RNA–Protein interactions for RNA: ENST00000415220.6

PRKD1-202, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-202ENST00000415220 SOCS3O14543 225 aa11.11□□□□□ -0.63
PRKD1-202ENST00000415220 FAM223AQ8IWN6 122 aa11.11□□□□□ -0.63
PRKD1-202ENST00000415220 MRPL53Q96EL3 112 aaKnown RBP11.11□□□□□ -0.63
PRKD1-202ENST00000415220 ZMAT4Q9H898 229 aa11.11□□□□□ -0.63
PRKD1-202ENST00000415220 ZANQ9Y493 2812 aa11.11□□□□□ -0.63
PRKD1-202ENST00000415220 M0R381 172 aa11.1□□□□□ -0.63
PRKD1-202ENST00000415220 SMIM17P0DL12 118 aa11.1□□□□□ -0.63
PRKD1-202ENST00000415220 RPL11P62913 178 aaKnown RBP11.1□□□□□ -0.63
PRKD1-202ENST00000415220 NPFFR1Q9GZQ6 430 aa11.1□□□□□ -0.63
PRKD1-202ENST00000415220 IGHV4-30-2A0A087WSY4 118 aa11.1□□□□□ -0.63
PRKD1-202ENST00000415220 TMEM8BA6NDV4 472 aa11.1□□□□□ -0.63
PRKD1-202ENST00000415220 COTL1Q14019 142 aa11.1□□□□□ -0.63
PRKD1-202ENST00000415220 TMEM95Q3KNT9 176 aa11.1□□□□□ -0.63
PRKD1-202ENST00000415220 WFDC12Q8WWY7 111 aa11.1□□□□□ -0.63
PRKD1-202ENST00000415220 USP9XQ93008 2570 aaPredicted RBP11.09□□□□□ -0.63
PRKD1-202ENST00000415220 AVPP01185 164 aa11.09□□□□□ -0.63
PRKD1-202ENST00000415220 C9orf139Q6ZV77 190 aa11.09□□□□□ -0.63
PRKD1-202ENST00000415220 DEFB104AQ8WTQ1 72 aa11.09□□□□□ -0.63
PRKD1-202ENST00000415220 RPL39LQ96EH5 51 aaKnown RBP11.09□□□□□ -0.63
PRKD1-202ENST00000415220 MRPL35Q9NZE8 188 aaKnown RBP11.09□□□□□ -0.63
PRKD1-202ENST00000415220 GNRH2O43555 120 aa11.08□□□□□ -0.64
PRKD1-202ENST00000415220 PF4V1P10720 104 aa11.08□□□□□ -0.64
PRKD1-202ENST00000415220 CRIP2P52943 208 aaPredicted RBP11.08□□□□□ -0.64
PRKD1-202ENST00000415220 NRGNQ92686 78 aa11.08□□□□□ -0.64
PRKD1-202ENST00000415220 TMEM160Q9NX00 188 aa11.08□□□□□ -0.64
PRKD1-202ENST00000415220 H3BUT2 72 aa11.08□□□□□ -0.64
PRKD1-202ENST00000415220 IGKCP01834 107 aa11.08□□□□□ -0.64
PRKD1-202ENST00000415220 SEC11AP67812 179 aa11.08□□□□□ -0.64
PRKD1-202ENST00000415220 PEF1Q9UBV8 284 aaKnown RBP11.08□□□□□ -0.64
PRKD1-202ENST00000415220 RNASE4P34096 147 aaKnown RBP11.08□□□□□ -0.64
PRKD1-202ENST00000415220 ANXA2RQ3ZCQ2 193 aa11.08□□□□□ -0.64
PRKD1-202ENST00000415220 ZC2HC1BQ5TFG8 222 aa11.08□□□□□ -0.64
PRKD1-202ENST00000415220 CCL19Q99731 98 aa11.08□□□□□ -0.64
PRKD1-202ENST00000415220 MEGF9Q9H1U4 602 aa11.08□□□□□ -0.64
PRKD1-202ENST00000415220 HIF1ANQ9NWT6 349 aa11.08□□□□□ -0.64
PRKD1-202ENST00000415220 IGSF10Q6WRI0 2623 aa11.07□□□□□ -0.64
PRKD1-202ENST00000415220 IGHV4-4A0A075B6R2 117 aa11.07□□□□□ -0.64
PRKD1-202ENST00000415220 HSD52Q0P140 79 aa11.07□□□□□ -0.64
PRKD1-202ENST00000415220 LAGE3Q14657 143 aa11.07□□□□□ -0.64
PRKD1-202ENST00000415220 C14orf178Q8N769 122 aaPredicted RBP11.07□□□□□ -0.64
PRKD1-202ENST00000415220 OR4X2Q8NGF9 303 aa11.07□□□□□ -0.64
PRKD1-202ENST00000415220 OR9G4Q8NGQ1 327 aa11.07□□□□□ -0.64
PRKD1-202ENST00000415220 C10orf105Q8TEF2 133 aa11.07□□□□□ -0.64
PRKD1-202ENST00000415220 PIMREGQ9BSJ6 248 aa11.07□□□□□ -0.64
PRKD1-202ENST00000415220 CST9LQ9H4G1 147 aa11.07□□□□□ -0.64
PRKD1-202ENST00000415220 MUC4Q99102 2169 aa11.06□□□□□ -0.64
PRKD1-202ENST00000415220 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.06□□□□□ -0.64
PRKD1-202ENST00000415220 CSPG4Q6UVK1 2322 aa11.06□□□□□ -0.64
PRKD1-202ENST00000415220 NDUFA4O00483 81 aa11.06□□□□□ -0.64
PRKD1-202ENST00000415220 C10orf99Q6UWK7 81 aa11.06□□□□□ -0.64
PRKD1-202ENST00000415220 MAPKAPK5-AS1Q8N8E1 139 aa11.06□□□□□ -0.64
PRKD1-202ENST00000415220 FBN2P35556 2912 aa11.06□□□□□ -0.64
PRKD1-202ENST00000415220 A6NDX4 124 aa11.06□□□□□ -0.64
PRKD1-202ENST00000415220 IGHG2P01859 326 aa11.06□□□□□ -0.64
PRKD1-202ENST00000415220 FXYD2P54710 66 aa11.06□□□□□ -0.64
PRKD1-202ENST00000415220 SMIM15Q7Z3B0 74 aa11.06□□□□□ -0.64
PRKD1-202ENST00000415220 RASL10AQ92737 203 aa11.06□□□□□ -0.64
PRKD1-202ENST00000415220 RNF223E7ERA6 249 aa11.06□□□□□ -0.64
PRKD1-202ENST00000415220 K7ERJ3 54 aa11.06□□□□□ -0.64
PRKD1-202ENST00000415220 C9orf118A6NHY6 69 aa11.05□□□□□ -0.64
PRKD1-202ENST00000415220 OR10J6PQ8NGY7 276 aa11.05□□□□□ -0.64
PRKD1-202ENST00000415220 GAGE12BA1L429 117 aa11.05□□□□□ -0.64
PRKD1-202ENST00000415220 H3BRM9 83 aa11.05□□□□□ -0.64
PRKD1-202ENST00000415220 RHPN1-AS1Q9BWJ2 59 aa11.05□□□□□ -0.64
PRKD1-202ENST00000415220 PIEZO1Q92508 2521 aa11.05□□□□□ -0.64
PRKD1-202ENST00000415220 CUBNO60494 3623 aa11.04□□□□□ -0.64
PRKD1-202ENST00000415220 PRSS47A8MTI9 375 aa11.04□□□□□ -0.64
PRKD1-202ENST00000415220 SIVA1O15304 175 aa11.04□□□□□ -0.64
PRKD1-202ENST00000415220 DPM2O94777 84 aa11.04□□□□□ -0.64
PRKD1-202ENST00000415220 GCSHP23434 173 aa11.04□□□□□ -0.64
PRKD1-202ENST00000415220 NEGR1Q7Z3B1 354 aa11.04□□□□□ -0.64
PRKD1-202ENST00000415220 FAM19A4Q96LR4 140 aa11.04□□□□□ -0.64
PRKD1-202ENST00000415220 A0A0G2JLM5 398 aa11.04□□□□□ -0.64
PRKD1-202ENST00000415220 MGPP08493 103 aa11.04□□□□□ -0.64
PRKD1-202ENST00000415220 RNASE3P12724 160 aaKnown RBP11.04□□□□□ -0.64
PRKD1-202ENST00000415220 ATP5J2P56134 94 aa11.04□□□□□ -0.64
PRKD1-202ENST00000415220 UFSP1Q6NVU6 142 aa11.04□□□□□ -0.64
PRKD1-202ENST00000415220 LINC00477Q96M19 166 aa11.04□□□□□ -0.64
PRKD1-202ENST00000415220 SMIM2Q9BVW6 85 aa11.04□□□□□ -0.64
PRKD1-202ENST00000415220 TRBV25-1A0A075B6N4 114 aa11.03□□□□□ -0.64
PRKD1-202ENST00000415220 A6NDN8 102 aa11.03□□□□□ -0.64
PRKD1-202ENST00000415220 S100A4P26447 101 aaKnown RBP11.03□□□□□ -0.64
PRKD1-202ENST00000415220 CHAC1Q9BUX1 264 aa11.03□□□□□ -0.64
PRKD1-202ENST00000415220 JPT2Q9H910 190 aa11.03□□□□□ -0.64
PRKD1-202ENST00000415220 GAGE10A6NGK3 116 aa11.03□□□□□ -0.64
PRKD1-202ENST00000415220 MYOZ3Q8TDC0 251 aa11.03□□□□□ -0.64
PRKD1-202ENST00000415220 TRAV21A0A0B4J279 112 aa11.02□□□□□ -0.64
PRKD1-202ENST00000415220 SRSF1Q07955 248 aaKnown RBP eCLIP11.02□□□□□ -0.64
PRKD1-202ENST00000415220 OCIAD2Q56VL3 154 aa11.02□□□□□ -0.64
PRKD1-202ENST00000415220 CENPEQ02224 2701 aa11.02□□□□□ -0.65
PRKD1-202ENST00000415220 POLQO75417 2590 aa11.02□□□□□ -0.65
PRKD1-202ENST00000415220 OVOL1O14753 267 aa11.02□□□□□ -0.65
PRKD1-202ENST00000415220 ATP5LO75964 103 aa11.02□□□□□ -0.65
PRKD1-202ENST00000415220 PHLDA3Q9Y5J5 127 aa11.02□□□□□ -0.65
PRKD1-202ENST00000415220 ASIPP42127 132 aa11.02□□□□□ -0.65
PRKD1-202ENST00000415220 A0A087WX48 190 aa11.01□□□□□ -0.65
PRKD1-202ENST00000415220 SAP30O75446 220 aa11.01□□□□□ -0.65
PRKD1-202ENST00000415220 IGLV1-40P01703 118 aa11.01□□□□□ -0.65
PRKD1-202ENST00000415220 CDKN1BP46527 198 aa11.01□□□□□ -0.65
PRKD1-202ENST00000415220 ATP6V0BQ99437 205 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms