RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 C2orf66Q6UXQ4 117 aa8.36□□□□□ -1.07
COL12A1-203ENST00000416123 DLX4Q92988 240 aaPredicted RBP8.36□□□□□ -1.07
COL12A1-203ENST00000416123 LGALS1P09382 135 aaKnown RBP8.36□□□□□ -1.07
COL12A1-203ENST00000416123 ATP6V0BQ99437 205 aa8.36□□□□□ -1.07
COL12A1-203ENST00000416123 ELANEP08246 267 aa8.35□□□□□ -1.07
COL12A1-203ENST00000416123 NCOR1P1Q9H4R4 102 aa8.35□□□□□ -1.07
COL12A1-203ENST00000416123 IGKV1OR2-108A0A075B7D4 117 aa8.35□□□□□ -1.07
COL12A1-203ENST00000416123 IGLC7A0M8Q6 106 aa8.35□□□□□ -1.07
COL12A1-203ENST00000416123 ZNF491Q8N8L2 437 aa8.35□□□□□ -1.07
COL12A1-203ENST00000416123 ESM1Q9NQ30 184 aa8.35□□□□□ -1.07
COL12A1-203ENST00000416123 XCL1P47992 114 aa8.35□□□□□ -1.07
COL12A1-203ENST00000416123 ZNF492Q9P255 531 aa8.35□□□□□ -1.07
COL12A1-203ENST00000416123 TET2Q6N021 2002 aaPredicted RBP8.35□□□□□ -1.07
COL12A1-203ENST00000416123 IGKV2D-24A0A075B6R9 120 aa8.34□□□□□ -1.07
COL12A1-203ENST00000416123 C18orf32Q8TCD1 76 aa8.34□□□□□ -1.07
COL12A1-203ENST00000416123 MRPL53Q96EL3 112 aaKnown RBP8.34□□□□□ -1.07
COL12A1-203ENST00000416123 TMEM14CQ9P0S9 112 aa8.34□□□□□ -1.07
COL12A1-203ENST00000416123 V9GYV3 84 aa8.34□□□□□ -1.07
COL12A1-203ENST00000416123 SMIM27A0A1W2PRY6 76 aa8.34□□□□□ -1.07
COL12A1-203ENST00000416123 WIPF3A6NGB9 483 aa8.34□□□□□ -1.07
COL12A1-203ENST00000416123 BDP1A6H8Y1 2624 aa8.34□□□□□ -1.07
COL12A1-203ENST00000416123 IGHV1-24A0A0C4DH33 117 aa8.34□□□□□ -1.07
COL12A1-203ENST00000416123 SEM1Q6ZVN7 128 aa8.34□□□□□ -1.07
COL12A1-203ENST00000416123 KLF12Q9Y4X4 402 aa8.34□□□□□ -1.07
COL12A1-203ENST00000416123 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.34□□□□□ -1.07
COL12A1-203ENST00000416123 IGKV2-29A2NJV5 120 aaPredicted RBP8.34□□□□□ -1.07
COL12A1-203ENST00000416123 Q8N8P6 123 aa8.34□□□□□ -1.07
COL12A1-203ENST00000416123 CFHR4Q92496 578 aa8.34□□□□□ -1.07
COL12A1-203ENST00000416123 OCIAD2Q56VL3 154 aa8.34□□□□□ -1.07
COL12A1-203ENST00000416123 GAGE2AQ6NT46 116 aa8.34□□□□□ -1.07
COL12A1-203ENST00000416123 OR11H6Q8NGC7 330 aa8.34□□□□□ -1.07
COL12A1-203ENST00000416123 C9JAW5 83 aa8.33□□□□□ -1.08
COL12A1-203ENST00000416123 EREGO14944 169 aa8.33□□□□□ -1.08
COL12A1-203ENST00000416123 SIGLEC8Q9NYZ4 499 aa8.33□□□□□ -1.08
COL12A1-203ENST00000416123 PRSS29PA6NIE9 313 aa8.33□□□□□ -1.08
COL12A1-203ENST00000416123 ZFP36P26651 326 aaKnown RBP8.33□□□□□ -1.08
COL12A1-203ENST00000416123 IGHV7-81A0A0B4J1V7 117 aa8.33□□□□□ -1.08
COL12A1-203ENST00000416123 PYY3Q5JQD4 70 aa8.33□□□□□ -1.08
COL12A1-203ENST00000416123 SUMO4Q6EEV6 95 aa8.33□□□□□ -1.08
COL12A1-203ENST00000416123 ADAMTS20P59510 1910 aa8.33□□□□□ -1.08
COL12A1-203ENST00000416123 WDR87Q6ZQQ6 2873 aa8.33□□□□□ -1.08
COL12A1-203ENST00000416123 GP9P14770 177 aa8.33□□□□□ -1.08
COL12A1-203ENST00000416123 C9orf66Q5T8R8 295 aa8.33□□□□□ -1.08
COL12A1-203ENST00000416123 TMEM141Q96I45 108 aa8.33□□□□□ -1.08
COL12A1-203ENST00000416123 SNHG12Q9BXW3 62 aa8.33□□□□□ -1.08
COL12A1-203ENST00000416123 TRAV25A0A0B4J276 109 aa8.32□□□□□ -1.08
COL12A1-203ENST00000416123 IGHV4OR15-8A0A075B7B6 117 aa8.32□□□□□ -1.08
COL12A1-203ENST00000416123 A0A087WW49 117 aa8.32□□□□□ -1.08
COL12A1-203ENST00000416123 EGR2P11161 476 aaPredicted RBP8.32□□□□□ -1.08
COL12A1-203ENST00000416123 FOXI2Q6ZQN5 318 aa8.32□□□□□ -1.08
COL12A1-203ENST00000416123 AJUBAQ96IF1 538 aa8.32□□□□□ -1.08
COL12A1-203ENST00000416123 ANAPC13Q9BS18 74 aa8.32□□□□□ -1.08
COL12A1-203ENST00000416123 CPAMD8Q8IZJ3 1885 aa8.32□□□□□ -1.08
COL12A1-203ENST00000416123 CREBBPQ92793 2442 aa8.32□□□□□ -1.08
COL12A1-203ENST00000416123 WIPF2Q8TF74 440 aaPredicted RBP8.32□□□□□ -1.08
COL12A1-203ENST00000416123 GAGE2EQ4V326 116 aa8.32□□□□□ -1.08
COL12A1-203ENST00000416123 ZNF664Q8N3J9 261 aa8.32□□□□□ -1.08
COL12A1-203ENST00000416123 GAGE2DQ9UEU5 116 aa8.32□□□□□ -1.08
COL12A1-203ENST00000416123 K7EN84 100 aa8.32□□□□□ -1.08
COL12A1-203ENST00000416123 DEFB4AO15263 64 aa8.31□□□□□ -1.08
COL12A1-203ENST00000416123 NPYP01303 97 aa8.31□□□□□ -1.08
COL12A1-203ENST00000416123 C5orf56Q8N8D9 126 aa8.31□□□□□ -1.08
COL12A1-203ENST00000416123 IGF2-ASQ6U949 168 aa8.31□□□□□ -1.08
COL12A1-203ENST00000416123 KLF2Q9Y5W3 355 aaPredicted RBP8.31□□□□□ -1.08
COL12A1-203ENST00000416123 COL5A1P20908 1838 aaPredicted RBP8.31□□□□□ -1.08
COL12A1-203ENST00000416123 C10orf105Q8TEF2 133 aa8.31□□□□□ -1.08
COL12A1-203ENST00000416123 SIGMAR1Q99720 223 aa8.31□□□□□ -1.08
COL12A1-203ENST00000416123 TMEM126AQ9H061 195 aa8.31□□□□□ -1.08
COL12A1-203ENST00000416123 ATG2AQ2TAZ0 1938 aa8.3□□□□□ -1.08
COL12A1-203ENST00000416123 DEFB105AQ8NG35 78 aa8.3□□□□□ -1.08
COL12A1-203ENST00000416123 PIFOQ8TCI5 191 aa8.3□□□□□ -1.08
COL12A1-203ENST00000416123 A8MWP6 167 aa8.3□□□□□ -1.08
COL12A1-203ENST00000416123 IGLV10-54A0A075B6I4 117 aa8.3□□□□□ -1.08
COL12A1-203ENST00000416123 EXPH5Q8NEV8 1989 aa8.3□□□□□ -1.08
COL12A1-203ENST00000416123 H3BUA1 57 aa8.3□□□□□ -1.08
COL12A1-203ENST00000416123 SCRT2Q9NQ03 307 aa8.29□□□□□ -1.08
COL12A1-203ENST00000416123 CT83Q5H943 113 aa8.29□□□□□ -1.08
COL12A1-203ENST00000416123 MORN5Q5VZ52 161 aa8.29□□□□□ -1.08
COL12A1-203ENST00000416123 Q8NA96 180 aa8.29□□□□□ -1.08
COL12A1-203ENST00000416123 POLR3KQ9Y2Y1 108 aaPredicted RBP8.29□□□□□ -1.08
COL12A1-203ENST00000416123 NPBQ8NG41 125 aa8.29□□□□□ -1.08
COL12A1-203ENST00000416123 RPL18AQ02543 176 aaKnown RBP8.29□□□□□ -1.08
COL12A1-203ENST00000416123 KLF5Q13887 457 aaPredicted RBP8.29□□□□□ -1.08
COL12A1-203ENST00000416123 HIST2H2BCQ6DN03 193 aa8.29□□□□□ -1.08
COL12A1-203ENST00000416123 Q8N9W7 124 aa8.29□□□□□ -1.08
COL12A1-203ENST00000416123 RPL39LQ96EH5 51 aaKnown RBP8.29□□□□□ -1.08
COL12A1-203ENST00000416123 MRPL35Q9NZE8 188 aaKnown RBP8.29□□□□□ -1.08
COL12A1-203ENST00000416123 LRP4O75096 1905 aa8.29□□□□□ -1.08
COL12A1-203ENST00000416123 IGHV4-4A0A075B6R2 117 aa8.29□□□□□ -1.08
COL12A1-203ENST00000416123 LTAP01374 205 aa8.29□□□□□ -1.08
COL12A1-203ENST00000416123 AGPAT4-IT1Q9H0P7 198 aa8.29□□□□□ -1.08
COL12A1-203ENST00000416123 IGHV3-30P01768 117 aa8.28□□□□□ -1.08
COL12A1-203ENST00000416123 IGHV3-33P01772 117 aa8.28□□□□□ -1.08
COL12A1-203ENST00000416123 IGHV3-30-3P0DP02 117 aa8.28□□□□□ -1.08
COL12A1-203ENST00000416123 IGHV3-30-5P0DP03 117 aa8.28□□□□□ -1.08
COL12A1-203ENST00000416123 GATA1P15976 413 aaPredicted RBP8.28□□□□□ -1.08
COL12A1-203ENST00000416123 Q0VG73 95 aa8.28□□□□□ -1.08
COL12A1-203ENST00000416123 KRTAP27-1Q3LI81 207 aa8.28□□□□□ -1.08
COL12A1-203ENST00000416123 GYPEP15421 78 aa8.28□□□□□ -1.08
COL12A1-203ENST00000416123 DEFB1P60022 68 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms