RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 BTF3P20290 206 aaKnown RBP12.88□□□□□ -0.35
ITGA6-204ENST00000412899 KRTAP10-2P60368 255 aa12.88□□□□□ -0.35
ITGA6-204ENST00000412899 UBE2G2P60604 165 aa12.88□□□□□ -0.35
ITGA6-204ENST00000412899 EIF5AP63241 154 aaKnown RBP12.88□□□□□ -0.35
ITGA6-204ENST00000412899 MUC21Q5SSG8 566 aa12.88□□□□□ -0.35
ITGA6-204ENST00000412899 TCTE3Q8IZS6 198 aa12.88□□□□□ -0.35
ITGA6-204ENST00000412899 C11orf72Q8NBR9 251 aa12.88□□□□□ -0.35
ITGA6-204ENST00000412899 MAP1LC3BQ9GZQ8 125 aa12.88□□□□□ -0.35
ITGA6-204ENST00000412899 TREM1Q9NP99 234 aa12.88□□□□□ -0.35
ITGA6-204ENST00000412899 IFNA7P01567 189 aa12.87□□□□□ -0.35
ITGA6-204ENST00000412899 FHITP49789 147 aa12.87□□□□□ -0.35
ITGA6-204ENST00000412899 Q6AWC8 147 aa12.87□□□□□ -0.35
ITGA6-204ENST00000412899 Q6ZTI0 123 aa12.87□□□□□ -0.35
ITGA6-204ENST00000412899 STOML3Q8TAV4 291 aa12.87□□□□□ -0.35
ITGA6-204ENST00000412899 TVP23CQ96ET8 276 aa12.87□□□□□ -0.35
ITGA6-204ENST00000412899 NDFIP1Q9BT67 221 aa12.87□□□□□ -0.35
ITGA6-204ENST00000412899 hCG_2014768A0A024R1R8 64 aa12.86□□□□□ -0.35
ITGA6-204ENST00000412899 TRGV2A0A075B6R0 118 aa12.86□□□□□ -0.35
ITGA6-204ENST00000412899 UMAD1C9J7I0 102 aa12.86□□□□□ -0.35
ITGA6-204ENST00000412899 F6UZH7 168 aa12.86□□□□□ -0.35
ITGA6-204ENST00000412899 FAM159AQ6UWV7 190 aa12.86□□□□□ -0.35
ITGA6-204ENST00000412899 KLF12Q9Y4X4 402 aa12.86□□□□□ -0.35
ITGA6-204ENST00000412899 TCL1AP56279 114 aa12.85□□□□□ -0.35
ITGA6-204ENST00000412899 IBA57Q5T440 356 aaKnown RBP12.85□□□□□ -0.35
ITGA6-204ENST00000412899 CYB561D1Q8N8Q1 229 aa12.85□□□□□ -0.35
ITGA6-204ENST00000412899 FAM213BQ8TBF2 198 aa12.85□□□□□ -0.35
ITGA6-204ENST00000412899 NKX6-2Q9C056 277 aaPredicted RBP12.85□□□□□ -0.35
ITGA6-204ENST00000412899 NAGKQ9UJ70 344 aa12.85□□□□□ -0.35
ITGA6-204ENST00000412899 PSG8Q9UQ74 426 aa12.85□□□□□ -0.35
ITGA6-204ENST00000412899 HSPG2P98160 4391 aa12.85□□□□□ -0.35
ITGA6-204ENST00000412899 TRGV1A0A0A0MS02 117 aa12.84□□□□□ -0.35
ITGA6-204ENST00000412899 TRAV21A0A0B4J279 112 aa12.84□□□□□ -0.35
ITGA6-204ENST00000412899 FAM74A7A6NL05 159 aa12.84□□□□□ -0.35
ITGA6-204ENST00000412899 TPT1P13693 172 aaKnown RBP12.84□□□□□ -0.35
ITGA6-204ENST00000412899 PRNTQ86SH4 94 aa12.84□□□□□ -0.35
ITGA6-204ENST00000412899 SFT2D1Q8WV19 159 aa12.84□□□□□ -0.35
ITGA6-204ENST00000412899 VSIG2Q96IQ7 327 aa12.84□□□□□ -0.35
ITGA6-204ENST00000412899 A0A096LPF7 62 aa12.83□□□□□ -0.36
ITGA6-204ENST00000412899 IGLV2-11P01706 119 aa12.83□□□□□ -0.36
ITGA6-204ENST00000412899 LINC00315P59091 139 aa12.83□□□□□ -0.36
ITGA6-204ENST00000412899 FLI1Q01543 452 aaPredicted RBP12.83□□□□□ -0.36
ITGA6-204ENST00000412899 ZNF415Q09FC8 603 aa12.83□□□□□ -0.36
ITGA6-204ENST00000412899 LGALSLQ3ZCW2 172 aaPredicted RBP12.83□□□□□ -0.36
ITGA6-204ENST00000412899 AKAP14Q86UN6 197 aa12.83□□□□□ -0.36
ITGA6-204ENST00000412899 TMEM75Q8N9X5 138 aa12.83□□□□□ -0.36
ITGA6-204ENST00000412899 LINC00479Q96M42 142 aa12.83□□□□□ -0.36
ITGA6-204ENST00000412899 FBLL1A6NHQ2 334 aaKnown RBP12.82□□□□□ -0.36
ITGA6-204ENST00000412899 SPINK4O60575 86 aa12.82□□□□□ -0.36
ITGA6-204ENST00000412899 C1QBP02746 253 aa12.82□□□□□ -0.36
ITGA6-204ENST00000412899 TMEM183BQ1AE95 376 aa12.82□□□□□ -0.36
ITGA6-204ENST00000412899 DPPA3Q6W0C5 159 aa12.82□□□□□ -0.36
ITGA6-204ENST00000412899 TMEM183AQ8IXX5 376 aa12.82□□□□□ -0.36
ITGA6-204ENST00000412899 MBD3L1Q8WWY6 194 aa12.82□□□□□ -0.36
ITGA6-204ENST00000412899 C8orf49Q96NF6 230 aa12.82□□□□□ -0.36
ITGA6-204ENST00000412899 MDFICQ9P1T7 246 aa12.82□□□□□ -0.36
ITGA6-204ENST00000412899 TRGV11A0A075B6L2 103 aa12.81□□□□□ -0.36
ITGA6-204ENST00000412899 TRAV34A0A0B4J273 112 aa12.81□□□□□ -0.36
ITGA6-204ENST00000412899 A0A1B0GV50 99 aa12.81□□□□□ -0.36
ITGA6-204ENST00000412899 PEX7O00628 323 aa12.81□□□□□ -0.36
ITGA6-204ENST00000412899 SIVA1O15304 175 aa12.81□□□□□ -0.36
ITGA6-204ENST00000412899 PPT1P50897 306 aa12.81□□□□□ -0.36
ITGA6-204ENST00000412899 SAPCD1Q5SSQ6 148 aa12.81□□□□□ -0.36
ITGA6-204ENST00000412899 CST9LP1Q5W188 147 aa12.81□□□□□ -0.36
ITGA6-204ENST00000412899 C18orf15Q96N68 181 aa12.81□□□□□ -0.36
ITGA6-204ENST00000412899 GNRH2O43555 120 aa12.8□□□□□ -0.36
ITGA6-204ENST00000412899 H2AFB1P0C5Y9 115 aa12.8□□□□□ -0.36
ITGA6-204ENST00000412899 TDRG1Q3Y452 100 aa12.8□□□□□ -0.36
ITGA6-204ENST00000412899 ZFP69Q49AA0 526 aa12.8□□□□□ -0.36
ITGA6-204ENST00000412899 SMUG1Q53HV7 270 aa12.8□□□□□ -0.36
ITGA6-204ENST00000412899 HIST1H2BAQ96A08 127 aa12.8□□□□□ -0.36
ITGA6-204ENST00000412899 MRPL16Q9NX20 251 aaKnown RBP12.8□□□□□ -0.36
ITGA6-204ENST00000412899 GCGP01275 180 aa12.79□□□□□ -0.36
ITGA6-204ENST00000412899 EIF5AL1Q6IS14 154 aaKnown RBP12.79□□□□□ -0.36
ITGA6-204ENST00000412899 ICOSQ9Y6W8 199 aa12.79□□□□□ -0.36
ITGA6-204ENST00000412899 LRP1BQ9NZR2 4599 aa12.78□□□□□ -0.36
ITGA6-204ENST00000412899 EREGO14944 169 aa12.78□□□□□ -0.36
ITGA6-204ENST00000412899 PAX4O43316 350 aa12.78□□□□□ -0.36
ITGA6-204ENST00000412899 PAGE4O60829 102 aa12.78□□□□□ -0.36
ITGA6-204ENST00000412899 ZNF80P51504 273 aaPredicted RBP12.78□□□□□ -0.36
ITGA6-204ENST00000412899 KCNS1Q96KK3 526 aa12.78□□□□□ -0.36
ITGA6-204ENST00000412899 SPXQ9BT56 116 aa12.78□□□□□ -0.36
ITGA6-204ENST00000412899 SDF2L1Q9HCN8 221 aa12.78□□□□□ -0.36
ITGA6-204ENST00000412899 PGPEP1Q9NXJ5 209 aa12.78□□□□□ -0.36
ITGA6-204ENST00000412899 ARL2-SNX15V9GYD0 113 aa12.78□□□□□ -0.36
ITGA6-204ENST00000412899 NXPH4O95158 308 aa12.77□□□□□ -0.37
ITGA6-204ENST00000412899 IGHV3-53P01767 116 aa12.77□□□□□ -0.37
ITGA6-204ENST00000412899 PFN1P07737 140 aaKnown RBP12.77□□□□□ -0.37
ITGA6-204ENST00000412899 Q6ZRN7 208 aaPredicted RBP12.77□□□□□ -0.37
ITGA6-204ENST00000412899 TCEAL7Q9BRU2 100 aa12.77□□□□□ -0.37
ITGA6-204ENST00000412899 IGHV3-16A0A0C4DH30 117 aa12.76□□□□□ -0.37
ITGA6-204ENST00000412899 EPM2AB3EWF7 344 aa12.76□□□□□ -0.37
ITGA6-204ENST00000412899 TYMSP04818 313 aa12.76□□□□□ -0.37
ITGA6-204ENST00000412899 RAB5CP51148 216 aa12.76□□□□□ -0.37
ITGA6-204ENST00000412899 ERVFC1-1P60608 527 aa12.76□□□□□ -0.37
ITGA6-204ENST00000412899 SLC51BQ86UW2 128 aa12.76□□□□□ -0.37
ITGA6-204ENST00000412899 UBE2G1P62253 170 aa12.75□□□□□ -0.37
ITGA6-204ENST00000412899 Q86TA4 180 aa12.75□□□□□ -0.37
ITGA6-204ENST00000412899 FMC1Q96HJ9 113 aa12.75□□□□□ -0.37
ITGA6-204ENST00000412899 C11orf21Q9P2W6 132 aa12.75□□□□□ -0.37
ITGA6-204ENST00000412899 PRO0255Q9UI72 69 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms