RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 C9JCJ5 164 aa12.93□□□□□ -0.34
PAX3-208ENST00000409828 CRIP1P50238 77 aa12.93□□□□□ -0.34
PAX3-208ENST00000409828 NANOS2P60321 138 aaKnown RBP12.93□□□□□ -0.34
PAX3-208ENST00000409828 ZNF415Q09FC8 603 aa12.93□□□□□ -0.34
PAX3-208ENST00000409828 NUPR2A6NF83 97 aa12.92□□□□□ -0.34
PAX3-208ENST00000409828 GNG4P50150 75 aa12.92□□□□□ -0.34
PAX3-208ENST00000409828 LGALS9BQ3B8N2 356 aa12.92□□□□□ -0.34
PAX3-208ENST00000409828 CENPWQ5EE01 88 aa12.92□□□□□ -0.34
PAX3-208ENST00000409828 C18orf15Q96N68 181 aa12.92□□□□□ -0.34
PAX3-208ENST00000409828 SPXQ9BT56 116 aa12.92□□□□□ -0.34
PAX3-208ENST00000409828 NOP10Q9NPE3 64 aaKnown RBP12.92□□□□□ -0.34
PAX3-208ENST00000409828 BIN3Q9NQY0 253 aa12.92□□□□□ -0.34
PAX3-208ENST00000409828 GSN-AS1Q9NRJ2 163 aa12.92□□□□□ -0.34
PAX3-208ENST00000409828 C11orf21Q9P2W6 132 aa12.92□□□□□ -0.34
PAX3-208ENST00000409828 TYMSP04818 313 aa12.91□□□□□ -0.34
PAX3-208ENST00000409828 IFITM2Q01629 132 aa12.91□□□□□ -0.34
PAX3-208ENST00000409828 CLLU1Q5K131 121 aa12.91□□□□□ -0.34
PAX3-208ENST00000409828 PCNPQ8WW12 178 aaKnown RBP12.91□□□□□ -0.34
PAX3-208ENST00000409828 NAGKQ9UJ70 344 aa12.91□□□□□ -0.34
PAX3-208ENST00000409828 TRBV20OR9-2A0A075B6H5 130 aa12.9□□□□□ -0.34
PAX3-208ENST00000409828 TRAV10A0A0B4J240 114 aa12.9□□□□□ -0.34
PAX3-208ENST00000409828 IGKV3D-20A0A0C4DH25 116 aa12.9□□□□□ -0.34
PAX3-208ENST00000409828 IGHV3-16A0A0C4DH30 117 aa12.9□□□□□ -0.34
PAX3-208ENST00000409828 SPINK4O60575 86 aa12.9□□□□□ -0.34
PAX3-208ENST00000409828 SH2D1AO60880 128 aa12.9□□□□□ -0.34
PAX3-208ENST00000409828 IGLV2-8P01709 118 aa12.9□□□□□ -0.34
PAX3-208ENST00000409828 DAD1P61803 113 aa12.9□□□□□ -0.34
PAX3-208ENST00000409828 LINC01559Q495D7 138 aa12.9□□□□□ -0.34
PAX3-208ENST00000409828 DNLZQ5SXM8 178 aa12.9□□□□□ -0.34
PAX3-208ENST00000409828 CASC10Q5T4H9 136 aa12.9□□□□□ -0.34
PAX3-208ENST00000409828 Q6ZTC4 211 aa12.9□□□□□ -0.34
PAX3-208ENST00000409828 PHLDA1Q8WV24 401 aaPredicted RBP12.9□□□□□ -0.34
PAX3-208ENST00000409828 PARLQ9H300 379 aa12.9□□□□□ -0.34
PAX3-208ENST00000409828 RAB19A4D1S5 217 aa12.89□□□□□ -0.35
PAX3-208ENST00000409828 GNRH2O43555 120 aa12.89□□□□□ -0.35
PAX3-208ENST00000409828 SRP19P09132 144 aaKnown RBP12.89□□□□□ -0.35
PAX3-208ENST00000409828 PEA15Q15121 130 aa12.89□□□□□ -0.35
PAX3-208ENST00000409828 CEMP1Q6PRD7 247 aaPredicted RBP12.89□□□□□ -0.35
PAX3-208ENST00000409828 NHLRC2Q8NBF2 726 aa12.89□□□□□ -0.35
PAX3-208ENST00000409828 MDFICQ9P1T7 246 aa12.89□□□□□ -0.35
PAX3-208ENST00000409828 TENM2Q9NT68 2774 aa12.89□□□□□ -0.35
PAX3-208ENST00000409828 MUC4Q99102 2169 aa12.88□□□□□ -0.35
PAX3-208ENST00000409828 ORM1P02763 201 aa12.88□□□□□ -0.35
PAX3-208ENST00000409828 CXCL1P09341 107 aa12.88□□□□□ -0.35
PAX3-208ENST00000409828 PTH2Q96A98 100 aa12.88□□□□□ -0.35
PAX3-208ENST00000409828 NDUFAF3Q9BU61 184 aa12.88□□□□□ -0.35
PAX3-208ENST00000409828 KLK5Q9Y337 293 aaPredicted RBP12.88□□□□□ -0.35
PAX3-208ENST00000409828 LY96Q9Y6Y9 160 aa12.88□□□□□ -0.35
PAX3-208ENST00000409828 B4DEV8 164 aa12.87□□□□□ -0.35
PAX3-208ENST00000409828 KRBOX1C9JBD0 128 aa12.87□□□□□ -0.35
PAX3-208ENST00000409828 RASL10AQ92737 203 aa12.87□□□□□ -0.35
PAX3-208ENST00000409828 DEFB130BP0DP73 79 aa12.86□□□□□ -0.35
PAX3-208ENST00000409828 DEFB130AP0DP74 79 aa12.86□□□□□ -0.35
PAX3-208ENST00000409828 TCTAP57738 103 aa12.86□□□□□ -0.35
PAX3-208ENST00000409828 FAM74A3Q4VXF1 159 aa12.86□□□□□ -0.35
PAX3-208ENST00000409828 FAM210BQ96KR6 192 aa12.86□□□□□ -0.35
PAX3-208ENST00000409828 C9orf85Q96MD7 179 aa12.86□□□□□ -0.35
PAX3-208ENST00000409828 DEFB131BA0A096LNP1 70 aa12.85□□□□□ -0.35
PAX3-208ENST00000409828 M0R2P5 195 aa12.85□□□□□ -0.35
PAX3-208ENST00000409828 ATP5G1P05496 136 aa12.85□□□□□ -0.35
PAX3-208ENST00000409828 PIK3CD-AS1Q5SR53 167 aa12.85□□□□□ -0.35
PAX3-208ENST00000409828 ZFAND6Q6FIF0 208 aa12.85□□□□□ -0.35
PAX3-208ENST00000409828 Q6ZTI0 123 aa12.85□□□□□ -0.35
PAX3-208ENST00000409828 IL36BQ9NZH7 164 aa12.85□□□□□ -0.35
PAX3-208ENST00000409828 DYNC2H1Q8NCM8 4307 aaKnown RBP12.84□□□□□ -0.35
PAX3-208ENST00000409828 TRGV1A0A0A0MS02 117 aa12.84□□□□□ -0.35
PAX3-208ENST00000409828 C19orf71A6NCJ1 209 aa12.84□□□□□ -0.35
PAX3-208ENST00000409828 RNASE3P12724 160 aaKnown RBP12.84□□□□□ -0.35
PAX3-208ENST00000409828 ASIPP42127 132 aa12.84□□□□□ -0.35
PAX3-208ENST00000409828 ZNF575Q86XF7 245 aa12.84□□□□□ -0.35
PAX3-208ENST00000409828 OCC1Q8TAD7 63 aa12.84□□□□□ -0.35
PAX3-208ENST00000409828 SMIM7Q9BQ49 75 aa12.84□□□□□ -0.35
PAX3-208ENST00000409828 STARD9Q9P2P6 4700 aa12.83□□□□□ -0.36
PAX3-208ENST00000409828 GAGE12BA1L429 117 aa12.83□□□□□ -0.36
PAX3-208ENST00000409828 ZNF727A8MUV8 499 aa12.83□□□□□ -0.36
PAX3-208ENST00000409828 GAGE7O76087 117 aa12.83□□□□□ -0.36
PAX3-208ENST00000409828 GAGE12FP0CL80 117 aa12.83□□□□□ -0.36
PAX3-208ENST00000409828 GAGE12GP0CL81 117 aa12.83□□□□□ -0.36
PAX3-208ENST00000409828 GAGE12IP0CL82 117 aa12.83□□□□□ -0.36
PAX3-208ENST00000409828 MED14OSP0DP75 135 aa12.83□□□□□ -0.36
PAX3-208ENST00000409828 MGST1P10620 155 aaKnown RBP12.83□□□□□ -0.36
PAX3-208ENST00000409828 S100A4P26447 101 aaKnown RBP12.83□□□□□ -0.36
PAX3-208ENST00000409828 PRR27Q6MZM9 219 aa12.83□□□□□ -0.36
PAX3-208ENST00000409828 DAZAP1Q96EP5 407 aaKnown RBP12.83□□□□□ -0.36
PAX3-208ENST00000409828 PGPEP1LA6NFU8 196 aa12.82□□□□□ -0.36
PAX3-208ENST00000409828 M0R036 132 aa12.82□□□□□ -0.36
PAX3-208ENST00000409828 TRGV2A0A075B6R0 118 aa12.81□□□□□ -0.36
PAX3-208ENST00000409828 C9JQL5 133 aa12.81□□□□□ -0.36
PAX3-208ENST00000409828 CEBPGP53567 150 aa12.81□□□□□ -0.36
PAX3-208ENST00000409828 RPS20P60866 119 aaKnown RBP12.81□□□□□ -0.36
PAX3-208ENST00000409828 SRSF3P84103 164 aaKnown RBP12.81□□□□□ -0.36
PAX3-208ENST00000409828 OR5I1Q13606 314 aa12.81□□□□□ -0.36
PAX3-208ENST00000409828 SCRT2Q9NQ03 307 aa12.81□□□□□ -0.36
PAX3-208ENST00000409828 CIDEAO60543 219 aa12.8□□□□□ -0.36
PAX3-208ENST00000409828 P01737 135 aa12.8□□□□□ -0.36
PAX3-208ENST00000409828 FAM231DQ6ZW35 169 aa12.8□□□□□ -0.36
PAX3-208ENST00000409828 SSBP4Q9BWG4 385 aaPredicted RBP12.8□□□□□ -0.36
PAX3-208ENST00000409828 MRPL16Q9NX20 251 aaKnown RBP12.8□□□□□ -0.36
PAX3-208ENST00000409828 NACAE9PAV3 2078 aa12.79□□□□□ -0.36
PAX3-208ENST00000409828 XKRY2A2RUG3 117 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms