RNA–Protein interactions for RNA: ENST00000409938.5

EPHA4-203, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EPHA4, Length 3,363 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-203ENST00000409938 VPS13CQ709C8 3753 aa5.94□□□□□ -1.46
EPHA4-203ENST00000409938 FAM223BA6NKX1 122 aa5.94□□□□□ -1.46
EPHA4-203ENST00000409938 M0R381 172 aa5.94□□□□□ -1.46
EPHA4-203ENST00000409938 TM4SF20Q53R12 229 aa5.94□□□□□ -1.46
EPHA4-203ENST00000409938 C9orf139Q6ZV77 190 aa5.94□□□□□ -1.46
EPHA4-203ENST00000409938 FAM223AQ8IWN6 122 aa5.94□□□□□ -1.46
EPHA4-203ENST00000409938 IGLL5B9A064 214 aa5.93□□□□□ -1.46
EPHA4-203ENST00000409938 F8VRH5 84 aa5.93□□□□□ -1.46
EPHA4-203ENST00000409938 IGF1P05019 195 aa5.93□□□□□ -1.46
EPHA4-203ENST00000409938 MYOZ3Q8TDC0 251 aa5.93□□□□□ -1.46
EPHA4-203ENST00000409938 H7C1H1 209 aa5.93□□□□□ -1.46
EPHA4-203ENST00000409938 NPFFO15130 113 aa5.93□□□□□ -1.46
EPHA4-203ENST00000409938 EFNA4P52798 201 aa5.93□□□□□ -1.46
EPHA4-203ENST00000409938 FOXI2Q6ZQN5 318 aa5.93□□□□□ -1.46
EPHA4-203ENST00000409938 LINC00477Q96M19 166 aa5.93□□□□□ -1.46
EPHA4-203ENST00000409938 TMEM160Q9NX00 188 aa5.93□□□□□ -1.46
EPHA4-203ENST00000409938 TRBV7-9A0A0J9YWB2 115 aa5.93□□□□□ -1.46
EPHA4-203ENST00000409938 PRO0461Q9UI25 63 aa5.93□□□□□ -1.46
EPHA4-203ENST00000409938 H3BVH4 76 aa5.92□□□□□ -1.46
EPHA4-203ENST00000409938 RPL32P62910 135 aaKnown RBP5.92□□□□□ -1.46
EPHA4-203ENST00000409938 ATP5G2Q06055 141 aa5.92□□□□□ -1.46
EPHA4-203ENST00000409938 KLRB1Q12918 225 aa5.92□□□□□ -1.46
EPHA4-203ENST00000409938 FOXC1Q12948 553 aa5.92□□□□□ -1.46
EPHA4-203ENST00000409938 C12orf74Q32Q52 190 aa5.92□□□□□ -1.46
EPHA4-203ENST00000409938 ORMDL2Q53FV1 153 aa5.92□□□□□ -1.46
EPHA4-203ENST00000409938 KIF25-AS1Q9Y6Z4 181 aa5.92□□□□□ -1.46
EPHA4-203ENST00000409938 PTPRQQ9UMZ3 2332 aa5.92□□□□□ -1.46
EPHA4-203ENST00000409938 RIF1Q5UIP0 2472 aaKnown RBP5.92□□□□□ -1.46
EPHA4-203ENST00000409938 IGHV3OR16-13A0A075B7E8 117 aa5.92□□□□□ -1.46
EPHA4-203ENST00000409938 IGHV3-74A0A0B4J1X5 117 aa5.92□□□□□ -1.46
EPHA4-203ENST00000409938 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.92□□□□□ -1.46
EPHA4-203ENST00000409938 COX6B1P14854 86 aa5.92□□□□□ -1.46
EPHA4-203ENST00000409938 LINC00315P59091 139 aa5.92□□□□□ -1.46
EPHA4-203ENST00000409938 SUMO2P61956 95 aaKnown RBP5.92□□□□□ -1.46
EPHA4-203ENST00000409938 ZNF207O43670 478 aaKnown RBP5.92□□□□□ -1.46
EPHA4-203ENST00000409938 RIPPLY3P57055 190 aa5.92□□□□□ -1.46
EPHA4-203ENST00000409938 SPANXN1Q5VSR9 72 aa5.92□□□□□ -1.46
EPHA4-203ENST00000409938 SPANXB1Q9NS25 103 aaPredicted RBP5.92□□□□□ -1.46
EPHA4-203ENST00000409938 NHP2Q9NX24 153 aaKnown RBP5.92□□□□□ -1.46
EPHA4-203ENST00000409938 SELENOKQ9Y6D0 94 aa5.92□□□□□ -1.46
EPHA4-203ENST00000409938 IGHV3-49A0A0A0MS15 119 aa5.91□□□□□ -1.46
EPHA4-203ENST00000409938 TRAV41A0A0B4J266 112 aa5.91□□□□□ -1.46
EPHA4-203ENST00000409938 MYMXA0A1B0GTQ4 84 aa5.91□□□□□ -1.46
EPHA4-203ENST00000409938 F8W1H4 67 aa5.91□□□□□ -1.46
EPHA4-203ENST00000409938 NDUFA4O00483 81 aa5.91□□□□□ -1.46
EPHA4-203ENST00000409938 OVOL1O14753 267 aa5.91□□□□□ -1.46
EPHA4-203ENST00000409938 UNQ9165/PRO28630Q6UXU0 137 aa5.91□□□□□ -1.46
EPHA4-203ENST00000409938 DPH3P1Q9H4G8 78 aa5.91□□□□□ -1.46
EPHA4-203ENST00000409938 MOB4Q9Y3A3 225 aa5.91□□□□□ -1.46
EPHA4-203ENST00000409938 UFC1Q9Y3C8 167 aa5.91□□□□□ -1.46
EPHA4-203ENST00000409938 CEP295Q9C0D2 2601 aa5.91□□□□□ -1.46
EPHA4-203ENST00000409938 ABCA2Q9BZC7 2435 aa5.91□□□□□ -1.46
EPHA4-203ENST00000409938 TEX48A0A1B0GUV7 120 aa5.91□□□□□ -1.46
EPHA4-203ENST00000409938 RNASE3P12724 160 aaKnown RBP5.91□□□□□ -1.46
EPHA4-203ENST00000409938 BAALCQ8WXS3 180 aa5.91□□□□□ -1.46
EPHA4-203ENST00000409938 C16orf92Q96LL3 132 aa5.91□□□□□ -1.46
EPHA4-203ENST00000409938 ABCA4P78363 2273 aa5.9□□□□□ -1.46
EPHA4-203ENST00000409938 TRAV21A0A0B4J279 112 aa5.9□□□□□ -1.46
EPHA4-203ENST00000409938 IGHV4OR15-8A0A075B7B6 117 aa5.9□□□□□ -1.46
EPHA4-203ENST00000409938 A0A087WW49 117 aa5.9□□□□□ -1.46
EPHA4-203ENST00000409938 TMEM238C9JI98 176 aa5.9□□□□□ -1.46
EPHA4-203ENST00000409938 H3BUA1 57 aa5.9□□□□□ -1.46
EPHA4-203ENST00000409938 TRBV12-3P01733 135 aa5.9□□□□□ -1.46
EPHA4-203ENST00000409938 CRYGDP07320 174 aa5.9□□□□□ -1.46
EPHA4-203ENST00000409938 LGALS1P09382 135 aaKnown RBP5.9□□□□□ -1.46
EPHA4-203ENST00000409938 RRN3P1Q2M238 152 aa5.9□□□□□ -1.46
EPHA4-203ENST00000409938 MORN3Q6PF18 240 aaPredicted RBP5.9□□□□□ -1.46
EPHA4-203ENST00000409938 RPL39LQ96EH5 51 aaKnown RBP5.9□□□□□ -1.46
EPHA4-203ENST00000409938 CHTOPQ9Y3Y2 248 aaKnown RBP5.9□□□□□ -1.46
EPHA4-203ENST00000409938 TSHBP01222 138 aa5.9□□□□□ -1.47
EPHA4-203ENST00000409938 CELSR1Q9NYQ6 3014 aa5.9□□□□□ -1.47
EPHA4-203ENST00000409938 MUC4Q99102 2169 aa5.9□□□□□ -1.47
EPHA4-203ENST00000409938 AGRNO00468 2067 aa5.89□□□□□ -1.47
EPHA4-203ENST00000409938 ARL3P36405 182 aa5.89□□□□□ -1.47
EPHA4-203ENST00000409938 ANXA2RQ3ZCQ2 193 aa5.89□□□□□ -1.47
EPHA4-203ENST00000409938 SCGB3A1Q96QR1 104 aa5.89□□□□□ -1.47
EPHA4-203ENST00000409938 SPOCK3Q9BQ16 436 aa5.89□□□□□ -1.47
EPHA4-203ENST00000409938 BPESC1Q9GZL8 116 aa5.89□□□□□ -1.47
EPHA4-203ENST00000409938 IGLV4-69A0A075B6H9 119 aa5.89□□□□□ -1.47
EPHA4-203ENST00000409938 KLLNB2CW77 178 aa5.89□□□□□ -1.47
EPHA4-203ENST00000409938 ZNF479Q96JC4 524 aa5.89□□□□□ -1.47
EPHA4-203ENST00000409938 SPTBN2O15020 2390 aa5.89□□□□□ -1.47
EPHA4-203ENST00000409938 IGIPA6NJ69 53 aa5.89□□□□□ -1.47
EPHA4-203ENST00000409938 ASIPP42127 132 aa5.89□□□□□ -1.47
EPHA4-203ENST00000409938 UBE2D1P51668 147 aa5.89□□□□□ -1.47
EPHA4-203ENST00000409938 UCNP55089 124 aa5.89□□□□□ -1.47
EPHA4-203ENST00000409938 LCNL1Q6ZST4 164 aa5.89□□□□□ -1.47
EPHA4-203ENST00000409938 TPRP12270 2363 aaKnown RBP5.89□□□□□ -1.47
EPHA4-203ENST00000409938 IGHV1-69DA0A0B4J2H0 117 aa5.88□□□□□ -1.47
EPHA4-203ENST00000409938 PRSS29PA6NIE9 313 aa5.88□□□□□ -1.47
EPHA4-203ENST00000409938 CFHR3Q02985 330 aa5.88□□□□□ -1.47
EPHA4-203ENST00000409938 WFDC2Q14508 124 aa5.88□□□□□ -1.47
EPHA4-203ENST00000409938 C2orf66Q6UXQ4 117 aa5.88□□□□□ -1.47
EPHA4-203ENST00000409938 TMEM219Q86XT9 240 aa5.88□□□□□ -1.47
EPHA4-203ENST00000409938 OR10J6PQ8NGY7 276 aa5.88□□□□□ -1.47
EPHA4-203ENST00000409938 PPP1R17O96001 155 aa5.88□□□□□ -1.47
EPHA4-203ENST00000409938 IGHV1-69P01742 117 aa5.88□□□□□ -1.47
EPHA4-203ENST00000409938 IGHG2P01859 326 aa5.88□□□□□ -1.47
EPHA4-203ENST00000409938 SCGB1A1P11684 91 aa5.88□□□□□ -1.47
EPHA4-203ENST00000409938 POLR2KP53803 58 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms