RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 A1L4Q6 167 aa12.05□□□□□ -0.48
HOXD3-202ENST00000410016 C7orf71A4D174 169 aa12.05□□□□□ -0.48
HOXD3-202ENST00000410016 A6NDX4 124 aa12.05□□□□□ -0.48
HOXD3-202ENST00000410016 H3BVH4 76 aa12.05□□□□□ -0.48
HOXD3-202ENST00000410016 BLCAPP62952 87 aa12.05□□□□□ -0.48
HOXD3-202ENST00000410016 Q6ZS46 218 aa12.05□□□□□ -0.48
HOXD3-202ENST00000410016 UFC1Q9Y3C8 167 aa12.05□□□□□ -0.48
HOXD3-202ENST00000410016 H3BUA1 57 aa12.04□□□□□ -0.48
HOXD3-202ENST00000410016 PRSS1P07477 247 aa12.04□□□□□ -0.48
HOXD3-202ENST00000410016 SMIM17P0DL12 118 aa12.04□□□□□ -0.48
HOXD3-202ENST00000410016 NMUP48645 174 aa12.04□□□□□ -0.48
HOXD3-202ENST00000410016 DEFB1P60022 68 aa12.04□□□□□ -0.48
HOXD3-202ENST00000410016 MAP1AP78559 2803 aaPredicted RBP12.04□□□□□ -0.48
HOXD3-202ENST00000410016 H3BUX3 64 aa12.04□□□□□ -0.48
HOXD3-202ENST00000410016 IGHV3-11P01762 117 aa12.04□□□□□ -0.48
HOXD3-202ENST00000410016 CELSR2Q9HCU4 2923 aa12.04□□□□□ -0.48
HOXD3-202ENST00000410016 IGKV2D-26A0A0A0MRZ7 120 aa12.03□□□□□ -0.48
HOXD3-202ENST00000410016 FAM19A4Q96LR4 140 aa12.03□□□□□ -0.48
HOXD3-202ENST00000410016 CCL19Q99731 98 aa12.03□□□□□ -0.48
HOXD3-202ENST00000410016 IGHV4-30-2A0A087WSY4 118 aa12.03□□□□□ -0.48
HOXD3-202ENST00000410016 OVOL1O14753 267 aa12.03□□□□□ -0.48
HOXD3-202ENST00000410016 LAGE3Q14657 143 aa12.03□□□□□ -0.48
HOXD3-202ENST00000410016 PEF1Q9UBV8 284 aaKnown RBP12.03□□□□□ -0.48
HOXD3-202ENST00000410016 CFAP46Q8IYW2 2715 aa12.02□□□□□ -0.48
HOXD3-202ENST00000410016 SPG11Q96JI7 2443 aa12.02□□□□□ -0.49
HOXD3-202ENST00000410016 J3KRW8 73 aa12.02□□□□□ -0.49
HOXD3-202ENST00000410016 HSD52Q0P140 79 aa12.02□□□□□ -0.49
HOXD3-202ENST00000410016 PSMG4Q5JS54 123 aa12.02□□□□□ -0.49
HOXD3-202ENST00000410016 OR4X2Q8NGF9 303 aa12.02□□□□□ -0.49
HOXD3-202ENST00000410016 OR10J6PQ8NGY7 276 aa12.02□□□□□ -0.49
HOXD3-202ENST00000410016 IGLV1-40P01703 118 aa12.01□□□□□ -0.49
HOXD3-202ENST00000410016 LCNL1Q6ZST4 164 aa12.01□□□□□ -0.49
HOXD3-202ENST00000410016 FOXC2Q99958 501 aa12.01□□□□□ -0.49
HOXD3-202ENST00000410016 PKD1L2Q7Z442 2459 aa12.01□□□□□ -0.49
HOXD3-202ENST00000410016 TRAV21A0A0B4J279 112 aa12.01□□□□□ -0.49
HOXD3-202ENST00000410016 ATP5LO75964 103 aa12.01□□□□□ -0.49
HOXD3-202ENST00000410016 IGKCP01834 107 aa12.01□□□□□ -0.49
HOXD3-202ENST00000410016 OCIAD2Q56VL3 154 aa12.01□□□□□ -0.49
HOXD3-202ENST00000410016 MRAP2Q96G30 205 aa12.01□□□□□ -0.49
HOXD3-202ENST00000410016 SMPXQ9UHP9 88 aa12.01□□□□□ -0.49
HOXD3-202ENST00000410016 SPRY2O43597 315 aa12□□□□□ -0.49
HOXD3-202ENST00000410016 PF4V1P10720 104 aa12□□□□□ -0.49
HOXD3-202ENST00000410016 APRG1Q8IVJ8 170 aa12□□□□□ -0.49
HOXD3-202ENST00000410016 F6UB75 175 aa12□□□□□ -0.49
HOXD3-202ENST00000410016 SRSF1Q07955 248 aaKnown RBP eCLIP12□□□□□ -0.49
HOXD3-202ENST00000410016 KIR3DS1Q14943 382 aa12□□□□□ -0.49
HOXD3-202ENST00000410016 TMEM8BA6NDV4 472 aa11.99□□□□□ -0.49
HOXD3-202ENST00000410016 H3BRM9 83 aa11.99□□□□□ -0.49
HOXD3-202ENST00000410016 AVPP01185 164 aa11.99□□□□□ -0.49
HOXD3-202ENST00000410016 MSMBP08118 114 aa11.99□□□□□ -0.49
HOXD3-202ENST00000410016 ATP5J2P56134 94 aa11.99□□□□□ -0.49
HOXD3-202ENST00000410016 TM4SF20Q53R12 229 aa11.99□□□□□ -0.49
HOXD3-202ENST00000410016 RHPN1-AS1Q9BWJ2 59 aa11.99□□□□□ -0.49
HOXD3-202ENST00000410016 TTTY13Q9BZ97 58 aa11.99□□□□□ -0.49
HOXD3-202ENST00000410016 A6NDN8 102 aa11.99□□□□□ -0.49
HOXD3-202ENST00000410016 K7ERU9 68 aa11.99□□□□□ -0.49
HOXD3-202ENST00000410016 DPM2O94777 84 aa11.99□□□□□ -0.49
HOXD3-202ENST00000410016 CFHR3Q02985 330 aa11.99□□□□□ -0.49
HOXD3-202ENST00000410016 ANXA2RQ3ZCQ2 193 aa11.99□□□□□ -0.49
HOXD3-202ENST00000410016 MYOZ3Q8TDC0 251 aa11.99□□□□□ -0.49
HOXD3-202ENST00000410016 CLUHP3Q96NS8 147 aa11.99□□□□□ -0.49
HOXD3-202ENST00000410016 M0R381 172 aa11.98□□□□□ -0.49
HOXD3-202ENST00000410016 RPL11P62913 178 aaKnown RBP11.98□□□□□ -0.49
HOXD3-202ENST00000410016 C9orf118A6NHY6 69 aa11.98□□□□□ -0.49
HOXD3-202ENST00000410016 ZC2HC1BQ5TFG8 222 aa11.98□□□□□ -0.49
HOXD3-202ENST00000410016 RASL10AQ92737 203 aa11.98□□□□□ -0.49
HOXD3-202ENST00000410016 SMIM2Q9BVW6 85 aa11.98□□□□□ -0.49
HOXD3-202ENST00000410016 MRPL35Q9NZE8 188 aaKnown RBP11.98□□□□□ -0.49
HOXD3-202ENST00000410016 RNASE4P34096 147 aaKnown RBP11.97□□□□□ -0.49
HOXD3-202ENST00000410016 GTSCR1Q86UQ5 136 aa11.97□□□□□ -0.49
HOXD3-202ENST00000410016 CST9LQ9H4G1 147 aa11.97□□□□□ -0.49
HOXD3-202ENST00000410016 HIGD1BQ9P298 99 aa11.97□□□□□ -0.49
HOXD3-202ENST00000410016 IGKV3-7A0A075B6H7 116 aa11.97□□□□□ -0.49
HOXD3-202ENST00000410016 A0A0G2JLM5 398 aa11.97□□□□□ -0.49
HOXD3-202ENST00000410016 TRBV7-9A0A0J9YWB2 115 aa11.97□□□□□ -0.49
HOXD3-202ENST00000410016 ASIPP42127 132 aa11.97□□□□□ -0.49
HOXD3-202ENST00000410016 DAZ1Q9NQZ3 744 aaKnown RBP11.97□□□□□ -0.49
HOXD3-202ENST00000410016 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.96□□□□□ -0.49
HOXD3-202ENST00000410016 GNRH2O43555 120 aa11.96□□□□□ -0.49
HOXD3-202ENST00000410016 RNASE3P12724 160 aaKnown RBP11.96□□□□□ -0.49
HOXD3-202ENST00000410016 S100A4P26447 101 aaKnown RBP11.96□□□□□ -0.49
HOXD3-202ENST00000410016 C14orf178Q8N769 122 aaPredicted RBP11.96□□□□□ -0.49
HOXD3-202ENST00000410016 TMEM160Q9NX00 188 aa11.96□□□□□ -0.49
HOXD3-202ENST00000410016 FLNCQ14315 2725 aa11.96□□□□□ -0.5
HOXD3-202ENST00000410016 A0A087WX48 190 aa11.96□□□□□ -0.5
HOXD3-202ENST00000410016 MED14OSP0DP75 135 aa11.96□□□□□ -0.5
HOXD3-202ENST00000410016 EDN2P20800 178 aa11.96□□□□□ -0.5
HOXD3-202ENST00000410016 SUMO2P61956 95 aaKnown RBP11.96□□□□□ -0.5
HOXD3-202ENST00000410016 JMJD8Q96S16 334 aa11.96□□□□□ -0.5
HOXD3-202ENST00000410016 DPH3P1Q9H4G8 78 aa11.96□□□□□ -0.5
HOXD3-202ENST00000410016 PHLDA3Q9Y5J5 127 aa11.96□□□□□ -0.5
HOXD3-202ENST00000410016 SELENOKQ9Y6D0 94 aa11.96□□□□□ -0.5
HOXD3-202ENST00000410016 CSMD2Q7Z408 3487 aa11.95□□□□□ -0.5
HOXD3-202ENST00000410016 RNF223E7ERA6 249 aa11.95□□□□□ -0.5
HOXD3-202ENST00000410016 SCGB1A1P11684 91 aa11.95□□□□□ -0.5
HOXD3-202ENST00000410016 C20orf78Q9BR46 151 aa11.95□□□□□ -0.5
HOXD3-202ENST00000410016 TRBV25-1A0A075B6N4 114 aa11.94□□□□□ -0.5
HOXD3-202ENST00000410016 GAGE12BA1L429 117 aa11.94□□□□□ -0.5
HOXD3-202ENST00000410016 UFSP1Q6NVU6 142 aa11.94□□□□□ -0.5
HOXD3-202ENST00000410016 RPL39LQ96EH5 51 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms