RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 PRR31Q5SQ13 230 aa11.5□□□□□ -0.57
AP000550.1-201ENST00000420508 GTSF1Q8WW33 167 aa11.5□□□□□ -0.57
AP000550.1-201ENST00000420508 MRPL36Q9P0J6 103 aaKnown RBP11.49□□□□□ -0.57
AP000550.1-201ENST00000420508 GAGE12BA1L429 117 aa11.49□□□□□ -0.57
AP000550.1-201ENST00000420508 LY6LH3BQJ8 138 aa11.49□□□□□ -0.57
AP000550.1-201ENST00000420508 BVES-AS1Q5T3Y7 98 aa11.49□□□□□ -0.57
AP000550.1-201ENST00000420508 MRPL35Q9NZE8 188 aaKnown RBP11.49□□□□□ -0.57
AP000550.1-201ENST00000420508 PRB4P10163 310 aaPredicted RBP11.49□□□□□ -0.57
AP000550.1-201ENST00000420508 EMP1P54849 157 aa11.49□□□□□ -0.57
AP000550.1-201ENST00000420508 UBE2E2Q96LR5 201 aa11.49□□□□□ -0.57
AP000550.1-201ENST00000420508 SPAG8Q99932 426 aaPredicted RBP11.49□□□□□ -0.57
AP000550.1-201ENST00000420508 MEGF9Q9H1U4 602 aa11.49□□□□□ -0.57
AP000550.1-201ENST00000420508 USF3Q68DE3 2245 aa11.49□□□□□ -0.57
AP000550.1-201ENST00000420508 MCRIP2Q9BUT9 160 aaKnown RBP11.49□□□□□ -0.57
AP000550.1-201ENST00000420508 PGPEP1Q9NXJ5 209 aa11.49□□□□□ -0.57
AP000550.1-201ENST00000420508 COL6A6A6NMZ7 2263 aa11.49□□□□□ -0.57
AP000550.1-201ENST00000420508 TRAV8-2A0A0B4J237 113 aa11.48□□□□□ -0.57
AP000550.1-201ENST00000420508 IGLV2-8P01709 118 aa11.48□□□□□ -0.57
AP000550.1-201ENST00000420508 DEFB113Q30KQ7 82 aa11.48□□□□□ -0.57
AP000550.1-201ENST00000420508 MLST8Q9BVC4 326 aa11.48□□□□□ -0.57
AP000550.1-201ENST00000420508 TRAV12-1A0A0B4J245 112 aa11.48□□□□□ -0.57
AP000550.1-201ENST00000420508 CRPP02741 224 aa11.48□□□□□ -0.57
AP000550.1-201ENST00000420508 ZFP36P26651 326 aaKnown RBP11.48□□□□□ -0.57
AP000550.1-201ENST00000420508 SLC25A20O43772 301 aa11.48□□□□□ -0.57
AP000550.1-201ENST00000420508 LEPROTO15243 131 aa11.47□□□□□ -0.57
AP000550.1-201ENST00000420508 HLA-DMBP28068 263 aa11.47□□□□□ -0.57
AP000550.1-201ENST00000420508 MBD6Q96DN6 1003 aa11.47□□□□□ -0.57
AP000550.1-201ENST00000420508 EXPH5Q8NEV8 1989 aa11.47□□□□□ -0.57
AP000550.1-201ENST00000420508 TRAV25A0A0B4J276 109 aa11.47□□□□□ -0.57
AP000550.1-201ENST00000420508 K7EP34 96 aa11.47□□□□□ -0.57
AP000550.1-201ENST00000420508 HOXD3P31249 432 aaPredicted RBP11.47□□□□□ -0.57
AP000550.1-201ENST00000420508 SPATA12Q7Z6I5 190 aa11.47□□□□□ -0.57
AP000550.1-201ENST00000420508 CEND1Q8N111 149 aa11.47□□□□□ -0.57
AP000550.1-201ENST00000420508 PRORYQ9H606 182 aa11.47□□□□□ -0.57
AP000550.1-201ENST00000420508 IGHV3-73A0A0B4J1V6 119 aa11.47□□□□□ -0.57
AP000550.1-201ENST00000420508 SS18Q15532 418 aa11.47□□□□□ -0.57
AP000550.1-201ENST00000420508 TRBV25-1A0A075B6N4 114 aa11.46□□□□□ -0.57
AP000550.1-201ENST00000420508 IGHV4-30-2A0A087WSY4 118 aa11.46□□□□□ -0.57
AP000550.1-201ENST00000420508 TRAV8-4A0A0B4J246 113 aa11.46□□□□□ -0.57
AP000550.1-201ENST00000420508 A6NDX4 124 aa11.46□□□□□ -0.57
AP000550.1-201ENST00000420508 WNK2Q9Y3S1 2297 aa11.46□□□□□ -0.57
AP000550.1-201ENST00000420508 F8W1H4 67 aa11.46□□□□□ -0.57
AP000550.1-201ENST00000420508 IGHV4-59P01825 116 aa11.46□□□□□ -0.57
AP000550.1-201ENST00000420508 SCGB1A1P11684 91 aa11.46□□□□□ -0.57
AP000550.1-201ENST00000420508 C1orf159Q96HA4 380 aa11.46□□□□□ -0.57
AP000550.1-201ENST00000420508 AJUBAQ96IF1 538 aa11.46□□□□□ -0.58
AP000550.1-201ENST00000420508 ODF3Q96PU9 254 aa11.46□□□□□ -0.58
AP000550.1-201ENST00000420508 HIGD1BQ9P298 99 aa11.46□□□□□ -0.58
AP000550.1-201ENST00000420508 TSSC4Q9Y5U2 329 aaPredicted RBP11.46□□□□□ -0.58
AP000550.1-201ENST00000420508 AZU1P20160 251 aa11.46□□□□□ -0.58
AP000550.1-201ENST00000420508 C10orf126Q8N4M7 172 aa11.46□□□□□ -0.58
AP000550.1-201ENST00000420508 SPANXA1Q9NS26 97 aa11.46□□□□□ -0.58
AP000550.1-201ENST00000420508 KLK9Q9UKQ9 250 aa11.46□□□□□ -0.58
AP000550.1-201ENST00000420508 TNFRSF13BO14836 293 aaPredicted RBP11.45□□□□□ -0.58
AP000550.1-201ENST00000420508 CKS1BP61024 79 aa11.45□□□□□ -0.58
AP000550.1-201ENST00000420508 LINC00158P58513 81 aa11.45□□□□□ -0.58
AP000550.1-201ENST00000420508 LMO4P61968 165 aa11.45□□□□□ -0.58
AP000550.1-201ENST00000420508 PCNX1Q96RV3 2341 aa11.45□□□□□ -0.58
AP000550.1-201ENST00000420508 J3QKU1 62 aa11.45□□□□□ -0.58
AP000550.1-201ENST00000420508 NUPR1O60356 82 aa11.45□□□□□ -0.58
AP000550.1-201ENST00000420508 TSPAN13O95857 204 aa11.45□□□□□ -0.58
AP000550.1-201ENST00000420508 IGHV4-38-2P0DP08 117 aa11.45□□□□□ -0.58
AP000550.1-201ENST00000420508 HERVK_113P63121 156 aa11.45□□□□□ -0.58
AP000550.1-201ENST00000420508 DEFB125Q8N687 156 aa11.45□□□□□ -0.58
AP000550.1-201ENST00000420508 SPANXDQ9BXN6 97 aa11.45□□□□□ -0.58
AP000550.1-201ENST00000420508 TRAV26-2A0A0B4J265 109 aa11.44□□□□□ -0.58
AP000550.1-201ENST00000420508 IGF1P05019 195 aa11.44□□□□□ -0.58
AP000550.1-201ENST00000420508 C11orf71Q6IPW1 123 aa11.44□□□□□ -0.58
AP000550.1-201ENST00000420508 C11orf44Q8N8P7 122 aa11.44□□□□□ -0.58
AP000550.1-201ENST00000420508 SFTA2Q6UW10 78 aa11.44□□□□□ -0.58
AP000550.1-201ENST00000420508 C1orf229Q6ZS94 237 aaPredicted RBP11.44□□□□□ -0.58
AP000550.1-201ENST00000420508 TMEM243Q9BU79 118 aa11.44□□□□□ -0.58
AP000550.1-201ENST00000420508 LRRC75A-AS1Q8N1F1 130 aa11.43□□□□□ -0.58
AP000550.1-201ENST00000420508 SCRT2Q9NQ03 307 aa11.43□□□□□ -0.58
AP000550.1-201ENST00000420508 CHD3Q12873 2000 aaKnown RBP11.43□□□□□ -0.58
AP000550.1-201ENST00000420508 IGHV3-64A0A075B6Q5 118 aa11.43□□□□□ -0.58
AP000550.1-201ENST00000420508 MYCNOSP40205 109 aa11.43□□□□□ -0.58
AP000550.1-201ENST00000420508 PRIMA1Q86XR5 153 aa11.43□□□□□ -0.58
AP000550.1-201ENST00000420508 RPL35AP18077 110 aaKnown RBP11.43□□□□□ -0.58
AP000550.1-201ENST00000420508 IGKV3D-20A0A0C4DH25 116 aa11.43□□□□□ -0.58
AP000550.1-201ENST00000420508 A0A1W2PPM0 123 aa11.42□□□□□ -0.58
AP000550.1-201ENST00000420508 XCL2Q9UBD3 114 aa11.42□□□□□ -0.58
AP000550.1-201ENST00000420508 APOC4P55056 127 aa11.42□□□□□ -0.58
AP000550.1-201ENST00000420508 J3QQQ9 107 aa11.42□□□□□ -0.58
AP000550.1-201ENST00000420508 LOXL1Q08397 574 aaPredicted RBP11.42□□□□□ -0.58
AP000550.1-201ENST00000420508 PRSS47A8MTI9 375 aa11.41□□□□□ -0.58
AP000550.1-201ENST00000420508 CST9LQ9H4G1 147 aa11.41□□□□□ -0.58
AP000550.1-201ENST00000420508 DKK2Q9UBU2 259 aa11.41□□□□□ -0.58
AP000550.1-201ENST00000420508 PRSS29PA6NIE9 313 aa11.41□□□□□ -0.58
AP000550.1-201ENST00000420508 OCIAD2Q56VL3 154 aa11.41□□□□□ -0.58
AP000550.1-201ENST00000420508 CDPF1Q6NVV7 123 aa11.41□□□□□ -0.58
AP000550.1-201ENST00000420508 HTN3P15516 51 aa11.4□□□□□ -0.58
AP000550.1-201ENST00000420508 TIMM17AQ99595 171 aa11.4□□□□□ -0.58
AP000550.1-201ENST00000420508 TRAV12-2A0A075B6T6 113 aa11.4□□□□□ -0.58
AP000550.1-201ENST00000420508 KNCNA6PVL3 124 aa11.4□□□□□ -0.58
AP000550.1-201ENST00000420508 C6orf226Q5I0X4 101 aa11.4□□□□□ -0.58
AP000550.1-201ENST00000420508 S100A7L2Q5SY68 101 aa11.4□□□□□ -0.58
AP000550.1-201ENST00000420508 PHLDA1Q8WV24 401 aaPredicted RBP11.4□□□□□ -0.58
AP000550.1-201ENST00000420508 POLEQ07864 2286 aa11.4□□□□□ -0.58
AP000550.1-201ENST00000420508 ARHGAP21Q5T5U3 1957 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms