RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 SPINK13Q1W4C9 94 aa10.45□□□□□ -0.74
SHMT1P1-201ENST00000419974 KPRPQ5T749 579 aaPredicted RBP10.45□□□□□ -0.74
SHMT1P1-201ENST00000419974 WDR73Q6P4I2 378 aa10.45□□□□□ -0.74
SHMT1P1-201ENST00000419974 TMEM88Q6PEY1 159 aa10.45□□□□□ -0.74
SHMT1P1-201ENST00000419974 KIR2DL5AQ8N109 375 aa10.45□□□□□ -0.74
SHMT1P1-201ENST00000419974 TMEM256Q8N2U0 113 aa10.45□□□□□ -0.74
SHMT1P1-201ENST00000419974 KIR2DL5BQ8NHK3 375 aa10.45□□□□□ -0.74
SHMT1P1-201ENST00000419974 SSBP4Q9BWG4 385 aaPredicted RBP10.45□□□□□ -0.74
SHMT1P1-201ENST00000419974 CNFNQ9BYD5 112 aa10.45□□□□□ -0.74
SHMT1P1-201ENST00000419974 C11orf21Q9P2W6 132 aa10.45□□□□□ -0.74
SHMT1P1-201ENST00000419974 F2Z2F3 143 aa10.44□□□□□ -0.74
SHMT1P1-201ENST00000419974 M0R2Z0 102 aa10.44□□□□□ -0.74
SHMT1P1-201ENST00000419974 IGLC6P0CF74 106 aa10.44□□□□□ -0.74
SHMT1P1-201ENST00000419974 RNASE4P34096 147 aaKnown RBP10.44□□□□□ -0.74
SHMT1P1-201ENST00000419974 RPL19P84098 196 aaKnown RBP10.44□□□□□ -0.74
SHMT1P1-201ENST00000419974 OXLD1Q5BKU9 147 aa10.44□□□□□ -0.74
SHMT1P1-201ENST00000419974 RASL11AQ6T310 242 aa10.44□□□□□ -0.74
SHMT1P1-201ENST00000419974 ATP5L2Q7Z4Y8 100 aa10.44□□□□□ -0.74
SHMT1P1-201ENST00000419974 NEU1Q99519 415 aa10.44□□□□□ -0.74
SHMT1P1-201ENST00000419974 SORL1Q92673 2214 aa10.43□□□□□ -0.74
SHMT1P1-201ENST00000419974 ORM1P02763 201 aa10.43□□□□□ -0.74
SHMT1P1-201ENST00000419974 GIG44P09565 113 aaPredicted RBP10.43□□□□□ -0.74
SHMT1P1-201ENST00000419974 KIR3DS1Q14943 382 aa10.43□□□□□ -0.74
SHMT1P1-201ENST00000419974 DEFB125Q8N687 156 aa10.43□□□□□ -0.74
SHMT1P1-201ENST00000419974 GTSF1Q8WW33 167 aa10.43□□□□□ -0.74
SHMT1P1-201ENST00000419974 NOTCH3Q9UM47 2321 aa10.42□□□□□ -0.74
SHMT1P1-201ENST00000419974 HIGD1CA8MV81 97 aa10.42□□□□□ -0.74
SHMT1P1-201ENST00000419974 CA1P00915 261 aaPredicted RBP10.42□□□□□ -0.74
SHMT1P1-201ENST00000419974 INSP01308 110 aa10.42□□□□□ -0.74
SHMT1P1-201ENST00000419974 IGKV3-20P01619 116 aa10.42□□□□□ -0.74
SHMT1P1-201ENST00000419974 OR5AL1P0C617 328 aa10.42□□□□□ -0.74
SHMT1P1-201ENST00000419974 CTRLP40313 264 aa10.42□□□□□ -0.74
SHMT1P1-201ENST00000419974 KRTAP10-11P60412 298 aa10.42□□□□□ -0.74
SHMT1P1-201ENST00000419974 ANXA2RQ3ZCQ2 193 aa10.42□□□□□ -0.74
SHMT1P1-201ENST00000419974 COX19Q49B96 90 aa10.42□□□□□ -0.74
SHMT1P1-201ENST00000419974 CSNK1G2-AS1Q8NCQ2 148 aa10.42□□□□□ -0.74
SHMT1P1-201ENST00000419974 NUP35Q8NFH5 326 aa10.42□□□□□ -0.74
SHMT1P1-201ENST00000419974 IGHV4-4A0A075B6R2 117 aa10.41□□□□□ -0.74
SHMT1P1-201ENST00000419974 IGHV1OR15-1A0A075B7D0 117 aa10.41□□□□□ -0.74
SHMT1P1-201ENST00000419974 TRAV12-3A0A0B4J271 114 aa10.41□□□□□ -0.74
SHMT1P1-201ENST00000419974 A0A1B0GW15 77 aa10.41□□□□□ -0.74
SHMT1P1-201ENST00000419974 G3V4G9 280 aa10.41□□□□□ -0.74
SHMT1P1-201ENST00000419974 SNAI2O43623 268 aa10.41□□□□□ -0.74
SHMT1P1-201ENST00000419974 FAM159AQ6UWV7 190 aa10.41□□□□□ -0.74
SHMT1P1-201ENST00000419974 CSTL1Q9H114 145 aa10.41□□□□□ -0.74
SHMT1P1-201ENST00000419974 WFDC10AQ9H1F0 79 aa10.41□□□□□ -0.74
SHMT1P1-201ENST00000419974 SCRT2Q9NQ03 307 aa10.41□□□□□ -0.74
SHMT1P1-201ENST00000419974 TRAV12-2A0A075B6T6 113 aa10.4□□□□□ -0.74
SHMT1P1-201ENST00000419974 LOC102724200A0A096LPH7 203 aaPredicted RBP10.4□□□□□ -0.74
SHMT1P1-201ENST00000419974 UBE2CO00762 179 aa10.4□□□□□ -0.74
SHMT1P1-201ENST00000419974 FAM3BP58499 235 aaPredicted RBP10.4□□□□□ -0.74
SHMT1P1-201ENST00000419974 SRD5A3Q9H8P0 318 aa10.4□□□□□ -0.74
SHMT1P1-201ENST00000419974 RBMY1A1P0DJD3 496 aaKnown RBP10.39□□□□□ -0.75
SHMT1P1-201ENST00000419974 RBMY1CP0DJD4 496 aa10.39□□□□□ -0.75
SHMT1P1-201ENST00000419974 RBMY1FQ15415 496 aaKnown RBP10.39□□□□□ -0.75
SHMT1P1-201ENST00000419974 PIK3CD-AS1Q5SR53 167 aa10.39□□□□□ -0.75
SHMT1P1-201ENST00000419974 Q6ZQT7 251 aa10.39□□□□□ -0.75
SHMT1P1-201ENST00000419974 FER1L6-AS1Q8NA97 138 aa10.39□□□□□ -0.75
SHMT1P1-201ENST00000419974 GATD1Q8NB37 220 aa10.39□□□□□ -0.75
SHMT1P1-201ENST00000419974 PTH2Q96A98 100 aa10.39□□□□□ -0.75
SHMT1P1-201ENST00000419974 FAM210BQ96KR6 192 aa10.39□□□□□ -0.75
SHMT1P1-201ENST00000419974 URGCP-MRPS24S4R325 110 aa10.39□□□□□ -0.75
SHMT1P1-201ENST00000419974 TRGV11A0A075B6L2 103 aa10.38□□□□□ -0.75
SHMT1P1-201ENST00000419974 A0A1B0GXF2 115 aa10.38□□□□□ -0.75
SHMT1P1-201ENST00000419974 J3KRW8 73 aa10.38□□□□□ -0.75
SHMT1P1-201ENST00000419974 ASIPP42127 132 aa10.38□□□□□ -0.75
SHMT1P1-201ENST00000419974 APOC4P55056 127 aa10.38□□□□□ -0.75
SHMT1P1-201ENST00000419974 ZNF705AQ6ZN79 300 aaPredicted RBP10.38□□□□□ -0.75
SHMT1P1-201ENST00000419974 C1orf158Q8N1D5 194 aa10.38□□□□□ -0.75
SHMT1P1-201ENST00000419974 TGIF2-C20orf24A0A0A6YYL0 155 aa10.37□□□□□ -0.75
SHMT1P1-201ENST00000419974 IGHV3-16A0A0C4DH30 117 aa10.37□□□□□ -0.75
SHMT1P1-201ENST00000419974 A0A1B0GUT8 65 aa10.37□□□□□ -0.75
SHMT1P1-201ENST00000419974 NXPH4O95158 308 aa10.37□□□□□ -0.75
SHMT1P1-201ENST00000419974 IGHV4-30-4P0DP06 118 aa10.37□□□□□ -0.75
SHMT1P1-201ENST00000419974 RNASE3P12724 160 aaKnown RBP10.37□□□□□ -0.75
SHMT1P1-201ENST00000419974 RAB5AP20339 215 aa10.37□□□□□ -0.75
SHMT1P1-201ENST00000419974 NDUFAF3Q9BU61 184 aa10.37□□□□□ -0.75
SHMT1P1-201ENST00000419974 GNB1LQ9BYB4 327 aa10.37□□□□□ -0.75
SHMT1P1-201ENST00000419974 XCL2Q9UBD3 114 aa10.37□□□□□ -0.75
SHMT1P1-201ENST00000419974 S100A8P05109 93 aa10.36□□□□□ -0.75
SHMT1P1-201ENST00000419974 GZMBP10144 247 aa10.36□□□□□ -0.75
SHMT1P1-201ENST00000419974 CACNG7P62955 275 aa10.36□□□□□ -0.75
SHMT1P1-201ENST00000419974 LYZL1Q6UWQ5 148 aa10.36□□□□□ -0.75
SHMT1P1-201ENST00000419974 C9orf85Q96MD7 179 aa10.36□□□□□ -0.75
SHMT1P1-201ENST00000419974 GOLT1BQ9Y3E0 138 aa10.36□□□□□ -0.75
SHMT1P1-201ENST00000419974 AGRNO00468 2067 aa10.36□□□□□ -0.75
SHMT1P1-201ENST00000419974 TMSB15BA0A087X1C1 80 aa10.35□□□□□ -0.75
SHMT1P1-201ENST00000419974 SMIM9A6NGZ8 99 aa10.35□□□□□ -0.75
SHMT1P1-201ENST00000419974 MT-ND6P03923 174 aa10.35□□□□□ -0.75
SHMT1P1-201ENST00000419974 RPL35AP18077 110 aaKnown RBP10.35□□□□□ -0.75
SHMT1P1-201ENST00000419974 TCL1AP56279 114 aa10.35□□□□□ -0.75
SHMT1P1-201ENST00000419974 FXYD7P58549 80 aa10.35□□□□□ -0.75
SHMT1P1-201ENST00000419974 RIGQ13278 110 aa10.35□□□□□ -0.75
SHMT1P1-201ENST00000419974 ZNF493Q6ZR52 646 aa10.35□□□□□ -0.75
SHMT1P1-201ENST00000419974 Q6ZWC4 215 aa10.35□□□□□ -0.75
SHMT1P1-201ENST00000419974 BORCS7Q96B45 105 aa10.35□□□□□ -0.75
SHMT1P1-201ENST00000419974 PGLYRP4Q96LB8 373 aa10.35□□□□□ -0.75
SHMT1P1-201ENST00000419974 GNRH2O43555 120 aa10.34□□□□□ -0.75
SHMT1P1-201ENST00000419974 ARMS2P0C7Q2 107 aa10.34□□□□□ -0.75
SHMT1P1-201ENST00000419974 HBBP68871 147 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms