RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 NAGKQ9UJ70 344 aa5.42□□□□□ -1.54
VIM-202ENST00000421459 FLG2Q5D862 2391 aaPredicted RBP5.41□□□□□ -1.54
VIM-202ENST00000421459 PKHD1L1Q86WI1 4243 aa5.41□□□□□ -1.54
VIM-202ENST00000421459 J3QL48 77 aa5.41□□□□□ -1.54
VIM-202ENST00000421459 PSCAO43653 123 aa5.41□□□□□ -1.54
VIM-202ENST00000421459 PET100P0DJ07 73 aa5.41□□□□□ -1.54
VIM-202ENST00000421459 PVALBP20472 110 aaPredicted RBP5.41□□□□□ -1.54
VIM-202ENST00000421459 WFDC2Q14508 124 aa5.41□□□□□ -1.54
VIM-202ENST00000421459 ZNF266Q14584 549 aa5.41□□□□□ -1.54
VIM-202ENST00000421459 ZNF345Q14585 488 aa5.41□□□□□ -1.54
VIM-202ENST00000421459 STX12Q86Y82 276 aa5.41□□□□□ -1.54
VIM-202ENST00000421459 IQCF2Q8IXL9 164 aa5.41□□□□□ -1.54
VIM-202ENST00000421459 Q8N3U1 123 aa5.41□□□□□ -1.54
VIM-202ENST00000421459 PCNPQ8WW12 178 aaKnown RBP5.41□□□□□ -1.54
VIM-202ENST00000421459 RASL10AQ92737 203 aa5.41□□□□□ -1.54
VIM-202ENST00000421459 MBD2Q9UBB5 411 aa5.41□□□□□ -1.54
VIM-202ENST00000421459 TNFSF18Q9UNG2 199 aa5.41□□□□□ -1.54
VIM-202ENST00000421459 IGHV3-73A0A0B4J1V6 119 aa5.4□□□□□ -1.54
VIM-202ENST00000421459 RNF222A6NCQ9 220 aa5.4□□□□□ -1.54
VIM-202ENST00000421459 IGHV3-30P01768 117 aa5.4□□□□□ -1.54
VIM-202ENST00000421459 IGHV3-33P01772 117 aa5.4□□□□□ -1.54
VIM-202ENST00000421459 IGHV3-30-3P0DP02 117 aa5.4□□□□□ -1.54
VIM-202ENST00000421459 IGHV3-30-5P0DP03 117 aa5.4□□□□□ -1.54
VIM-202ENST00000421459 NKX2-5P52952 324 aaPredicted RBP5.4□□□□□ -1.54
VIM-202ENST00000421459 HBG1P69891 147 aa5.4□□□□□ -1.54
VIM-202ENST00000421459 HBG2P69892 147 aa5.4□□□□□ -1.54
VIM-202ENST00000421459 ATP6V1FQ16864 119 aa5.4□□□□□ -1.54
VIM-202ENST00000421459 LGALSLQ3ZCW2 172 aaPredicted RBP5.4□□□□□ -1.54
VIM-202ENST00000421459 LRRC37A5PQ49AS3 106 aa5.4□□□□□ -1.54
VIM-202ENST00000421459 Q8N814 137 aa5.4□□□□□ -1.54
VIM-202ENST00000421459 NHLRC2Q8NBF2 726 aa5.4□□□□□ -1.54
VIM-202ENST00000421459 OR4C5Q8NGB2 326 aa5.4□□□□□ -1.54
VIM-202ENST00000421459 OR5C1Q8NGR4 320 aa5.4□□□□□ -1.54
VIM-202ENST00000421459 AQP10Q96PS8 301 aa5.4□□□□□ -1.54
VIM-202ENST00000421459 OR5AC2Q9NZP5 309 aa5.4□□□□□ -1.54
VIM-202ENST00000421459 RPH3ALQ9UNE2 315 aa5.4□□□□□ -1.54
VIM-202ENST00000421459 FXYD6-FXYD2A0A087WZ82 144 aa5.39□□□□□ -1.55
VIM-202ENST00000421459 TRAV4A0A0B4J268 109 aa5.39□□□□□ -1.55
VIM-202ENST00000421459 IGHV3-38A0A0C4DH36 116 aa5.39□□□□□ -1.55
VIM-202ENST00000421459 IBA57-AS1B1ANH7 110 aa5.39□□□□□ -1.55
VIM-202ENST00000421459 C9JCJ5 164 aa5.39□□□□□ -1.55
VIM-202ENST00000421459 DIRC3C9JPN6 131 aa5.39□□□□□ -1.55
VIM-202ENST00000421459 F6UZH7 168 aa5.39□□□□□ -1.55
VIM-202ENST00000421459 LECT2O14960 151 aa5.39□□□□□ -1.55
VIM-202ENST00000421459 ARPC5O15511 151 aa5.39□□□□□ -1.55
VIM-202ENST00000421459 OR7C2O60412 319 aa5.39□□□□□ -1.55
VIM-202ENST00000421459 ORM1P02763 201 aa5.39□□□□□ -1.55
VIM-202ENST00000421459 GATA1P15976 413 aaPredicted RBP5.39□□□□□ -1.55
VIM-202ENST00000421459 LINC01620Q4KN68 170 aa5.39□□□□□ -1.55
VIM-202ENST00000421459 Q6AWC8 147 aa5.39□□□□□ -1.55
VIM-202ENST00000421459 FAM159AQ6UWV7 190 aa5.39□□□□□ -1.55
VIM-202ENST00000421459 DPPA3Q6W0C5 159 aa5.39□□□□□ -1.55
VIM-202ENST00000421459 KCNRGQ8N5I3 272 aa5.39□□□□□ -1.55
VIM-202ENST00000421459 TVP23CQ96ET8 276 aa5.39□□□□□ -1.55
VIM-202ENST00000421459 TXNDC17Q9BRA2 123 aa5.39□□□□□ -1.55
VIM-202ENST00000421459 SPXQ9BT56 116 aa5.39□□□□□ -1.55
VIM-202ENST00000421459 TMEM70Q9BUB7 260 aa5.39□□□□□ -1.55
VIM-202ENST00000421459 TRGV11A0A075B6L2 103 aa5.38□□□□□ -1.55
VIM-202ENST00000421459 TRAV8-1A0A0A6YYK1 113 aa5.38□□□□□ -1.55
VIM-202ENST00000421459 A0A0D9SG52 128 aa5.38□□□□□ -1.55
VIM-202ENST00000421459 TYMSP04818 313 aa5.38□□□□□ -1.55
VIM-202ENST00000421459 CSN1S1P47710 185 aa5.38□□□□□ -1.55
VIM-202ENST00000421459 PPT1P50897 306 aa5.38□□□□□ -1.55
VIM-202ENST00000421459 OR10J3Q5JRS4 329 aa5.38□□□□□ -1.55
VIM-202ENST00000421459 SLC25A29Q8N8R3 303 aa5.38□□□□□ -1.55
VIM-202ENST00000421459 SGK494Q96LW2 274 aa5.38□□□□□ -1.55
VIM-202ENST00000421459 WDR61Q9GZS3 305 aaKnown RBP5.38□□□□□ -1.55
VIM-202ENST00000421459 HSPB11Q9Y547 144 aa5.38□□□□□ -1.55
VIM-202ENST00000421459 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.37□□□□□ -1.55
VIM-202ENST00000421459 TRBV7-9A0A0J9YWB2 115 aa5.37□□□□□ -1.55
VIM-202ENST00000421459 RBAKDNA6NC62 111 aa5.37□□□□□ -1.55
VIM-202ENST00000421459 PGPA6NDG6 321 aa5.37□□□□□ -1.55
VIM-202ENST00000421459 K7EP13 123 aa5.37□□□□□ -1.55
VIM-202ENST00000421459 M0R2P5 195 aa5.37□□□□□ -1.55
VIM-202ENST00000421459 RPL12P30050 165 aaKnown RBP5.37□□□□□ -1.55
VIM-202ENST00000421459 GNG5P63218 68 aa5.37□□□□□ -1.55
VIM-202ENST00000421459 UBE2L3P68036 154 aaKnown RBP5.37□□□□□ -1.55
VIM-202ENST00000421459 LINC01556Q5JQF7 62 aa5.37□□□□□ -1.55
VIM-202ENST00000421459 TMUB2Q71RG4 321 aa5.37□□□□□ -1.55
VIM-202ENST00000421459 LINC00528Q8N1L1 170 aa5.37□□□□□ -1.55
VIM-202ENST00000421459 C10orf126Q8N4M7 172 aa5.37□□□□□ -1.55
VIM-202ENST00000421459 INO80EQ8NBZ0 244 aaPredicted RBP5.37□□□□□ -1.55
VIM-202ENST00000421459 NTN5Q8WTR8 489 aaPredicted RBP5.37□□□□□ -1.55
VIM-202ENST00000421459 C11orf21Q9P2W6 132 aa5.37□□□□□ -1.55
VIM-202ENST00000421459 Q9UF83 564 aa5.37□□□□□ -1.55
VIM-202ENST00000421459 BOLA1Q9Y3E2 137 aa5.37□□□□□ -1.55
VIM-202ENST00000421459 HMGB3O15347 200 aaKnown RBP5.36□□□□□ -1.55
VIM-202ENST00000421459 BCL2L11O43521 198 aa5.36□□□□□ -1.55
VIM-202ENST00000421459 ZNF80P51504 273 aaPredicted RBP5.36□□□□□ -1.55
VIM-202ENST00000421459 TDRG1Q3Y452 100 aa5.36□□□□□ -1.55
VIM-202ENST00000421459 FFAR4Q5NUL3 377 aa5.36□□□□□ -1.55
VIM-202ENST00000421459 CFAP126Q5VTH2 177 aa5.36□□□□□ -1.55
VIM-202ENST00000421459 GOLT1AQ6ZVE7 132 aa5.36□□□□□ -1.55
VIM-202ENST00000421459 TMEM75Q8N9X5 138 aa5.36□□□□□ -1.55
VIM-202ENST00000421459 DNAJC30Q96LL9 226 aa5.36□□□□□ -1.55
VIM-202ENST00000421459 SMIM3Q9BZL3 60 aa5.36□□□□□ -1.55
VIM-202ENST00000421459 CYTL1Q9NRR1 136 aa5.36□□□□□ -1.55
VIM-202ENST00000421459 TRAV8-6A0A0B4J262 113 aa5.35□□□□□ -1.55
VIM-202ENST00000421459 TRAV21A0A0B4J279 112 aa5.35□□□□□ -1.55
VIM-202ENST00000421459 PGPEP1LA6NFU8 196 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms