RNA–Protein interactions for RNA: ENST00000420047.1

SEMA3A-202, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-202ENST00000420047 DNAJC4Q9NNZ3 241 aa2.35□□□□□ -2.03
SEMA3A-202ENST00000420047 NUDT15Q9NV35 164 aa2.35□□□□□ -2.03
SEMA3A-202ENST00000420047 RABL2AQ9UBK7 228 aaPredicted RBP2.35□□□□□ -2.03
SEMA3A-202ENST00000420047 DNAH6Q9C0G6 4158 aa2.35□□□□□ -2.03
SEMA3A-202ENST00000420047 HECTD4Q9Y4D8 3996 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 A0A087X0K7 114 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 LOC100131303A0A0U1RQF7 123 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 NBDYA0A0U1RRE5 68 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 TMEM189A5PLL7 270 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 NAP1L6A6NFF2 107 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 E5RGE8 158 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 PRAF2O60831 178 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 ZNF324O75467 553 aaPredicted RBP2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 INSP01308 110 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 SMR3BP02814 79 aaPredicted RBP2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 ATP5G1P05496 136 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 FABP1P07148 127 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 IGLC2P0DOY2 106 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 FGF7P21781 194 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 CDKN1BP46527 198 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 ATP5G3P48201 142 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 ATP5IP56385 69 aaPredicted RBP2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 TCTAP57738 103 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 TAS2R60P59551 318 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 CLINT1Q14677 625 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 CNPY1Q3B7I2 92 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 SPATA12Q7Z6I5 190 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 BPIFA4PQ86YQ2 179 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 C11orf72Q8NBR9 251 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 FAM167A-AS1Q96KT0 104 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 HYLS1Q96M11 299 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 SLC25A2Q9BXI2 301 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 GPN1Q9HCN4 374 aaPredicted RBP2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 SLC39A9Q9NUM3 307 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 MRPL16Q9NX20 251 aaKnown RBP2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 PTTG2Q9NZH5 202 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 Q9UF83 564 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 WDR83OSQ9Y284 106 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 TIMM8BQ9Y5J9 83 aaPredicted RBP2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 PXMP4Q9Y6I8 212 aa2.34□□□□□ -2.03
SEMA3A-202ENST00000420047 LRP1BQ9NZR2 4599 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 TRBV19A0A075B6N1 114 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 TRGV1A0A0A0MS02 117 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 IGHV3-16A0A0C4DH30 117 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 FAM240BA0A1B0GVZ2 78 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 LYRM9A8MSI8 78 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 CENPXA8MT69 81 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 C16orf90A8MZG2 172 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 EPM2AB3EWF7 344 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 CFDP00746 253 aaPredicted RBP2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 NBEAP1P0C6P0 100 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 RPL29P47914 159 aaKnown RBP2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 MEOX2P50222 304 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 H2BFSP57053 126 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 B2MP61769 119 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 SELENOTP62341 195 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 RANP62826 216 aaKnown RBP2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 GNG5P63218 68 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 ZNF846Q147U1 533 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 OXA1LQ15070 435 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 RNF212Q495C1 297 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 Q5BKY6 102 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 LINC00336Q6ZUF6 198 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 C6orf223Q8N319 242 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 ZFAND2AQ8N6M9 145 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 MAPKAPK5-AS1Q8N8E1 139 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 TMEM75Q8N9X5 138 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 OR5C1Q8NGR4 320 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 OR10J6PQ8NGY7 276 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 GNPNAT1Q96EK6 184 aaPredicted RBP2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 TVP23CQ96ET8 276 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 PHYHIPLQ96FC7 376 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 FAM19A4Q96LR4 140 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 UQCC1Q9NVA1 299 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 RPH3ALQ9UNE2 315 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 TIMM9Q9Y5J7 89 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 HSPG2P98160 4391 aa2.33□□□□□ -2.04
SEMA3A-202ENST00000420047 TRAV8-1A0A0A6YYK1 113 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 IGHV3-73A0A0B4J1V6 119 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 C7orf71A4D174 169 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 PGPA6NDG6 321 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 SNURFLB1AK76 121 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 F6UZH7 168 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 INMT-MINDY4F8WBC2 141 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 H7BYZ3 331 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 RLN2P04090 185 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 GPX1P07203 203 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 HIST1H1EP10412 219 aaKnown RBP2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 TSPOP30536 169 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 NUP62P37198 522 aaPredicted RBP2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 SULT1A1P50225 295 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 ZNF80P51504 273 aaPredicted RBP2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 CCL18P55774 89 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 LINC00315P59091 139 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 TAS2R30P59541 319 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 VWC2Q2TAL6 325 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 LYPD5Q6UWN5 251 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 LCN15Q6UWW0 184 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 DPPA3Q6W0C5 159 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 Q6ZRG5 221 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms