RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 RBM7Q9Y580 266 aaKnown RBP1.69□□□□□ -2.14
MCF2-204ENST00000414978 GPR98Q8WXG9 6306 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 PRR14LQ5THK1 2151 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 IGLV3-9A0A075B6K5 115 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 CRYM-AS1A6NIL9 109 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 M0R233 179 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 GPR31O00270 319 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 IGHV1-8P0DP01 117 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 S100A7P31151 101 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 GABRA2P47869 451 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 LINC00483Q53H64 154 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 Q5BKY6 102 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 ZNF660Q6AZW8 331 aaPredicted RBP1.68□□□□□ -2.14
MCF2-204ENST00000414978 SIGLECL1Q8N7X8 197 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 TM2D3Q9BRN9 247 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 C2orf88Q9BSF0 95 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 BPESC1Q9GZL8 116 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 NAA60Q9H7X0 242 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 DYNLRB1Q9NP97 96 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 ZNF586Q9NXT0 402 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 A0A096LNJ9 63 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 PIGBOS1A0A0B4J2F0 54 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 PGPA6NDG6 321 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 HMSDA8MTL9 139 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 H7BYZ3 331 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 SCO1O75880 301 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 IGHV1-46P01743 117 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 OR5G3P0C626 314 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 OR5AC1P0C628 307 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 SMIM17P0DL12 118 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 CGB3P0DN86 165 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 CGB7P0DN87 165 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 SUPT4H1P63272 117 aaKnown RBP1.68□□□□□ -2.14
MCF2-204ENST00000414978 LGALSLQ3ZCW2 172 aaPredicted RBP1.68□□□□□ -2.14
MCF2-204ENST00000414978 ZNF880Q6PDB4 577 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 BPIFA4PQ86YQ2 179 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 ZNF695Q8IW36 515 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 CLDND2Q8NHS1 167 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 PPP1R1CQ8WVI7 109 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 GALMQ96C23 342 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 C2orf50Q96LR7 162 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 SHANK2-AS3Q9BTD1 123 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 TTTY13Q9BZ97 58 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 TAF9BQ9HBM6 251 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 GSKIPQ9P0R6 139 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 PHLDA3Q9Y5J5 127 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 VWFP04275 2813 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 ZANQ9Y493 2812 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 IGHV3OR15-7A0A075B7D8 119 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 TRBV6-7A0A0A0MS04 114 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 C3orf85A0A1B0GTC6 90 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 G3V3Q6 166 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 M0R381 172 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 IFNA7P01567 189 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 IGHV3-11P01762 117 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 S100A11P31949 105 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 OPRK1P41145 380 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 S100A10P60903 97 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 CCL8P80075 99 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 PMAIP1Q13794 54 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 SMCO1Q147U7 214 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 IAH1Q2TAA2 248 aaPredicted RBP1.68□□□□□ -2.14
MCF2-204ENST00000414978 SP6Q3SY56 376 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 ZNF767PQ75MW2 155 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 H1FOOQ8IZA3 346 aaPredicted RBP1.68□□□□□ -2.14
MCF2-204ENST00000414978 ANKRD29Q8N6D5 301 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 ACY3Q96HD9 319 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 NMES1Q9C002 83 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 UQCC1Q9NVA1 299 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 LINC00527Q9UJ94 153 aa1.68□□□□□ -2.14
MCF2-204ENST00000414978 DNAH11Q96DT5 4516 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 TENM1Q9UKZ4 2725 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 IGKV1D-17A0A075B6S4 117 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 IGHV3-72A0A0B4J1Y9 119 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 A0A0D9SG52 128 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 KANTRA0A1W2PQU2 76 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 MPC2O95563 127 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 IGLV1-47P01700 117 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 HLA-DQA1P01909 254 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 TFF1P04155 84 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 SLC25A4P12235 298 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 EDDM3BP56851 147 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 BTN1A1Q13410 526 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 HMGN3Q15651 99 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 SCGB1D4Q6XE38 83 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 ZNF818PQ6ZRF7 136 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 NDUFA11Q86Y39 141 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 ZNF561Q8N587 486 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 DEFB108BQ8NET1 73 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 OR51H1Q8NH63 302 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 RNASE11Q8TAA1 199 aaKnown RBP1.67□□□□□ -2.14
MCF2-204ENST00000414978 UBALD1Q8TB05 177 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 ARL11Q969Q4 196 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 SPIN2AQ99865 258 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 SPIN2BQ9BPZ2 258 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 CADP27708 2225 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 PKHD1P08F94 4074 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 TRAV14DV4A0A0A6YYC5 116 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 TRAV38-1A0A0B4J264 116 aa1.67□□□□□ -2.14
MCF2-204ENST00000414978 ODAMA1E959 279 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms