RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 M0R2P5 195 aa12.22□□□□□ -0.45
CPNE1-210ENST00000416778 NXPH4O95158 308 aa12.22□□□□□ -0.45
CPNE1-210ENST00000416778 TCRAP04437 139 aa12.22□□□□□ -0.45
CPNE1-210ENST00000416778 SUMO1P63165 101 aaKnown RBP12.22□□□□□ -0.45
CPNE1-210ENST00000416778 NEGR1Q7Z3B1 354 aa12.22□□□□□ -0.45
CPNE1-210ENST00000416778 HSPG2P98160 4391 aa12.21□□□□□ -0.45
CPNE1-210ENST00000416778 SERTM2A0A1B0GWG4 89 aa12.21□□□□□ -0.45
CPNE1-210ENST00000416778 RNF222A6NCQ9 220 aa12.21□□□□□ -0.45
CPNE1-210ENST00000416778 K7EQD1 137 aa12.21□□□□□ -0.45
CPNE1-210ENST00000416778 IGLV2-11P01706 119 aa12.21□□□□□ -0.45
CPNE1-210ENST00000416778 TYMSP04818 313 aa12.21□□□□□ -0.45
CPNE1-210ENST00000416778 ZNF80P51504 273 aaPredicted RBP12.21□□□□□ -0.45
CPNE1-210ENST00000416778 RPL7L1Q6DKI1 246 aaKnown RBP12.21□□□□□ -0.45
CPNE1-210ENST00000416778 C5orf17Q8NAS9 161 aa12.21□□□□□ -0.45
CPNE1-210ENST00000416778 INO80EQ8NBZ0 244 aaPredicted RBP12.21□□□□□ -0.45
CPNE1-210ENST00000416778 KCNS1Q96KK3 526 aa12.21□□□□□ -0.45
CPNE1-210ENST00000416778 ACTR3CQ9C0K3 210 aaPredicted RBP12.21□□□□□ -0.45
CPNE1-210ENST00000416778 C11orf21Q9P2W6 132 aa12.21□□□□□ -0.45
CPNE1-210ENST00000416778 EPDR1Q9UM22 224 aa12.21□□□□□ -0.45
CPNE1-210ENST00000416778 PSG8Q9UQ74 426 aa12.21□□□□□ -0.45
CPNE1-210ENST00000416778 TRAV4A0A0B4J268 109 aa12.2□□□□□ -0.46
CPNE1-210ENST00000416778 CXorf1O96002 111 aa12.2□□□□□ -0.46
CPNE1-210ENST00000416778 Q6ZRN7 208 aaPredicted RBP12.2□□□□□ -0.46
CPNE1-210ENST00000416778 SPATA12Q7Z6I5 190 aa12.2□□□□□ -0.46
CPNE1-210ENST00000416778 OR4C5Q8NGB2 326 aa12.2□□□□□ -0.46
CPNE1-210ENST00000416778 SDF2L1Q9HCN8 221 aa12.2□□□□□ -0.46
CPNE1-210ENST00000416778 TMEM167BQ9NRX6 74 aa12.2□□□□□ -0.46
CPNE1-210ENST00000416778 GYPEP15421 78 aa12.19□□□□□ -0.46
CPNE1-210ENST00000416778 LINC00315P59091 139 aa12.19□□□□□ -0.46
CPNE1-210ENST00000416778 GGTLC3B5MD39 225 aa12.18□□□□□ -0.46
CPNE1-210ENST00000416778 TAAR5O14804 337 aa12.18□□□□□ -0.46
CPNE1-210ENST00000416778 ORM1P02763 201 aa12.18□□□□□ -0.46
CPNE1-210ENST00000416778 ZNF726P1Q15940 193 aa12.18□□□□□ -0.46
CPNE1-210ENST00000416778 NDFIP1Q9BT67 221 aa12.18□□□□□ -0.46
CPNE1-210ENST00000416778 KRTAP4-5Q9BYR2 181 aa12.18□□□□□ -0.46
CPNE1-210ENST00000416778 TNFRSF18Q9Y5U5 241 aa12.18□□□□□ -0.46
CPNE1-210ENST00000416778 FXYD6-FXYD2A0A087WZ82 144 aa12.17□□□□□ -0.46
CPNE1-210ENST00000416778 BORCS7-ASMTA0A0B4J1R7 106 aa12.17□□□□□ -0.46
CPNE1-210ENST00000416778 A0A1W2PRE2 83 aa12.17□□□□□ -0.46
CPNE1-210ENST00000416778 G3V3Q6 166 aa12.17□□□□□ -0.46
CPNE1-210ENST00000416778 K7EQM0 130 aa12.17□□□□□ -0.46
CPNE1-210ENST00000416778 SRIP30626 198 aa12.17□□□□□ -0.46
CPNE1-210ENST00000416778 KRTAP10-2P60368 255 aa12.17□□□□□ -0.46
CPNE1-210ENST00000416778 FLI1Q01543 452 aaPredicted RBP12.17□□□□□ -0.46
CPNE1-210ENST00000416778 OR2T35Q8NGX2 323 aa12.17□□□□□ -0.46
CPNE1-210ENST00000416778 LINC00479Q96M42 142 aa12.17□□□□□ -0.46
CPNE1-210ENST00000416778 DNAH5Q8TE73 4624 aa12.16□□□□□ -0.46
CPNE1-210ENST00000416778 CDK2AP2O75956 126 aa12.16□□□□□ -0.46
CPNE1-210ENST00000416778 GCGP01275 180 aa12.16□□□□□ -0.46
CPNE1-210ENST00000416778 PRNTQ86SH4 94 aa12.16□□□□□ -0.46
CPNE1-210ENST00000416778 PFN1P07737 140 aaKnown RBP12.15□□□□□ -0.46
CPNE1-210ENST00000416778 GATA1P15976 413 aaPredicted RBP12.15□□□□□ -0.46
CPNE1-210ENST00000416778 ZNF876PQ49A33 203 aa12.15□□□□□ -0.46
CPNE1-210ENST00000416778 SMUG1Q53HV7 270 aa12.15□□□□□ -0.46
CPNE1-210ENST00000416778 SAPCD1Q5SSQ6 148 aa12.15□□□□□ -0.46
CPNE1-210ENST00000416778 CYB561D1Q8N8Q1 229 aa12.15□□□□□ -0.46
CPNE1-210ENST00000416778 TMEM75Q8N9X5 138 aa12.15□□□□□ -0.46
CPNE1-210ENST00000416778 TRAV9-2A0A087WT02 112 aa12.14□□□□□ -0.47
CPNE1-210ENST00000416778 LOC100131303A0A0U1RQF7 123 aa12.14□□□□□ -0.47
CPNE1-210ENST00000416778 FBLL1A6NHQ2 334 aaKnown RBP12.14□□□□□ -0.47
CPNE1-210ENST00000416778 C9JCJ5 164 aa12.14□□□□□ -0.47
CPNE1-210ENST00000416778 RS1O15537 224 aa12.14□□□□□ -0.47
CPNE1-210ENST00000416778 DPPA3Q6W0C5 159 aa12.14□□□□□ -0.47
CPNE1-210ENST00000416778 PCNPQ8WW12 178 aaKnown RBP12.14□□□□□ -0.47
CPNE1-210ENST00000416778 PTH2Q96A98 100 aa12.14□□□□□ -0.47
CPNE1-210ENST00000416778 C9orf85Q96MD7 179 aa12.14□□□□□ -0.47
CPNE1-210ENST00000416778 TXNDC17Q9BRA2 123 aa12.14□□□□□ -0.47
CPNE1-210ENST00000416778 CYTL1Q9NRR1 136 aa12.14□□□□□ -0.47
CPNE1-210ENST00000416778 TRAV34A0A0B4J273 112 aa12.13□□□□□ -0.47
CPNE1-210ENST00000416778 CTXND1A0A1B0GTU2 59 aa12.13□□□□□ -0.47
CPNE1-210ENST00000416778 RGS21Q2M5E4 152 aa12.13□□□□□ -0.47
CPNE1-210ENST00000416778 CFAP126Q5VTH2 177 aa12.13□□□□□ -0.47
CPNE1-210ENST00000416778 WFDC10BQ8IUB3 73 aa12.13□□□□□ -0.47
CPNE1-210ENST00000416778 LY96Q9Y6Y9 160 aa12.13□□□□□ -0.47
CPNE1-210ENST00000416778 APOBP04114 4563 aaKnown RBP12.13□□□□□ -0.47
CPNE1-210ENST00000416778 PGPEP1LA6NFU8 196 aa12.12□□□□□ -0.47
CPNE1-210ENST00000416778 K7EP13 123 aa12.12□□□□□ -0.47
CPNE1-210ENST00000416778 CIDEAO60543 219 aa12.12□□□□□ -0.47
CPNE1-210ENST00000416778 RNASE3P12724 160 aaKnown RBP12.12□□□□□ -0.47
CPNE1-210ENST00000416778 ABCA13Q86UQ4 5058 aa12.12□□□□□ -0.47
CPNE1-210ENST00000416778 IGKV3D-20A0A0C4DH25 116 aa12.11□□□□□ -0.47
CPNE1-210ENST00000416778 DNAH10OSP0CZ25 163 aa12.11□□□□□ -0.47
CPNE1-210ENST00000416778 TIRAPP58753 221 aa12.11□□□□□ -0.47
CPNE1-210ENST00000416778 SH2D6Q7Z4S9 175 aa12.11□□□□□ -0.47
CPNE1-210ENST00000416778 SLC25A29Q8N8R3 303 aa12.11□□□□□ -0.47
CPNE1-210ENST00000416778 FAM74A7A6NL05 159 aa12.1□□□□□ -0.47
CPNE1-210ENST00000416778 FABP5P3A8MUU1 101 aa12.1□□□□□ -0.47
CPNE1-210ENST00000416778 IFNA7P01567 189 aa12.1□□□□□ -0.47
CPNE1-210ENST00000416778 FGF8P55075 233 aaPredicted RBP12.1□□□□□ -0.47
CPNE1-210ENST00000416778 UBE2G2P60604 165 aa12.1□□□□□ -0.47
CPNE1-210ENST00000416778 ZFP69Q49AA0 526 aa12.1□□□□□ -0.47
CPNE1-210ENST00000416778 AKR1C8PQ5T2L2 129 aa12.1□□□□□ -0.47
CPNE1-210ENST00000416778 NFE4Q86UQ8 179 aa12.1□□□□□ -0.47
CPNE1-210ENST00000416778 NKX6-2Q9C056 277 aaPredicted RBP12.1□□□□□ -0.47
CPNE1-210ENST00000416778 PGPEP1Q9NXJ5 209 aa12.1□□□□□ -0.47
CPNE1-210ENST00000416778 TRBV6-4A0A1B0GX49 114 aa12.09□□□□□ -0.47
CPNE1-210ENST00000416778 ARPC5O15511 151 aa12.09□□□□□ -0.47
CPNE1-210ENST00000416778 EVI2AP22794 236 aa12.09□□□□□ -0.47
CPNE1-210ENST00000416778 CRIP1P50238 77 aa12.09□□□□□ -0.47
CPNE1-210ENST00000416778 ZNF506Q5JVG8 444 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms