RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 ORM1P02763 201 aa12.96□□□□□ -0.33
CPSF7-204ENST00000413232 PET100P0DJ07 73 aa12.96□□□□□ -0.33
CPSF7-204ENST00000413232 ACOT6Q3I5F7 207 aaPredicted RBP12.96□□□□□ -0.33
CPSF7-204ENST00000413232 PCNPQ8WW12 178 aaKnown RBP12.96□□□□□ -0.33
CPSF7-204ENST00000413232 TREM1Q9NP99 234 aa12.96□□□□□ -0.33
CPSF7-204ENST00000413232 TRAV9-2A0A087WT02 112 aa12.95□□□□□ -0.34
CPSF7-204ENST00000413232 TRAV21A0A0B4J279 112 aa12.95□□□□□ -0.34
CPSF7-204ENST00000413232 EREGO14944 169 aa12.95□□□□□ -0.34
CPSF7-204ENST00000413232 CDPF1Q6NVV7 123 aa12.95□□□□□ -0.34
CPSF7-204ENST00000413232 PQLC2Q6ZP29 291 aa12.95□□□□□ -0.34
CPSF7-204ENST00000413232 PTTG2Q9NZH5 202 aa12.95□□□□□ -0.34
CPSF7-204ENST00000413232 C11orf21Q9P2W6 132 aa12.95□□□□□ -0.34
CPSF7-204ENST00000413232 A0A1W2PPV4 95 aa12.94□□□□□ -0.34
CPSF7-204ENST00000413232 EPM2AB3EWF7 344 aa12.94□□□□□ -0.34
CPSF7-204ENST00000413232 C9JCJ5 164 aa12.94□□□□□ -0.34
CPSF7-204ENST00000413232 GATA1P15976 413 aaPredicted RBP12.94□□□□□ -0.34
CPSF7-204ENST00000413232 EVI2AP22794 236 aa12.94□□□□□ -0.34
CPSF7-204ENST00000413232 ZNF80P51504 273 aaPredicted RBP12.94□□□□□ -0.34
CPSF7-204ENST00000413232 DPPA3Q6W0C5 159 aa12.94□□□□□ -0.34
CPSF7-204ENST00000413232 OR10G9Q8NGN4 311 aa12.94□□□□□ -0.34
CPSF7-204ENST00000413232 OR10G7Q8NGN6 311 aa12.94□□□□□ -0.34
CPSF7-204ENST00000413232 TXNDC17Q9BRA2 123 aa12.94□□□□□ -0.34
CPSF7-204ENST00000413232 CRYGDP07320 174 aa12.93□□□□□ -0.34
CPSF7-204ENST00000413232 ARL14EPLP0DKL9 152 aa12.93□□□□□ -0.34
CPSF7-204ENST00000413232 FAM74A1Q5RGS3 127 aa12.93□□□□□ -0.34
CPSF7-204ENST00000413232 ARL6IP6Q8N6S5 226 aa12.93□□□□□ -0.34
CPSF7-204ENST00000413232 SDF2L1Q9HCN8 221 aa12.92□□□□□ -0.34
CPSF7-204ENST00000413232 K7EP13 123 aa12.91□□□□□ -0.34
CPSF7-204ENST00000413232 TMEM75Q8N9X5 138 aa12.91□□□□□ -0.34
CPSF7-204ENST00000413232 ASB13Q8WXK3 278 aa12.91□□□□□ -0.34
CPSF7-204ENST00000413232 IGLV2-11P01706 119 aa12.9□□□□□ -0.34
CPSF7-204ENST00000413232 STAG3L2P0CL84 134 aa12.9□□□□□ -0.34
CPSF7-204ENST00000413232 STAG3L3P0CL85 134 aa12.9□□□□□ -0.34
CPSF7-204ENST00000413232 SLC25A29Q8N8R3 303 aa12.9□□□□□ -0.34
CPSF7-204ENST00000413232 NHLRC2Q8NBF2 726 aa12.9□□□□□ -0.34
CPSF7-204ENST00000413232 HERC1Q15751 4861 aa12.9□□□□□ -0.34
CPSF7-204ENST00000413232 FLG2Q5D862 2391 aaPredicted RBP12.89□□□□□ -0.35
CPSF7-204ENST00000413232 TCRAP04437 139 aa12.89□□□□□ -0.35
CPSF7-204ENST00000413232 CDC34P49427 236 aaPredicted RBP12.89□□□□□ -0.35
CPSF7-204ENST00000413232 DEFA1P59665 94 aa12.89□□□□□ -0.35
CPSF7-204ENST00000413232 DEFA3P59666 94 aa12.89□□□□□ -0.35
CPSF7-204ENST00000413232 ZNF876PQ49A33 203 aa12.89□□□□□ -0.35
CPSF7-204ENST00000413232 CFAP126Q5VTH2 177 aa12.89□□□□□ -0.35
CPSF7-204ENST00000413232 HSD17B11Q8NBQ5 300 aa12.89□□□□□ -0.35
CPSF7-204ENST00000413232 SUN5Q8TC36 379 aa12.89□□□□□ -0.35
CPSF7-204ENST00000413232 RAB24Q969Q5 203 aa12.89□□□□□ -0.35
CPSF7-204ENST00000413232 KCNS1Q96KK3 526 aa12.89□□□□□ -0.35
CPSF7-204ENST00000413232 ALG5Q9Y673 324 aa12.89□□□□□ -0.35
CPSF7-204ENST00000413232 VPS13BQ7Z7G8 4022 aa12.89□□□□□ -0.35
CPSF7-204ENST00000413232 IGHV3-73A0A0B4J1V6 119 aa12.88□□□□□ -0.35
CPSF7-204ENST00000413232 IGHV3-38A0A0C4DH36 116 aa12.88□□□□□ -0.35
CPSF7-204ENST00000413232 LRCOL1A6NCL2 159 aa12.88□□□□□ -0.35
CPSF7-204ENST00000413232 FBLL1A6NHQ2 334 aaKnown RBP12.88□□□□□ -0.35
CPSF7-204ENST00000413232 RS1O15537 224 aa12.88□□□□□ -0.35
CPSF7-204ENST00000413232 GCHFRP30047 84 aa12.88□□□□□ -0.35
CPSF7-204ENST00000413232 TIRAPP58753 221 aa12.88□□□□□ -0.35
CPSF7-204ENST00000413232 HAMPP81172 84 aa12.88□□□□□ -0.35
CPSF7-204ENST00000413232 C9orf85Q96MD7 179 aa12.88□□□□□ -0.35
CPSF7-204ENST00000413232 PSG8Q9UQ74 426 aa12.88□□□□□ -0.35
CPSF7-204ENST00000413232 PGPEP1LA6NFU8 196 aa12.87□□□□□ -0.35
CPSF7-204ENST00000413232 GCGP01275 180 aa12.87□□□□□ -0.35
CPSF7-204ENST00000413232 ATP6V0CP27449 155 aa12.87□□□□□ -0.35
CPSF7-204ENST00000413232 Q5VSD8 79 aa12.87□□□□□ -0.35
CPSF7-204ENST00000413232 C10orf126Q8N4M7 172 aa12.87□□□□□ -0.35
CPSF7-204ENST00000413232 C5orf17Q8NAS9 161 aa12.87□□□□□ -0.35
CPSF7-204ENST00000413232 OR2G3Q8NGZ4 309 aa12.87□□□□□ -0.35
CPSF7-204ENST00000413232 GGTLC3B5MD39 225 aa12.86□□□□□ -0.35
CPSF7-204ENST00000413232 SMR3BP02814 79 aaPredicted RBP12.86□□□□□ -0.35
CPSF7-204ENST00000413232 RNASE3P12724 160 aaKnown RBP12.86□□□□□ -0.35
CPSF7-204ENST00000413232 GCSHP23434 173 aa12.86□□□□□ -0.35
CPSF7-204ENST00000413232 PPT1P50897 306 aa12.86□□□□□ -0.35
CPSF7-204ENST00000413232 SUMO1P63165 101 aaKnown RBP12.86□□□□□ -0.35
CPSF7-204ENST00000413232 Q5BKY6 102 aa12.86□□□□□ -0.35
CPSF7-204ENST00000413232 LINC01556Q5JQF7 62 aa12.86□□□□□ -0.35
CPSF7-204ENST00000413232 SH2D6Q7Z4S9 175 aa12.86□□□□□ -0.35
CPSF7-204ENST00000413232 SH3BGRL3Q9H299 93 aa12.86□□□□□ -0.35
CPSF7-204ENST00000413232 IBA57-AS1B1ANH7 110 aa12.85□□□□□ -0.35
CPSF7-204ENST00000413232 INAFM2P0DMQ5 153 aa12.85□□□□□ -0.35
CPSF7-204ENST00000413232 ZNF506Q5JVG8 444 aa12.85□□□□□ -0.35
CPSF7-204ENST00000413232 Q6ZSN1 163 aa12.85□□□□□ -0.35
CPSF7-204ENST00000413232 NDFIP1Q9BT67 221 aa12.85□□□□□ -0.35
CPSF7-204ENST00000413232 PSMG3Q9BT73 122 aaPredicted RBP12.85□□□□□ -0.35
CPSF7-204ENST00000413232 SRRM2Q9UQ35 2752 aaKnown RBP12.85□□□□□ -0.35
CPSF7-204ENST00000413232 DMBT1Q9UGM3 2413 aaPredicted RBP12.84□□□□□ -0.35
CPSF7-204ENST00000413232 SERTM2A0A1B0GWG4 89 aa12.84□□□□□ -0.35
CPSF7-204ENST00000413232 TRBV6-4A0A1B0GX49 114 aa12.84□□□□□ -0.35
CPSF7-204ENST00000413232 TAAR5O14804 337 aa12.84□□□□□ -0.35
CPSF7-204ENST00000413232 PFN1P07737 140 aaKnown RBP12.84□□□□□ -0.35
CPSF7-204ENST00000413232 FLI1Q01543 452 aaPredicted RBP12.84□□□□□ -0.35
CPSF7-204ENST00000413232 PRNTQ86SH4 94 aa12.84□□□□□ -0.35
CPSF7-204ENST00000413232 Q8N3U1 123 aa12.84□□□□□ -0.35
CPSF7-204ENST00000413232 LINC00479Q96M42 142 aa12.84□□□□□ -0.35
CPSF7-204ENST00000413232 AQP10Q96PS8 301 aa12.84□□□□□ -0.35
CPSF7-204ENST00000413232 EPDR1Q9UM22 224 aa12.84□□□□□ -0.35
CPSF7-204ENST00000413232 IGHV3-30P01768 117 aa12.83□□□□□ -0.36
CPSF7-204ENST00000413232 IGHV3-33P01772 117 aa12.83□□□□□ -0.36
CPSF7-204ENST00000413232 IGHV3-30-3P0DP02 117 aa12.83□□□□□ -0.36
CPSF7-204ENST00000413232 IGHV3-30-5P0DP03 117 aa12.83□□□□□ -0.36
CPSF7-204ENST00000413232 OR10J3Q5JRS4 329 aa12.83□□□□□ -0.36
CPSF7-204ENST00000413232 PRADC1Q9BSG0 188 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms