ -0.42
AC004540.1-203ENST00000421862 PGPA6NDG6 321 aa12.45□□□□□ -0.42
AC004540.1-203ENST00000421862 EIF3GO75821 320 aaKnown RBP eCLIP12.45□□□□□ -0.42
AC004540.1-203ENST00000421862 PPT1P50897 306 aa12.45□□□□□ -0.42
AC004540.1-203ENST00000421862 HAMPP81172 84 aa12.45□□□□□ -0.42
AC004540.1-203ENST00000421862 FAM74A1Q5RGS3 127 aa12.45□□□□□ -0.42
AC004540.1-203ENST00000421862 Q6ZSN1 163 aa12.45□□□□□ -0.42
AC004540.1-203ENST00000421862 Q8N814 137 aa12.45□□□□□ -0.42
AC004540.1-203ENST00000421862 NHLRC2Q8NBF2 726 aa12.45□□□□□ -0.42
AC004540.1-203ENST00000421862 S100ZQ8WXG8 99 aa12.45□□□□□ -0.42
AC004540.1-203ENST00000421862 KCNS1Q96KK3 526 aa12.45□□□□□ -0.42
AC004540.1-203ENST00000421862 MBD2Q9UBB5 411 aa12.45□□□□□ -0.42
AC004540.1-203ENST00000421862 RPH3ALQ9UNE2 315 aa12.45□□□□□ -0.42
AC004540.1-203ENST00000421862 FBLL1A6NHQ2 334 aaKnown RBP12.44□□□□□ -0.42
AC004540.1-203ENST00000421862 PSCAO43653 123 aa12.44□□□□□ -0.42
AC004540.1-203ENST00000421862 MPC2O95563 127 aa12.44□□□□□ -0.42
AC004540.1-203ENST00000421862 PET100P0DJ07 73 aa12.44□□□□□ -0.42
AC004540.1-203ENST00000421862 SLC25A29Q8N8R3 303 aa12.44□□□□□ -0.42
AC004540.1-203ENST00000421862 TREM1Q9NP99 234 aa12.44□□□□□ -0.42
AC004540.1-203ENST00000421862 FAM229AH3BQW9 127 aa12.43□□□□□ -0.42
AC004540.1-203ENST00000421862 CIDEAO60543 219 aa12.43□□□□□ -0.42
AC004540.1-203ENST00000421862 UPK1BO75841 260 aa12.43□□□□□ -0.42
AC004540.1-203ENST00000421862 RHOHQ15669 191 aa12.43□□□□□ -0.42
AC004540.1-203ENST00000421862 ASB13Q8WXK3 278 aa12.43□□□□□ -0.42
AC004540.1-203ENST00000421862 TRBV6-4A0A1B0GX49 114 aa12.42□□□□□ -0.42
AC004540.1-203ENST00000421862 RS1O15537 224 aa12.42□□□□□ -0.42
AC004540.1-203ENST00000421862 PFN1P07737 140 aaKnown RBP12.42□□□□□ -0.42
AC004540.1-203ENST00000421862 RPL12P30050 165 aaKnown RBP12.42□□□□□ -0.42
AC004540.1-203ENST00000421862 GNG5P63218 68 aa12.42□□□□□ -0.42
AC004540.1-203ENST00000421862 LAGE3Q14657 143 aa12.42□□□□□ -0.42
AC004540.1-203ENST00000421862 CFAP126Q5VTH2 177 aa12.42□□□□□ -0.42
AC004540.1-203ENST00000421862 DPPA3Q6W0C5 159 aa12.42□□□□□ -0.42
AC004540.1-203ENST00000421862 SCGB1C1Q8TD33 95 aa12.42□□□□□ -0.42
AC004540.1-203ENST00000421862 C9orf85Q96MD7 179 aa12.42□□□□□ -0.42
AC004540.1-203ENST00000421862 SMIM3Q9BZL3 60 aa12.42□□□□□ -0.42
AC004540.1-203ENST00000421862 TRAV8-6A0A0B4J262 113 aa12.41□□□□□ -0.42
AC004540.1-203ENST00000421862 INMT-MINDY4F8WBC2 141 aa12.41□□□□□ -0.42
AC004540.1-203ENST00000421862 C1QBP02746 253 aa12.41□□□□□ -0.42
AC004540.1-203ENST00000421862 IFITM3Q01628 133 aa12.41□□□□□ -0.42
AC004540.1-203ENST00000421862 ACOT6Q3I5F7 207 aaPredicted RBP12.41□□□□□ -0.42
AC004540.1-203ENST00000421862 LELP1Q5T871 98 aa12.41□□□□□ -0.42
AC004540.1-203ENST00000421862 MARVELD1Q9BSK0 173 aa12.41□□□□□ -0.42
AC004540.1-203ENST00000421862 WFDC1Q9HC57 220 aa12.41□□□□□ -0.42
AC004540.1-203ENST00000421862 C11orf21Q9P2W6 132 aa12.41□□□□□ -0.42
AC004540.1-203ENST00000421862 SERTM2A0A1B0GWG4 89 aa12.4□□□□□ -0.42
AC004540.1-203ENST00000421862 RAB2AP61019 212 aa12.4□□□□□ -0.42
AC004540.1-203ENST00000421862 ZNF876PQ49A33 203 aa12.4□□□□□ -0.42
AC004540.1-203ENST00000421862 OR10J3Q5JRS4 329 aa12.4□□□□□ -0.42
AC004540.1-203ENST00000421862 PTH2Q96A98 100 aa12.4□□□□□ -0.42
AC004540.1-203ENST00000421862 PRADC1Q9BSG0 188 aa12.4□□□□□ -0.42
AC004540.1-203ENST00000421862 Q9HAA7 133 aa12.4□□□□□ -0.42
AC004540.1-203ENST00000421862 ZNF80P51504 273 aaPredicted RBP12.39□□□□□ -0.43
AC004540.1-203ENST00000421862 Q6ZSA8 131 aa12.39□□□□□ -0.43
AC004540.1-203ENST00000421862 FAM30AQ9NZY2 134 aa12.39□□□□□ -0.43
AC004540.1-203ENST00000421862 A0A1W2PPV4 95 aa12.38□□□□□ -0.43
AC004540.1-203ENST00000421862 LINC00694P0DN24 101 aa12.38□□□□□ -0.43
AC004540.1-203ENST00000421862 C5orf17Q8NAS9 161 aa12.38□□□□□ -0.43
AC004540.1-203ENST00000421862 SUN5Q8TC36 379 aa12.38□□□□□ -0.43
AC004540.1-203ENST00000421862 NDFIP1Q9BT67 221 aa12.38□□□□□ -0.43
AC004540.1-203ENST00000421862 GTSF1LQ9H1H1 148 aa12.38□□□□□ -0.43
AC004540.1-203ENST00000421862 IGHV3-30P01768 117 aa12.37□□□□□ -0.43
AC004540.1-203ENST00000421862 IGHV3-33P01772 117 aa12.37□□□□□ -0.43
AC004540.1-203ENST00000421862 TCRAP04437 139 aa12.37□□□□□ -0.43
AC004540.1-203ENST00000421862 STAG3L2P0CL84 134 aa12.37□□□□□ -0.43
AC004540.1-203ENST00000421862 STAG3L3P0CL85 134 aa12.37□□□□□ -0.43
AC004540.1-203ENST00000421862 ARL14EPLP0DKL9 152 aa12.37□□□□□ -0.43
AC004540.1-203ENST00000421862 IGHV3-30-3P0DP02 117 aa12.37□□□□□ -0.43
AC004540.1-203ENST00000421862 IGHV3-30-5P0DP03 117 aa12.37□□□□□ -0.43
AC004540.1-203ENST00000421862 MGST1P10620 155 aaKnown RBP12.37□□□□□ -0.43
AC004540.1-203ENST00000421862 WFDC2Q14508 124 aa12.37□□□□□ -0.43
AC004540.1-203ENST00000421862 ZNF506Q5JVG8 444 aa12.37□□□□□ -0.43
AC004540.1-203ENST00000421862 IGLV2-11P01706 119 aa12.36□□□□□ -0.43
AC004540.1-203ENST00000421862 RNASE3P12724 160 aaKnown RBP12.36□□□□□ -0.43
AC004540.1-203ENST00000421862 TMEM75Q8N9X5 138 aa12.36□□□□□ -0.43
AC004540.1-203ENST00000421862 OR10G9Q8NGN4 311 aa12.36□□□□□ -0.43
AC004540.1-203ENST00000421862 OR10G7Q8NGN6 311 aa12.36□□□□□ -0.43
AC004540.1-203ENST00000421862 OR2G3Q8NGZ4 309 aa12.36□□□□□ -0.43
AC004540.1-203ENST00000421862 SGK494Q96LW2 274 aa12.36□□□□□ -0.43
AC004540.1-203ENST00000421862 IGHV3-73A0A0B4J1V6 119 aa12.35□□□□□ -0.43
AC004540.1-203ENST00000421862 PGPEP1LA6NFU8 196 aa12.35□□□□□ -0.43
AC004540.1-203ENST00000421862 TAAR5O14804 337 aa12.35□□□□□ -0.43
AC004540.1-203ENST00000421862 HMGB3O15347 200 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms