RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 MRPL35Q9NZE8 188 aaKnown RBP11.03□□□□□ -0.64
HDAC9-208ENST00000417496 KLK9Q9UKQ9 250 aa11.03□□□□□ -0.64
HDAC9-208ENST00000417496 H3BRM9 83 aa11.02□□□□□ -0.64
HDAC9-208ENST00000417496 CSPG4Q6UVK1 2322 aa11.02□□□□□ -0.65
HDAC9-208ENST00000417496 UTP20O75691 2785 aaKnown RBP11.02□□□□□ -0.65
HDAC9-208ENST00000417496 FXYD2P54710 66 aa11.02□□□□□ -0.65
HDAC9-208ENST00000417496 SMIM15Q7Z3B0 74 aa11.02□□□□□ -0.65
HDAC9-208ENST00000417496 OR4X2Q8NGF9 303 aa11.02□□□□□ -0.65
HDAC9-208ENST00000417496 FLNCQ14315 2725 aa11.01□□□□□ -0.65
HDAC9-208ENST00000417496 SAP30O75446 220 aa11.01□□□□□ -0.65
HDAC9-208ENST00000417496 IGHV4-39P01824 125 aa11.01□□□□□ -0.65
HDAC9-208ENST00000417496 LAGE3Q14657 143 aa11.01□□□□□ -0.65
HDAC9-208ENST00000417496 Q6ZS46 218 aa11.01□□□□□ -0.65
HDAC9-208ENST00000417496 DEFB104AQ8WTQ1 72 aa11.01□□□□□ -0.65
HDAC9-208ENST00000417496 NPFFR1Q9GZQ6 430 aa11.01□□□□□ -0.65
HDAC9-208ENST00000417496 CFAP46Q8IYW2 2715 aa11.01□□□□□ -0.65
HDAC9-208ENST00000417496 K7ERJ3 54 aa11.01□□□□□ -0.65
HDAC9-208ENST00000417496 SIVA1O15304 175 aa11.01□□□□□ -0.65
HDAC9-208ENST00000417496 VPS25Q9BRG1 176 aa11.01□□□□□ -0.65
HDAC9-208ENST00000417496 COL25A1Q9BXS0 654 aaPredicted RBP11.01□□□□□ -0.65
HDAC9-208ENST00000417496 MOB4Q9Y3A3 225 aa11.01□□□□□ -0.65
HDAC9-208ENST00000417496 SRD5A1P18405 259 aa11□□□□□ -0.65
HDAC9-208ENST00000417496 UFSP1Q6NVU6 142 aa11□□□□□ -0.65
HDAC9-208ENST00000417496 ITLN2Q8WWU7 325 aaPredicted RBP11□□□□□ -0.65
HDAC9-208ENST00000417496 DPM2O94777 84 aa11□□□□□ -0.65
HDAC9-208ENST00000417496 IGHV4-38-2P0DP08 117 aa11□□□□□ -0.65
HDAC9-208ENST00000417496 MAPKAPK5-AS1Q8N8E1 139 aa11□□□□□ -0.65
HDAC9-208ENST00000417496 TRBV25-1A0A075B6N4 114 aa10.99□□□□□ -0.65
HDAC9-208ENST00000417496 IGHV4-61A0A0C4DH41 118 aa10.99□□□□□ -0.65
HDAC9-208ENST00000417496 BLCAPP62952 87 aa10.99□□□□□ -0.65
HDAC9-208ENST00000417496 C19orf54Q5BKX5 351 aa10.99□□□□□ -0.65
HDAC9-208ENST00000417496 ZFAND2AQ8N6M9 145 aa10.99□□□□□ -0.65
HDAC9-208ENST00000417496 C14orf178Q8N769 122 aaPredicted RBP10.99□□□□□ -0.65
HDAC9-208ENST00000417496 MYOZ3Q8TDC0 251 aa10.99□□□□□ -0.65
HDAC9-208ENST00000417496 EDN2P20800 178 aa10.99□□□□□ -0.65
HDAC9-208ENST00000417496 WFDC12Q8WWY7 111 aa10.99□□□□□ -0.65
HDAC9-208ENST00000417496 RPL39LQ96EH5 51 aaKnown RBP10.99□□□□□ -0.65
HDAC9-208ENST00000417496 CHAC1Q9BUX1 264 aa10.99□□□□□ -0.65
HDAC9-208ENST00000417496 IGHV1-69DA0A0B4J2H0 117 aa10.98□□□□□ -0.65
HDAC9-208ENST00000417496 GNRH2O43555 120 aa10.98□□□□□ -0.65
HDAC9-208ENST00000417496 IGHV1-69P01742 117 aa10.98□□□□□ -0.65
HDAC9-208ENST00000417496 GNLYP22749 145 aa10.98□□□□□ -0.65
HDAC9-208ENST00000417496 MRPL53Q96EL3 112 aaKnown RBP10.98□□□□□ -0.65
HDAC9-208ENST00000417496 HIF1ANQ9NWT6 349 aa10.98□□□□□ -0.65
HDAC9-208ENST00000417496 S100A4P26447 101 aaKnown RBP10.98□□□□□ -0.65
HDAC9-208ENST00000417496 RNASE4P34096 147 aaKnown RBP10.98□□□□□ -0.65
HDAC9-208ENST00000417496 SRSF1Q07955 248 aaKnown RBP eCLIP10.97□□□□□ -0.65
HDAC9-208ENST00000417496 IGHV4-4A0A075B6R2 117 aa10.97□□□□□ -0.65
HDAC9-208ENST00000417496 FAM223BA6NKX1 122 aa10.97□□□□□ -0.65
HDAC9-208ENST00000417496 ATP5LO75964 103 aa10.97□□□□□ -0.65
HDAC9-208ENST00000417496 ANXA2RQ3ZCQ2 193 aa10.97□□□□□ -0.65
HDAC9-208ENST00000417496 C9orf139Q6ZV77 190 aa10.97□□□□□ -0.65
HDAC9-208ENST00000417496 GTF2H5Q6ZYL4 71 aa10.97□□□□□ -0.65
HDAC9-208ENST00000417496 FAM223AQ8IWN6 122 aa10.97□□□□□ -0.65
HDAC9-208ENST00000417496 PKD1L2Q7Z442 2459 aa10.96□□□□□ -0.65
HDAC9-208ENST00000417496 A0A1W2PPM0 123 aa10.96□□□□□ -0.65
HDAC9-208ENST00000417496 H3BUX3 64 aa10.96□□□□□ -0.65
HDAC9-208ENST00000417496 K7EP34 96 aa10.96□□□□□ -0.65
HDAC9-208ENST00000417496 PF4V1P10720 104 aa10.96□□□□□ -0.65
HDAC9-208ENST00000417496 OR10J6PQ8NGY7 276 aa10.96□□□□□ -0.65
HDAC9-208ENST00000417496 RASL10AQ92737 203 aa10.96□□□□□ -0.65
HDAC9-208ENST00000417496 SPOCK3Q9BQ16 436 aa10.96□□□□□ -0.65
HDAC9-208ENST00000417496 SPCS1Q9Y6A9 102 aa10.96□□□□□ -0.66
HDAC9-208ENST00000417496 SOCS3O14543 225 aa10.95□□□□□ -0.66
HDAC9-208ENST00000417496 MGPP08493 103 aa10.95□□□□□ -0.66
HDAC9-208ENST00000417496 SMIM13P0DJ93 91 aa10.95□□□□□ -0.66
HDAC9-208ENST00000417496 NEGR1Q7Z3B1 354 aa10.95□□□□□ -0.66
HDAC9-208ENST00000417496 SMIM2Q9BVW6 85 aa10.95□□□□□ -0.66
HDAC9-208ENST00000417496 NHP2Q9NX24 153 aaKnown RBP10.95□□□□□ -0.66
HDAC9-208ENST00000417496 PHLDA3Q9Y5J5 127 aa10.95□□□□□ -0.66
HDAC9-208ENST00000417496 USP9YO00507 2555 aaPredicted RBP10.95□□□□□ -0.66
HDAC9-208ENST00000417496 CENPEQ02224 2701 aa10.95□□□□□ -0.66
HDAC9-208ENST00000417496 ZANQ9Y493 2812 aa10.95□□□□□ -0.66
HDAC9-208ENST00000417496 CUBNO60494 3623 aa10.95□□□□□ -0.66
HDAC9-208ENST00000417496 A0A087WX48 190 aa10.95□□□□□ -0.66
HDAC9-208ENST00000417496 SAMD5Q5TGI4 173 aa10.95□□□□□ -0.66
HDAC9-208ENST00000417496 LINC00477Q96M19 166 aa10.95□□□□□ -0.66
HDAC9-208ENST00000417496 PRSS47A8MTI9 375 aa10.94□□□□□ -0.66
HDAC9-208ENST00000417496 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.94□□□□□ -0.66
HDAC9-208ENST00000417496 MEGF9Q9H1U4 602 aa10.94□□□□□ -0.66
HDAC9-208ENST00000417496 SMPXQ9UHP9 88 aa10.94□□□□□ -0.66
HDAC9-208ENST00000417496 AGRNO00468 2067 aa10.94□□□□□ -0.66
HDAC9-208ENST00000417496 DOPEY2Q9Y3R5 2298 aa10.94□□□□□ -0.66
HDAC9-208ENST00000417496 TRAV21A0A0B4J279 112 aa10.94□□□□□ -0.66
HDAC9-208ENST00000417496 SUMO2P61956 95 aaKnown RBP10.94□□□□□ -0.66
HDAC9-208ENST00000417496 CREBBPQ92793 2442 aa10.94□□□□□ -0.66
HDAC9-208ENST00000417496 USP9XQ93008 2570 aaPredicted RBP10.93□□□□□ -0.66
HDAC9-208ENST00000417496 NDUFA4O00483 81 aa10.93□□□□□ -0.66
HDAC9-208ENST00000417496 RHPN1-AS1Q9BWJ2 59 aa10.93□□□□□ -0.66
HDAC9-208ENST00000417496 ASIPP42127 132 aa10.93□□□□□ -0.66
HDAC9-208ENST00000417496 TMEM95Q3KNT9 176 aa10.93□□□□□ -0.66
HDAC9-208ENST00000417496 MRAP2Q96G30 205 aa10.93□□□□□ -0.66
HDAC9-208ENST00000417496 SCGB3A1Q96QR1 104 aa10.93□□□□□ -0.66
HDAC9-208ENST00000417496 HIGD1BQ9P298 99 aa10.93□□□□□ -0.66
HDAC9-208ENST00000417496 SORL1Q92673 2214 aa10.93□□□□□ -0.66
HDAC9-208ENST00000417496 POLQO75417 2590 aa10.92□□□□□ -0.66
HDAC9-208ENST00000417496 K7ERU9 68 aa10.92□□□□□ -0.66
HDAC9-208ENST00000417496 JPT2Q9H910 190 aa10.92□□□□□ -0.66
HDAC9-208ENST00000417496 FABP2P12104 132 aa10.92□□□□□ -0.66
HDAC9-208ENST00000417496 RNASE3P12724 160 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 197.8 ms