RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 SGK494Q96LW2 274 aa9.72□□□□□ -0.85
RAPGEF1-204ENST00000414781 NIPSNAP3BQ9BS92 247 aa9.72□□□□□ -0.85
RAPGEF1-204ENST00000414781 C1QTNF4Q9BXJ3 329 aa9.72□□□□□ -0.85
RAPGEF1-204ENST00000414781 F8W036 122 aa9.71□□□□□ -0.86
RAPGEF1-204ENST00000414781 IGKV3-20P01619 116 aa9.71□□□□□ -0.86
RAPGEF1-204ENST00000414781 GPX1P07203 203 aa9.71□□□□□ -0.86
RAPGEF1-204ENST00000414781 CRISP2P16562 243 aa9.71□□□□□ -0.86
RAPGEF1-204ENST00000414781 CDKN1BP46527 198 aa9.71□□□□□ -0.86
RAPGEF1-204ENST00000414781 ZNF124Q15973 351 aa9.71□□□□□ -0.86
RAPGEF1-204ENST00000414781 SMUG1Q53HV7 270 aa9.71□□□□□ -0.86
RAPGEF1-204ENST00000414781 CENPWQ5EE01 88 aa9.71□□□□□ -0.86
RAPGEF1-204ENST00000414781 COX8CQ7Z4L0 72 aa9.71□□□□□ -0.86
RAPGEF1-204ENST00000414781 SLC7A5P1Q8MH63 180 aa9.71□□□□□ -0.86
RAPGEF1-204ENST00000414781 DERL1Q9BUN8 251 aa9.71□□□□□ -0.86
RAPGEF1-204ENST00000414781 SEC11CQ9BY50 192 aa9.71□□□□□ -0.86
RAPGEF1-204ENST00000414781 NAT8Q9UHE5 227 aa9.71□□□□□ -0.86
RAPGEF1-204ENST00000414781 SRRM2Q9UQ35 2752 aaKnown RBP9.71□□□□□ -0.86
RAPGEF1-204ENST00000414781 DEFB4AO15263 64 aa9.7□□□□□ -0.86
RAPGEF1-204ENST00000414781 Q8TAT8 98 aa9.7□□□□□ -0.86
RAPGEF1-204ENST00000414781 FAM19A4Q96LR4 140 aa9.7□□□□□ -0.86
RAPGEF1-204ENST00000414781 NDUFAF3Q9BU61 184 aa9.7□□□□□ -0.86
RAPGEF1-204ENST00000414781 RBMY1A1P0DJD3 496 aaKnown RBP9.69□□□□□ -0.86
RAPGEF1-204ENST00000414781 PRB4P10163 310 aaPredicted RBP9.69□□□□□ -0.86
RAPGEF1-204ENST00000414781 PNRC1Q12796 327 aaPredicted RBP9.69□□□□□ -0.86
RAPGEF1-204ENST00000414781 AMTNQ6UX39 209 aa9.69□□□□□ -0.86
RAPGEF1-204ENST00000414781 Q6ZTC4 211 aa9.69□□□□□ -0.86
RAPGEF1-204ENST00000414781 IGF2BP2-AS1Q96M15 143 aa9.69□□□□□ -0.86
RAPGEF1-204ENST00000414781 C20orf144Q9BQM9 153 aa9.69□□□□□ -0.86
RAPGEF1-204ENST00000414781 MYCBP2O75592 4640 aa9.68□□□□□ -0.86
RAPGEF1-204ENST00000414781 IGLV2-18A0A075B6J9 118 aa9.68□□□□□ -0.86
RAPGEF1-204ENST00000414781 FABP5P3A8MUU1 101 aa9.68□□□□□ -0.86
RAPGEF1-204ENST00000414781 KLLNB2CW77 178 aa9.68□□□□□ -0.86
RAPGEF1-204ENST00000414781 MGST1P10620 155 aaKnown RBP9.68□□□□□ -0.86
RAPGEF1-204ENST00000414781 UBE2DNLQ8IWF7 75 aa9.68□□□□□ -0.86
RAPGEF1-204ENST00000414781 OCC1Q8TAD7 63 aa9.68□□□□□ -0.86
RAPGEF1-204ENST00000414781 DAZAP1Q96EP5 407 aaKnown RBP9.68□□□□□ -0.86
RAPGEF1-204ENST00000414781 TVP23CQ96ET8 276 aa9.68□□□□□ -0.86
RAPGEF1-204ENST00000414781 MLST8Q9BVC4 326 aa9.68□□□□□ -0.86
RAPGEF1-204ENST00000414781 TRBV20OR9-2A0A075B6H5 130 aa9.67□□□□□ -0.86
RAPGEF1-204ENST00000414781 TRAV21A0A0B4J279 112 aa9.67□□□□□ -0.86
RAPGEF1-204ENST00000414781 GCGP01275 180 aa9.67□□□□□ -0.86
RAPGEF1-204ENST00000414781 RNASE4P34096 147 aaKnown RBP9.67□□□□□ -0.86
RAPGEF1-204ENST00000414781 SPINK13Q1W4C9 94 aa9.67□□□□□ -0.86
RAPGEF1-204ENST00000414781 FAM162BQ5T6X4 162 aa9.67□□□□□ -0.86
RAPGEF1-204ENST00000414781 ZFAND2AQ8N6M9 145 aa9.67□□□□□ -0.86
RAPGEF1-204ENST00000414781 C7orf71A4D174 169 aa9.66□□□□□ -0.86
RAPGEF1-204ENST00000414781 INSP01308 110 aa9.66□□□□□ -0.86
RAPGEF1-204ENST00000414781 PFN1P07737 140 aaKnown RBP9.66□□□□□ -0.86
RAPGEF1-204ENST00000414781 TNP2Q05952 138 aa9.66□□□□□ -0.86
RAPGEF1-204ENST00000414781 C10orf91Q5T1B1 145 aa9.66□□□□□ -0.86
RAPGEF1-204ENST00000414781 LINC01551Q86U37 167 aa9.66□□□□□ -0.86
RAPGEF1-204ENST00000414781 Q8NAQ8 132 aa9.66□□□□□ -0.86
RAPGEF1-204ENST00000414781 C18orf15Q96N68 181 aa9.66□□□□□ -0.86
RAPGEF1-204ENST00000414781 C8orf49Q96NF6 230 aa9.66□□□□□ -0.86
RAPGEF1-204ENST00000414781 SDF2L1Q9HCN8 221 aa9.66□□□□□ -0.86
RAPGEF1-204ENST00000414781 CARHSP1Q9Y2V2 147 aaKnown RBP9.66□□□□□ -0.86
RAPGEF1-204ENST00000414781 B4DEV8 164 aa9.65□□□□□ -0.86
RAPGEF1-204ENST00000414781 M0R2Z0 102 aa9.65□□□□□ -0.86
RAPGEF1-204ENST00000414781 CA1P00915 261 aaPredicted RBP9.65□□□□□ -0.86
RAPGEF1-204ENST00000414781 IGLV2-8P01709 118 aa9.65□□□□□ -0.86
RAPGEF1-204ENST00000414781 RPL23P62829 140 aaKnown RBP9.65□□□□□ -0.86
RAPGEF1-204ENST00000414781 Q6AWC8 147 aa9.65□□□□□ -0.86
RAPGEF1-204ENST00000414781 TMEM256Q8N2U0 113 aa9.65□□□□□ -0.86
RAPGEF1-204ENST00000414781 C15orf54Q8N8G6 183 aa9.65□□□□□ -0.86
RAPGEF1-204ENST00000414781 NHLRC2Q8NBF2 726 aa9.65□□□□□ -0.86
RAPGEF1-204ENST00000414781 ZC2HC1AQ96GY0 325 aa9.65□□□□□ -0.86
RAPGEF1-204ENST00000414781 GOLT1BQ9Y3E0 138 aa9.65□□□□□ -0.86
RAPGEF1-204ENST00000414781 DEFB131BA0A096LNP1 70 aa9.64□□□□□ -0.87
RAPGEF1-204ENST00000414781 PGPEP1LA6NFU8 196 aa9.64□□□□□ -0.87
RAPGEF1-204ENST00000414781 J3KRW8 73 aa9.64□□□□□ -0.87
RAPGEF1-204ENST00000414781 FXYD7P58549 80 aa9.64□□□□□ -0.87
RAPGEF1-204ENST00000414781 ERVFC1-1P60608 527 aa9.64□□□□□ -0.87
RAPGEF1-204ENST00000414781 ADIRFQ15847 76 aa9.64□□□□□ -0.87
RAPGEF1-204ENST00000414781 GFI1BQ5VTD9 330 aa9.64□□□□□ -0.87
RAPGEF1-204ENST00000414781 PRR27Q6MZM9 219 aa9.64□□□□□ -0.87
RAPGEF1-204ENST00000414781 SVBPQ8N300 66 aa9.64□□□□□ -0.87
RAPGEF1-204ENST00000414781 TMEM208Q9BTX3 173 aa9.64□□□□□ -0.87
RAPGEF1-204ENST00000414781 XCL2Q9UBD3 114 aa9.64□□□□□ -0.87
RAPGEF1-204ENST00000414781 TRAV12-2A0A075B6T6 113 aa9.63□□□□□ -0.87
RAPGEF1-204ENST00000414781 TRAV12-3A0A0B4J271 114 aa9.63□□□□□ -0.87
RAPGEF1-204ENST00000414781 H7BYZ3 331 aa9.63□□□□□ -0.87
RAPGEF1-204ENST00000414781 M0R036 132 aa9.63□□□□□ -0.87
RAPGEF1-204ENST00000414781 P01737 135 aa9.63□□□□□ -0.87
RAPGEF1-204ENST00000414781 MIFP14174 115 aa9.63□□□□□ -0.87
RAPGEF1-204ENST00000414781 RNF212Q495C1 297 aa9.63□□□□□ -0.87
RAPGEF1-204ENST00000414781 FAM159AQ6UWV7 190 aa9.63□□□□□ -0.87
RAPGEF1-204ENST00000414781 FAM231DQ6ZW35 169 aa9.63□□□□□ -0.87
RAPGEF1-204ENST00000414781 KCNS1Q96KK3 526 aa9.63□□□□□ -0.87
RAPGEF1-204ENST00000414781 PYGO2Q9BRQ0 406 aa9.63□□□□□ -0.87
RAPGEF1-204ENST00000414781 IGHV4-28A0A0C4DH34 117 aa9.62□□□□□ -0.87
RAPGEF1-204ENST00000414781 XKRY2A2RUG3 117 aa9.62□□□□□ -0.87
RAPGEF1-204ENST00000414781 PPP1R2P9O14990 202 aa9.62□□□□□ -0.87
RAPGEF1-204ENST00000414781 CRXO43186 299 aaPredicted RBP9.62□□□□□ -0.87
RAPGEF1-204ENST00000414781 ZNF324O75467 553 aaPredicted RBP9.62□□□□□ -0.87
RAPGEF1-204ENST00000414781 SNAPINO95295 136 aa9.62□□□□□ -0.87
RAPGEF1-204ENST00000414781 APOC3P02656 99 aa9.62□□□□□ -0.87
RAPGEF1-204ENST00000414781 MT-ND4LP03901 98 aa9.62□□□□□ -0.87
RAPGEF1-204ENST00000414781 ADCYAP1P18509 176 aa9.62□□□□□ -0.87
RAPGEF1-204ENST00000414781 CRIP1P50238 77 aa9.62□□□□□ -0.87
RAPGEF1-204ENST00000414781 RPS20P60866 119 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 190.6 ms