RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 IGKV3D-20A0A0C4DH25 116 aa8.75□□□□□ -1.01
PTPRF-204ENST00000412568 KNCNA6PVL3 124 aa8.75□□□□□ -1.01
PTPRF-204ENST00000412568 TSPAN13O95857 204 aa8.75□□□□□ -1.01
PTPRF-204ENST00000412568 IGHV3-53P01767 116 aa8.75□□□□□ -1.01
PTPRF-204ENST00000412568 RNASE1P07998 156 aaKnown RBP8.75□□□□□ -1.01
PTPRF-204ENST00000412568 CTSGP08311 255 aa8.75□□□□□ -1.01
PTPRF-204ENST00000412568 C19orf54Q5BKX5 351 aa8.75□□□□□ -1.01
PTPRF-204ENST00000412568 PRR25Q96S07 402 aa8.75□□□□□ -1.01
PTPRF-204ENST00000412568 ZNF815PA8K554 130 aa8.75□□□□□ -1.01
PTPRF-204ENST00000412568 PAX1P15863 534 aa8.75□□□□□ -1.01
PTPRF-204ENST00000412568 ZNF492Q9P255 531 aa8.75□□□□□ -1.01
PTPRF-204ENST00000412568 CYSLTR1Q9Y271 337 aa8.75□□□□□ -1.01
PTPRF-204ENST00000412568 FREM2Q5SZK8 3169 aa8.75□□□□□ -1.01
PTPRF-204ENST00000412568 COL4A2P08572 1712 aa8.75□□□□□ -1.01
PTPRF-204ENST00000412568 IFI27P40305 119 aaPredicted RBP8.75□□□□□ -1.01
PTPRF-204ENST00000412568 FAM231BA6NCW3 169 aa8.74□□□□□ -1.01
PTPRF-204ENST00000412568 PPBPP02775 128 aa8.74□□□□□ -1.01
PTPRF-204ENST00000412568 TDRG1Q3Y452 100 aa8.74□□□□□ -1.01
PTPRF-204ENST00000412568 TCTEX1D4Q5JR98 221 aa8.74□□□□□ -1.01
PTPRF-204ENST00000412568 KLK9Q9UKQ9 250 aa8.74□□□□□ -1.01
PTPRF-204ENST00000412568 CIRBPQ14011 172 aaKnown RBP8.74□□□□□ -1.01
PTPRF-204ENST00000412568 IGLV11-55A0A075B6I3 123 aa8.74□□□□□ -1.01
PTPRF-204ENST00000412568 SUMO2P61956 95 aaKnown RBP8.74□□□□□ -1.01
PTPRF-204ENST00000412568 DEFB113Q30KQ7 82 aa8.74□□□□□ -1.01
PTPRF-204ENST00000412568 COA6Q5JTJ3 125 aaKnown RBP8.74□□□□□ -1.01
PTPRF-204ENST00000412568 ANAPC13Q9BS18 74 aa8.73□□□□□ -1.01
PTPRF-204ENST00000412568 SIRPDQ9H106 197 aa8.73□□□□□ -1.01
PTPRF-204ENST00000412568 TMEM14CQ9P0S9 112 aa8.73□□□□□ -1.01
PTPRF-204ENST00000412568 XCL2Q9UBD3 114 aa8.73□□□□□ -1.01
PTPRF-204ENST00000412568 DUSP14O95147 198 aaKnown RBP8.73□□□□□ -1.01
PTPRF-204ENST00000412568 ANKRD17O75179 2603 aaKnown RBP8.73□□□□□ -1.01
PTPRF-204ENST00000412568 TMEM262E9PQX1 116 aa8.73□□□□□ -1.01
PTPRF-204ENST00000412568 UBE2L6O14933 153 aa8.73□□□□□ -1.01
PTPRF-204ENST00000412568 C10orf126Q8N4M7 172 aa8.73□□□□□ -1.01
PTPRF-204ENST00000412568 ZNF503Q96F45 646 aa8.73□□□□□ -1.01
PTPRF-204ENST00000412568 ESDP10768 282 aa8.72□□□□□ -1.01
PTPRF-204ENST00000412568 CT83Q5H943 113 aa8.72□□□□□ -1.01
PTPRF-204ENST00000412568 PAPPA-AS1Q5QFB9 102 aa8.72□□□□□ -1.01
PTPRF-204ENST00000412568 HIST2H2BDQ6DRA6 164 aa8.72□□□□□ -1.01
PTPRF-204ENST00000412568 NPBQ8NG41 125 aa8.72□□□□□ -1.01
PTPRF-204ENST00000412568 GFRA4Q9GZZ7 299 aa8.72□□□□□ -1.01
PTPRF-204ENST00000412568 COL5A1P20908 1838 aaPredicted RBP8.72□□□□□ -1.01
PTPRF-204ENST00000412568 A0A1W2PPR1 153 aa8.72□□□□□ -1.01
PTPRF-204ENST00000412568 SRSF1Q07955 248 aaKnown RBP eCLIP8.72□□□□□ -1.01
PTPRF-204ENST00000412568 FANCD2OSQ96PS1 177 aa8.72□□□□□ -1.01
PTPRF-204ENST00000412568 DSCAML1Q8TD84 2053 aa8.72□□□□□ -1.01
PTPRF-204ENST00000412568 TRAV26-2A0A0B4J265 109 aa8.72□□□□□ -1.01
PTPRF-204ENST00000412568 TRAV2A0A0B4J234 112 aa8.72□□□□□ -1.01
PTPRF-204ENST00000412568 A8MWV9 139 aa8.72□□□□□ -1.01
PTPRF-204ENST00000412568 PRSS46E5RG02 174 aa8.72□□□□□ -1.01
PTPRF-204ENST00000412568 PPP1R17O96001 155 aa8.72□□□□□ -1.01
PTPRF-204ENST00000412568 TRBV12-3P01733 135 aa8.72□□□□□ -1.01
PTPRF-204ENST00000412568 GP9P14770 177 aa8.72□□□□□ -1.01
PTPRF-204ENST00000412568 IGHV3-64A0A075B6Q5 118 aa8.71□□□□□ -1.01
PTPRF-204ENST00000412568 PRSS57Q6UWY2 283 aa8.71□□□□□ -1.01
PTPRF-204ENST00000412568 TEX43Q6ZNM6 134 aa8.71□□□□□ -1.01
PTPRF-204ENST00000412568 C5orf56Q8N8D9 126 aa8.71□□□□□ -1.01
PTPRF-204ENST00000412568 AGPAT4-IT1Q9H0P7 198 aa8.71□□□□□ -1.01
PTPRF-204ENST00000412568 LINC00574Q9H8X3 128 aa8.71□□□□□ -1.01
PTPRF-204ENST00000412568 A0A0U1RRA0 63 aa8.71□□□□□ -1.02
PTPRF-204ENST00000412568 ADAMTSL5Q6ZMM2 481 aa8.71□□□□□ -1.02
PTPRF-204ENST00000412568 AJUBAQ96IF1 538 aa8.71□□□□□ -1.02
PTPRF-204ENST00000412568 IGKV1D-37A0A075B6S9 117 aa8.71□□□□□ -1.02
PTPRF-204ENST00000412568 DNAL4O96015 105 aa8.71□□□□□ -1.02
PTPRF-204ENST00000412568 CKS1BP61024 79 aa8.71□□□□□ -1.02
PTPRF-204ENST00000412568 PAX2Q02962 417 aa8.71□□□□□ -1.02
PTPRF-204ENST00000412568 FOXE3Q13461 319 aa8.71□□□□□ -1.02
PTPRF-204ENST00000412568 CHTOPQ9Y3Y2 248 aaKnown RBP8.71□□□□□ -1.02
PTPRF-204ENST00000412568 REV3LO60673 3130 aa8.71□□□□□ -1.02
PTPRF-204ENST00000412568 NDUFA4O00483 81 aa8.7□□□□□ -1.02
PTPRF-204ENST00000412568 LTAP01374 205 aa8.7□□□□□ -1.02
PTPRF-204ENST00000412568 GAGE1Q13065 139 aa8.7□□□□□ -1.02
PTPRF-204ENST00000412568 ETDBQ3ZM63 59 aa8.7□□□□□ -1.02
PTPRF-204ENST00000412568 OR13C6PQ8NH95 151 aa8.7□□□□□ -1.02
PTPRF-204ENST00000412568 PRAC2D3DTV9 90 aa8.7□□□□□ -1.02
PTPRF-204ENST00000412568 TMEM158Q8WZ71 300 aa8.7□□□□□ -1.02
PTPRF-204ENST00000412568 VPREB3Q9UKI3 123 aa8.7□□□□□ -1.02
PTPRF-204ENST00000412568 TRGV1A0A0A0MS02 117 aa8.7□□□□□ -1.02
PTPRF-204ENST00000412568 ANXA2RQ3ZCQ2 193 aa8.69□□□□□ -1.02
PTPRF-204ENST00000412568 ZNF876PQ49A33 203 aa8.69□□□□□ -1.02
PTPRF-204ENST00000412568 FAM104BQ5XKR9 115 aa8.69□□□□□ -1.02
PTPRF-204ENST00000412568 KIR2DL5BA0A0G2JN68 375 aa8.69□□□□□ -1.02
PTPRF-204ENST00000412568 KIR2DL5BA0A0G2JPC4 375 aa8.69□□□□□ -1.02
PTPRF-204ENST00000412568 H7C1H1 209 aa8.69□□□□□ -1.02
PTPRF-204ENST00000412568 EGR2P11161 476 aaPredicted RBP8.69□□□□□ -1.02
PTPRF-204ENST00000412568 KIR2DL5AQ8N109 375 aa8.69□□□□□ -1.02
PTPRF-204ENST00000412568 LY6G5BQ8NDX9 201 aa8.69□□□□□ -1.02
PTPRF-204ENST00000412568 IGF2BP2-AS1Q96M15 143 aa8.69□□□□□ -1.02
PTPRF-204ENST00000412568 NEGR1Q7Z3B1 354 aa8.69□□□□□ -1.02
PTPRF-204ENST00000412568 SLURP1P55000 103 aa8.69□□□□□ -1.02
PTPRF-204ENST00000412568 GAGE2BQ13066 116 aa8.69□□□□□ -1.02
PTPRF-204ENST00000412568 GAGE2EQ4V326 116 aa8.69□□□□□ -1.02
PTPRF-204ENST00000412568 UNQ9165/PRO28630Q6UXU0 137 aa8.69□□□□□ -1.02
PTPRF-204ENST00000412568 VCX2Q9H322 139 aa8.69□□□□□ -1.02
PTPRF-204ENST00000412568 GAGE2DQ9UEU5 116 aa8.69□□□□□ -1.02
PTPRF-204ENST00000412568 IGHV3-16A0A0C4DH30 117 aa8.68□□□□□ -1.02
PTPRF-204ENST00000412568 HOXD3P31249 432 aaPredicted RBP8.68□□□□□ -1.02
PTPRF-204ENST00000412568 TMEM190Q8WZ59 177 aa8.68□□□□□ -1.02
PTPRF-204ENST00000412568 CHAC1Q9BUX1 264 aa8.68□□□□□ -1.02
PTPRF-204ENST00000412568 INS-IGF2F8WCM5 200 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms