RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 EVI2AP22794 236 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 GLRXP35754 106 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 FABP6P51161 128 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 ZNF137PP52743 207 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 LYZP61626 148 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 GNG5P63218 68 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 NDPQ00604 133 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 PDE6HQ13956 83 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 ALKBH6Q3KRA9 238 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 LYRM7Q5U5X0 104 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 TEX36Q5VZQ5 186 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 PATE2Q6UY27 113 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 FOXI2Q6ZQN5 318 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 Q6ZVH6 145 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 ASCL5Q7RTU5 278 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 LHFPL4Q7Z7J7 247 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 ORMDL3Q8N138 153 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 KIR3DL3Q8N743 410 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 ATP6V0E2Q8NHE4 81 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 ZNF502Q8TBZ5 544 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 ARPC1AQ92747 370 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 IFI27L1Q96BM0 104 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 ZNF414Q96IQ9 312 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 PRELID3AQ96N28 172 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 KIR2DL4Q99706 377 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 RNF5Q99942 180 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 MAP1LC3AQ9H492 121 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 NXT2Q9NPJ8 142 aaKnown RBP1.9□□□□□ -2.11
VPS41-206ENST00000418457 SPANXA1Q9NS26 97 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 HIGD1AQ9Y241 93 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 CABIN1Q9Y6J0 2220 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 CACNA1DQ01668 2161 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 KMT2BQ9UMN6 2715 aaPredicted RBP1.89□□□□□ -2.11
VPS41-206ENST00000418457 IGLV8-61A0A075B6I0 122 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 TRBV19A0A075B6N1 114 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 LINC01549A6NIU2 74 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 KRTAP9-6A8MVA2 160 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 K7EMI3 77 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 IGKCP01834 107 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 IGKV1-16P04430 117 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 ARMS2P0C7Q2 107 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 ORM2P19652 201 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 FCER1GP30273 86 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 RPL27AP46776 148 aaKnown RBP1.89□□□□□ -2.11
VPS41-206ENST00000418457 UQCRFS1P47985 274 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 RIPPLY3P57055 190 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 TCTAP57738 103 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 CACNG7P62955 275 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 TNFAIP6P98066 277 aaPredicted RBP1.89□□□□□ -2.11
VPS41-206ENST00000418457 WT1-ASQ06250 92 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 KLF17Q5JT82 389 aaPredicted RBP1.89□□□□□ -2.11
VPS41-206ENST00000418457 FAM104BQ5XKR9 115 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 LINC00173Q6ZV60 143 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 PRNTQ86SH4 94 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 MOB3BQ86TA1 216 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 UBALD2Q8IYN6 164 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 OR10W1Q8NGF6 305 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 OR8A1Q8NGG7 326 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 SRSF12Q8WXF0 261 aaKnown RBP1.89□□□□□ -2.11
VPS41-206ENST00000418457 MRAP2Q96G30 205 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 GAFA1Q96PS6 74 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 RASL11BQ9BPW5 248 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 SHANK2-AS3Q9BTD1 123 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 CHAC1Q9BUX1 264 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 MRPL20Q9BYC9 149 aaKnown RBP1.89□□□□□ -2.11
VPS41-206ENST00000418457 HES7Q9BYE0 225 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 RAB1BQ9H0U4 201 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 SPRR3Q9UBC9 169 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 PSG8Q9UQ74 426 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 ZNF256Q9Y2P7 627 aaPredicted RBP1.89□□□□□ -2.11
VPS41-206ENST00000418457 SLC25A15Q9Y619 301 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 F11RQ9Y624 299 aaKnown RBP1.89□□□□□ -2.11
VPS41-206ENST00000418457 CACNA1GO43497 2377 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 SDK2Q58EX2 2172 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 MUC6Q6W4X9 2439 aa1.89□□□□□ -2.11
VPS41-206ENST00000418457 SMG1Q96Q15 3661 aaKnown RBP1.89□□□□□ -2.11
VPS41-206ENST00000418457 IGHV3OR15-7A0A075B7D8 119 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 A0A096LNJ9 63 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 TRAV12-1A0A0B4J245 112 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 TRAV17A0A0B4J275 112 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 PPIAL4CA0A0B4J2A2 164 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 IGHV3-64DA0A0J9YX35 117 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 A0A1B0GWB2 263 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 A0A1W2PRD5 423 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 A0A1W2PRF3 423 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 A0A1W2PRM7 423 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 RBAKDNA6NC62 111 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 NCBP2LA6PVI3 153 aaKnown RBP1.88□□□□□ -2.11
VPS41-206ENST00000418457 IGLL5B9A064 214 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 D6R8Y8 96 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 E9PLD3 99 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 TMEM262E9PQX1 116 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 H3BMG7 143 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 H3BRN7 92 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 NDUFB3O43676 98 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 DPM2O94777 84 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 NCR2O95944 276 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 IGLV2-23P01705 113 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 RBP4P02753 201 aa1.88□□□□□ -2.11
VPS41-206ENST00000418457 PPIAL4GP0DN37 164 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms