RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 FLI1Q01543 452 aaPredicted RBP9.05□□□□□ -0.96
LINC00339-202ENST00000416769 RNF212Q495C1 297 aa9.05□□□□□ -0.96
LINC00339-202ENST00000416769 FMC1Q96HJ9 113 aa9.05□□□□□ -0.96
LINC00339-202ENST00000416769 FAM19A4Q96LR4 140 aa9.05□□□□□ -0.96
LINC00339-202ENST00000416769 LINC00479Q96M42 142 aa9.05□□□□□ -0.96
LINC00339-202ENST00000416769 TRAV8-1A0A0A6YYK1 113 aa9.04□□□□□ -0.96
LINC00339-202ENST00000416769 TRAV34A0A0B4J273 112 aa9.04□□□□□ -0.96
LINC00339-202ENST00000416769 TSPOP30536 169 aa9.04□□□□□ -0.96
LINC00339-202ENST00000416769 DAD1P61803 113 aa9.04□□□□□ -0.96
LINC00339-202ENST00000416769 UBE2G1P62253 170 aa9.04□□□□□ -0.96
LINC00339-202ENST00000416769 SOHLH1Q5JUK2 328 aa9.04□□□□□ -0.96
LINC00339-202ENST00000416769 SAPCD1Q5SSQ6 148 aa9.04□□□□□ -0.96
LINC00339-202ENST00000416769 ZNRF2Q8NHG8 242 aa9.04□□□□□ -0.96
LINC00339-202ENST00000416769 FAM210BQ96KR6 192 aa9.04□□□□□ -0.96
LINC00339-202ENST00000416769 SGK494Q96LW2 274 aa9.04□□□□□ -0.96
LINC00339-202ENST00000416769 ZFP30Q9Y2G7 519 aa9.04□□□□□ -0.96
LINC00339-202ENST00000416769 NBDYA0A0U1RRE5 68 aa9.03□□□□□ -0.96
LINC00339-202ENST00000416769 M0R2Z0 102 aa9.03□□□□□ -0.96
LINC00339-202ENST00000416769 CDK2AP2O75956 126 aa9.03□□□□□ -0.96
LINC00339-202ENST00000416769 CRISP2P16562 243 aa9.03□□□□□ -0.96
LINC00339-202ENST00000416769 LEPP41159 167 aa9.03□□□□□ -0.96
LINC00339-202ENST00000416769 CDKN1BP46527 198 aa9.03□□□□□ -0.96
LINC00339-202ENST00000416769 SRSF3P84103 164 aaKnown RBP9.03□□□□□ -0.96
LINC00339-202ENST00000416769 PRNTQ86SH4 94 aa9.03□□□□□ -0.96
LINC00339-202ENST00000416769 KRTAP1-5Q9BYS1 174 aa9.03□□□□□ -0.96
LINC00339-202ENST00000416769 GOLT1BQ9Y3E0 138 aa9.03□□□□□ -0.96
LINC00339-202ENST00000416769 PLAC8L1A1L4L8 177 aa9.02□□□□□ -0.97
LINC00339-202ENST00000416769 CRXO43186 299 aaPredicted RBP9.02□□□□□ -0.97
LINC00339-202ENST00000416769 DEFB130BP0DP73 79 aa9.02□□□□□ -0.97
LINC00339-202ENST00000416769 DEFB130AP0DP74 79 aa9.02□□□□□ -0.97
LINC00339-202ENST00000416769 AZU1P20160 251 aa9.02□□□□□ -0.97
LINC00339-202ENST00000416769 RPL35P42766 123 aaKnown RBP9.02□□□□□ -0.97
LINC00339-202ENST00000416769 RRN3P1Q2M238 152 aa9.02□□□□□ -0.97
LINC00339-202ENST00000416769 UQCC3Q6UW78 93 aa9.02□□□□□ -0.97
LINC00339-202ENST00000416769 EIF4E3Q8N5X7 224 aaKnown RBP9.02□□□□□ -0.97
LINC00339-202ENST00000416769 TVP23CQ96ET8 276 aa9.02□□□□□ -0.97
LINC00339-202ENST00000416769 NDFIP1Q9BT67 221 aa9.02□□□□□ -0.97
LINC00339-202ENST00000416769 TMA7Q9Y2S6 64 aaKnown RBP9.02□□□□□ -0.97
LINC00339-202ENST00000416769 KLLNB2CW77 178 aa9.01□□□□□ -0.97
LINC00339-202ENST00000416769 C9JQL5 133 aa9.01□□□□□ -0.97
LINC00339-202ENST00000416769 NUDT3O95989 172 aa9.01□□□□□ -0.97
LINC00339-202ENST00000416769 LTAP01374 205 aa9.01□□□□□ -0.97
LINC00339-202ENST00000416769 GPX1P07203 203 aa9.01□□□□□ -0.97
LINC00339-202ENST00000416769 KRTAP10-2P60368 255 aa9.01□□□□□ -0.97
LINC00339-202ENST00000416769 SPINK13Q1W4C9 94 aa9.01□□□□□ -0.97
LINC00339-202ENST00000416769 COX8CQ7Z4L0 72 aa9.01□□□□□ -0.97
LINC00339-202ENST00000416769 BAGE2Q86Y30 109 aa9.01□□□□□ -0.97
LINC00339-202ENST00000416769 C6orf223Q8N319 242 aa9.01□□□□□ -0.97
LINC00339-202ENST00000416769 ZFAND2AQ8N6M9 145 aa9.01□□□□□ -0.97
LINC00339-202ENST00000416769 Q8TAT8 98 aa9.01□□□□□ -0.97
LINC00339-202ENST00000416769 TREM1Q9NP99 234 aa9.01□□□□□ -0.97
LINC00339-202ENST00000416769 LINC00588Q9Y4M8 146 aa9.01□□□□□ -0.97
LINC00339-202ENST00000416769 TRAV12-2A0A075B6T6 113 aa9□□□□□ -0.97
LINC00339-202ENST00000416769 FUSP35637 526 aaKnown RBP eCLIP9□□□□□ -0.97
LINC00339-202ENST00000416769 SPATA12Q7Z6I5 190 aa9□□□□□ -0.97
LINC00339-202ENST00000416769 Q86TA4 180 aa9□□□□□ -0.97
LINC00339-202ENST00000416769 COMMD7Q86VX2 200 aa9□□□□□ -0.97
LINC00339-202ENST00000416769 TMEM183AQ8IXX5 376 aa9□□□□□ -0.97
LINC00339-202ENST00000416769 Q8N1X5 172 aa9□□□□□ -0.97
LINC00339-202ENST00000416769 IGF2BP2-AS1Q96M15 143 aa9□□□□□ -0.97
LINC00339-202ENST00000416769 C20orf144Q9BQM9 153 aa9□□□□□ -0.97
LINC00339-202ENST00000416769 DERL1Q9BUN8 251 aa9□□□□□ -0.97
LINC00339-202ENST00000416769 PARLQ9H300 379 aa9□□□□□ -0.97
LINC00339-202ENST00000416769 FAT1Q14517 4588 aa8.99□□□□□ -0.97
LINC00339-202ENST00000416769 TEX48A0A1B0GUV7 120 aa8.99□□□□□ -0.97
LINC00339-202ENST00000416769 C9JCJ5 164 aa8.99□□□□□ -0.97
LINC00339-202ENST00000416769 F5H768 121 aa8.99□□□□□ -0.97
LINC00339-202ENST00000416769 FAM74A3Q4VXF1 159 aa8.99□□□□□ -0.97
LINC00339-202ENST00000416769 SMUG1Q53HV7 270 aa8.99□□□□□ -0.97
LINC00339-202ENST00000416769 SMIM12Q96EX1 92 aa8.99□□□□□ -0.97
LINC00339-202ENST00000416769 C8orf49Q96NF6 230 aa8.99□□□□□ -0.97
LINC00339-202ENST00000416769 TMEM208Q9BTX3 173 aa8.99□□□□□ -0.97
LINC00339-202ENST00000416769 MLST8Q9BVC4 326 aa8.99□□□□□ -0.97
LINC00339-202ENST00000416769 SCRT2Q9NQ03 307 aa8.99□□□□□ -0.97
LINC00339-202ENST00000416769 C7orf71A4D174 169 aa8.98□□□□□ -0.97
LINC00339-202ENST00000416769 ZNF324O75467 553 aaPredicted RBP8.98□□□□□ -0.97
LINC00339-202ENST00000416769 IGLV2-8P01709 118 aa8.98□□□□□ -0.97
LINC00339-202ENST00000416769 RNASE4P34096 147 aaKnown RBP8.98□□□□□ -0.97
LINC00339-202ENST00000416769 GNG4P50150 75 aa8.98□□□□□ -0.97
LINC00339-202ENST00000416769 CEBPGP53567 150 aa8.98□□□□□ -0.97
LINC00339-202ENST00000416769 KIR3DS1Q14943 382 aa8.98□□□□□ -0.97
LINC00339-202ENST00000416769 ZNF674Q2M3X9 581 aa8.98□□□□□ -0.97
LINC00339-202ENST00000416769 LINC01559Q495D7 138 aa8.98□□□□□ -0.97
LINC00339-202ENST00000416769 GFI1BQ5VTD9 330 aa8.98□□□□□ -0.97
LINC00339-202ENST00000416769 Q6AWC8 147 aa8.98□□□□□ -0.97
LINC00339-202ENST00000416769 C15orf53Q8NAA6 179 aa8.98□□□□□ -0.97
LINC00339-202ENST00000416769 LY96Q9Y6Y9 160 aa8.98□□□□□ -0.97
LINC00339-202ENST00000416769 ZNF727A8MUV8 499 aa8.97□□□□□ -0.97
LINC00339-202ENST00000416769 J3KRW8 73 aa8.97□□□□□ -0.97
LINC00339-202ENST00000416769 GCGP01275 180 aa8.97□□□□□ -0.97
LINC00339-202ENST00000416769 INSP01308 110 aa8.97□□□□□ -0.97
LINC00339-202ENST00000416769 CENPWQ5EE01 88 aa8.97□□□□□ -0.97
LINC00339-202ENST00000416769 PRR9Q5T870 116 aa8.97□□□□□ -0.97
LINC00339-202ENST00000416769 TMEM256Q8N2U0 113 aa8.97□□□□□ -0.97
LINC00339-202ENST00000416769 SMIM7Q9BQ49 75 aa8.97□□□□□ -0.97
LINC00339-202ENST00000416769 BIN3Q9NQY0 253 aa8.97□□□□□ -0.97
LINC00339-202ENST00000416769 TRBV20OR9-2A0A075B6H5 130 aa8.96□□□□□ -0.98
LINC00339-202ENST00000416769 TRAV12-3A0A0B4J271 114 aa8.96□□□□□ -0.98
LINC00339-202ENST00000416769 TRAV21A0A0B4J279 112 aa8.96□□□□□ -0.98
LINC00339-202ENST00000416769 FABP5P3A8MUU1 101 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms