RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 A0A1B0GW15 77 aa15.65■□□□□ 0.1
GPC1-202ENST00000420138 SNRPD3P62318 126 aaKnown RBP15.65■□□□□ 0.1
GPC1-202ENST00000420138 LINC01559Q495D7 138 aa15.65■□□□□ 0.1
GPC1-202ENST00000420138 APRG1Q8IVJ8 170 aa15.65■□□□□ 0.1
GPC1-202ENST00000420138 NAGKQ9UJ70 344 aa15.65■□□□□ 0.1
GPC1-202ENST00000420138 IGKV3D-20A0A0C4DH25 116 aa15.64■□□□□ 0.09
GPC1-202ENST00000420138 TSTD3H0UI37 97 aa15.64■□□□□ 0.09
GPC1-202ENST00000420138 TRBV7-9A0A0J9YWB2 115 aa15.64■□□□□ 0.09
GPC1-202ENST00000420138 AMTP48728 403 aa15.64■□□□□ 0.09
GPC1-202ENST00000420138 TRAV2A0A0B4J234 112 aa15.63■□□□□ 0.09
GPC1-202ENST00000420138 A0A0J9YX75 114 aa15.63■□□□□ 0.09
GPC1-202ENST00000420138 ZNF324O75467 553 aaPredicted RBP15.63■□□□□ 0.09
GPC1-202ENST00000420138 ARMS2P0C7Q2 107 aa15.63■□□□□ 0.09
GPC1-202ENST00000420138 RPS20P60866 119 aaKnown RBP15.63■□□□□ 0.09
GPC1-202ENST00000420138 GATD1Q8NB37 220 aa15.63■□□□□ 0.09
GPC1-202ENST00000420138 BORCS7Q96B45 105 aa15.63■□□□□ 0.09
GPC1-202ENST00000420138 SIGLEC8Q9NYZ4 499 aa15.63■□□□□ 0.09
GPC1-202ENST00000420138 ORM1P02763 201 aa15.62■□□□□ 0.09
GPC1-202ENST00000420138 CD33P20138 364 aa15.62■□□□□ 0.09
GPC1-202ENST00000420138 KIR3DS1Q14943 382 aa15.62■□□□□ 0.09
GPC1-202ENST00000420138 CD300EQ496F6 205 aaPredicted RBP15.62■□□□□ 0.09
GPC1-202ENST00000420138 DYNLRB2Q8TF09 96 aa15.62■□□□□ 0.09
GPC1-202ENST00000420138 PRO1933Q9H354 126 aa15.62■□□□□ 0.09
GPC1-202ENST00000420138 LOC102724200A0A096LPH7 203 aaPredicted RBP15.61■□□□□ 0.09
GPC1-202ENST00000420138 IGLC6P0CF74 106 aa15.61■□□□□ 0.09
GPC1-202ENST00000420138 PMCHP20382 165 aa15.61■□□□□ 0.09
GPC1-202ENST00000420138 NSUN5P1Q3KNT7 163 aa15.61■□□□□ 0.09
GPC1-202ENST00000420138 ZNF664Q8N3J9 261 aa15.61■□□□□ 0.09
GPC1-202ENST00000420138 JMJD1CQ15652 2540 aa15.61■□□□□ 0.09
GPC1-202ENST00000420138 PRR31Q5SQ13 230 aa15.6■□□□□ 0.09
GPC1-202ENST00000420138 LYZL1Q6UWQ5 148 aa15.6■□□□□ 0.09
GPC1-202ENST00000420138 TPPP3Q9BW30 176 aa15.6■□□□□ 0.09
GPC1-202ENST00000420138 KLLNB2CW77 178 aa15.59■□□□□ 0.09
GPC1-202ENST00000420138 J3KRW8 73 aa15.59■□□□□ 0.09
GPC1-202ENST00000420138 NDUFA11Q86Y39 141 aa15.59■□□□□ 0.09
GPC1-202ENST00000420138 CTRLP40313 264 aa15.59■□□□□ 0.09
GPC1-202ENST00000420138 ZNF256Q9Y2P7 627 aaPredicted RBP15.59■□□□□ 0.09
GPC1-202ENST00000420138 HSBP1O75506 76 aa15.58■□□□□ 0.08
GPC1-202ENST00000420138 CTAG1AP78358 180 aa15.58■□□□□ 0.08
GPC1-202ENST00000420138 FOXI2Q6ZQN5 318 aa15.57■□□□□ 0.08
GPC1-202ENST00000420138 NIT1Q86X76 327 aa15.57■□□□□ 0.08
GPC1-202ENST00000420138 FAM19A2Q8N3H0 131 aa15.57■□□□□ 0.08
GPC1-202ENST00000420138 FER1L6-AS1Q8NA97 138 aa15.57■□□□□ 0.08
GPC1-202ENST00000420138 ODF3Q96PU9 254 aa15.57■□□□□ 0.08
GPC1-202ENST00000420138 NTF3P20783 257 aa15.57■□□□□ 0.08
GPC1-202ENST00000420138 DDTP30046 118 aa15.57■□□□□ 0.08
GPC1-202ENST00000420138 EBLN2Q6P2I7 272 aa15.57■□□□□ 0.08
GPC1-202ENST00000420138 RNASEKQ6P5S7 137 aaKnown RBP15.57■□□□□ 0.08
GPC1-202ENST00000420138 ZNF493Q6ZR52 646 aa15.57■□□□□ 0.08
GPC1-202ENST00000420138 TRAV25A0A0B4J276 109 aa15.56■□□□□ 0.08
GPC1-202ENST00000420138 TRAV21A0A0B4J279 112 aa15.56■□□□□ 0.08
GPC1-202ENST00000420138 RNASE4P34096 147 aaKnown RBP15.56■□□□□ 0.08
GPC1-202ENST00000420138 DEFB131AP59861 70 aa15.56■□□□□ 0.08
GPC1-202ENST00000420138 KRTDAPP60985 99 aa15.56■□□□□ 0.08
GPC1-202ENST00000420138 SPAG8Q99932 426 aaPredicted RBP15.56■□□□□ 0.08
GPC1-202ENST00000420138 KRTAP24-1Q3LI83 254 aa15.55■□□□□ 0.08
GPC1-202ENST00000420138 AMTNQ6UX39 209 aa15.55■□□□□ 0.08
GPC1-202ENST00000420138 CNFNQ9BYD5 112 aa15.55■□□□□ 0.08
GPC1-202ENST00000420138 WNK1Q9H4A3 2382 aa15.55■□□□□ 0.08
GPC1-202ENST00000420138 MUC21A0A0G2JKD1 596 aa15.54■□□□□ 0.08
GPC1-202ENST00000420138 MUC21A0A140T8X8 626 aa15.54■□□□□ 0.08
GPC1-202ENST00000420138 MUC21Q5SSG8 566 aa15.54■□□□□ 0.08
GPC1-202ENST00000420138 CHCHD1Q96BP2 118 aaKnown RBP15.54■□□□□ 0.08
GPC1-202ENST00000420138 URB1-AS1Q96HZ7 61 aa15.54■□□□□ 0.08
GPC1-202ENST00000420138 MAP6D1Q9H9H5 199 aa15.54■□□□□ 0.08
GPC1-202ENST00000420138 A8MTW9 85 aa15.54■□□□□ 0.08
GPC1-202ENST00000420138 IGKV3-20P01619 116 aa15.54■□□□□ 0.08
GPC1-202ENST00000420138 DEFA6Q01524 100 aa15.54■□□□□ 0.08
GPC1-202ENST00000420138 ZNF124Q15973 351 aa15.54■□□□□ 0.08
GPC1-202ENST00000420138 TEX43Q6ZNM6 134 aa15.54■□□□□ 0.08
GPC1-202ENST00000420138 PRIMA1Q86XR5 153 aa15.54■□□□□ 0.08
GPC1-202ENST00000420138 KNCNA6PVL3 124 aa15.53■□□□□ 0.08
GPC1-202ENST00000420138 M0R2Z0 102 aa15.53■□□□□ 0.08
GPC1-202ENST00000420138 DUSP14O95147 198 aaKnown RBP15.53■□□□□ 0.08
GPC1-202ENST00000420138 OR4C46A6NHA9 309 aa15.52■□□□□ 0.08
GPC1-202ENST00000420138 DMRTA1Q5VZB9 504 aa15.52■□□□□ 0.08
GPC1-202ENST00000420138 HLA-DRB4P13762 266 aa15.52■□□□□ 0.07
GPC1-202ENST00000420138 LEPP41159 167 aa15.52■□□□□ 0.07
GPC1-202ENST00000420138 ANXA2RQ3ZCQ2 193 aa15.52■□□□□ 0.07
GPC1-202ENST00000420138 CITED1Q99966 193 aa15.52■□□□□ 0.07
GPC1-202ENST00000420138 HLA-DRB4X5D2U9 266 aa15.52■□□□□ 0.07
GPC1-202ENST00000420138 H3BMM0 161 aa15.51■□□□□ 0.07
GPC1-202ENST00000420138 C3orf79P0CE67 100 aa15.51■□□□□ 0.07
GPC1-202ENST00000420138 SSTP61278 116 aa15.51■□□□□ 0.07
GPC1-202ENST00000420138 Q8N976 141 aa15.51■□□□□ 0.07
GPC1-202ENST00000420138 SAP30O75446 220 aa15.5■□□□□ 0.07
GPC1-202ENST00000420138 LINC00614P0C842 121 aa15.5■□□□□ 0.07
GPC1-202ENST00000420138 ODF3L2Q3SX64 289 aa15.5■□□□□ 0.07
GPC1-202ENST00000420138 RBMY1BA6NDE4 496 aaKnown RBP15.5■□□□□ 0.07
GPC1-202ENST00000420138 RBMY1EA6NEQ0 496 aaKnown RBP15.5■□□□□ 0.07
GPC1-202ENST00000420138 SNAI2O43623 268 aa15.5■□□□□ 0.07
GPC1-202ENST00000420138 IGLV1-51P01701 117 aa15.5■□□□□ 0.07
GPC1-202ENST00000420138 RBMY1DP0C7P1 496 aaKnown RBP15.5■□□□□ 0.07
GPC1-202ENST00000420138 FAM104BQ5XKR9 115 aa15.5■□□□□ 0.07
GPC1-202ENST00000420138 LINC00482Q8N8I6 264 aa15.5■□□□□ 0.07
GPC1-202ENST00000420138 MSRB1Q9NZV6 116 aa15.5■□□□□ 0.07
GPC1-202ENST00000420138 TRAV12-2A0A075B6T6 113 aa15.49■□□□□ 0.07
GPC1-202ENST00000420138 KIR2DL5BA0A0G2JN68 375 aa15.49■□□□□ 0.07
GPC1-202ENST00000420138 KIR2DL5BA0A0G2JPC4 375 aa15.49■□□□□ 0.07
GPC1-202ENST00000420138 C7orf71A4D174 169 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms