RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.62□□□□□ -0.55
SCAMP4-202ENST00000409472 SERTM2A0A1B0GWG4 89 aa11.62□□□□□ -0.55
SCAMP4-202ENST00000409472 FAM223BA6NKX1 122 aa11.62□□□□□ -0.55
SCAMP4-202ENST00000409472 B4DSR2 109 aa11.62□□□□□ -0.55
SCAMP4-202ENST00000409472 FABP2P12104 132 aa11.62□□□□□ -0.55
SCAMP4-202ENST00000409472 Q6ZQT7 251 aa11.62□□□□□ -0.55
SCAMP4-202ENST00000409472 FAM223AQ8IWN6 122 aa11.62□□□□□ -0.55
SCAMP4-202ENST00000409472 U3KQE9 123 aa11.62□□□□□ -0.55
SCAMP4-202ENST00000409472 TEX48A0A1B0GUV7 120 aa11.61□□□□□ -0.55
SCAMP4-202ENST00000409472 CSN3P07498 182 aa11.61□□□□□ -0.55
SCAMP4-202ENST00000409472 KIR3DS1Q14943 382 aa11.61□□□□□ -0.55
SCAMP4-202ENST00000409472 COX8CQ7Z4L0 72 aa11.61□□□□□ -0.55
SCAMP4-202ENST00000409472 APCP25054 2843 aa11.61□□□□□ -0.55
SCAMP4-202ENST00000409472 IGHV4-59P01825 116 aa11.61□□□□□ -0.55
SCAMP4-202ENST00000409472 DEFB1P60022 68 aa11.61□□□□□ -0.55
SCAMP4-202ENST00000409472 MRAP2Q96G30 205 aa11.61□□□□□ -0.55
SCAMP4-202ENST00000409472 TENM4Q6N022 2769 aa11.61□□□□□ -0.55
SCAMP4-202ENST00000409472 EDN2P20800 178 aa11.6□□□□□ -0.55
SCAMP4-202ENST00000409472 PF4V1P10720 104 aa11.6□□□□□ -0.55
SCAMP4-202ENST00000409472 C10orf99Q6UWK7 81 aa11.6□□□□□ -0.55
SCAMP4-202ENST00000409472 DPF1Q92782 380 aa11.6□□□□□ -0.55
SCAMP4-202ENST00000409472 SPATA25Q9BR10 227 aa11.6□□□□□ -0.55
SCAMP4-202ENST00000409472 TSSC4Q9Y5U2 329 aaPredicted RBP11.6□□□□□ -0.55
SCAMP4-202ENST00000409472 DOPEY2Q9Y3R5 2298 aa11.59□□□□□ -0.55
SCAMP4-202ENST00000409472 RIGQ13278 110 aa11.59□□□□□ -0.55
SCAMP4-202ENST00000409472 DEFB112Q30KQ8 113 aa11.59□□□□□ -0.55
SCAMP4-202ENST00000409472 LINC01545Q5VT33 79 aa11.59□□□□□ -0.55
SCAMP4-202ENST00000409472 GPHB5Q86YW7 130 aa11.59□□□□□ -0.55
SCAMP4-202ENST00000409472 C20orf173Q96LM9 149 aa11.59□□□□□ -0.55
SCAMP4-202ENST00000409472 AGPAT4-IT1Q9H0P7 198 aa11.59□□□□□ -0.55
SCAMP4-202ENST00000409472 CR1P17927 2039 aa11.59□□□□□ -0.55
SCAMP4-202ENST00000409472 AMN1Q8IY45 258 aa11.59□□□□□ -0.55
SCAMP4-202ENST00000409472 GLMPQ8WWB7 406 aa11.59□□□□□ -0.55
SCAMP4-202ENST00000409472 NDFIP1Q9BT67 221 aa11.59□□□□□ -0.55
SCAMP4-202ENST00000409472 C11orf21Q9P2W6 132 aa11.59□□□□□ -0.55
SCAMP4-202ENST00000409472 GATD1Q8NB37 220 aa11.58□□□□□ -0.56
SCAMP4-202ENST00000409472 SLC50A1Q9BRV3 221 aa11.58□□□□□ -0.56
SCAMP4-202ENST00000409472 MSRB1Q9NZV6 116 aa11.58□□□□□ -0.56
SCAMP4-202ENST00000409472 CREBBPQ92793 2442 aa11.58□□□□□ -0.56
SCAMP4-202ENST00000409472 COX6B1P14854 86 aa11.57□□□□□ -0.56
SCAMP4-202ENST00000409472 FOXI2Q6ZQN5 318 aa11.57□□□□□ -0.56
SCAMP4-202ENST00000409472 OR9G4Q8NGQ1 327 aa11.57□□□□□ -0.56
SCAMP4-202ENST00000409472 ORM1P02763 201 aa11.57□□□□□ -0.56
SCAMP4-202ENST00000409472 RNF223E7ERA6 249 aa11.56□□□□□ -0.56
SCAMP4-202ENST00000409472 IGLC6P0CF74 106 aa11.56□□□□□ -0.56
SCAMP4-202ENST00000409472 FAM106AQ4KMX7 169 aa11.56□□□□□ -0.56
SCAMP4-202ENST00000409472 Q6AWC8 147 aa11.56□□□□□ -0.56
SCAMP4-202ENST00000409472 OR4X2Q8NGF9 303 aa11.56□□□□□ -0.56
SCAMP4-202ENST00000409472 TLN2Q9Y4G6 2542 aa11.56□□□□□ -0.56
SCAMP4-202ENST00000409472 IGKV3-7A0A075B6H7 116 aa11.56□□□□□ -0.56
SCAMP4-202ENST00000409472 D6R8Y8 96 aa11.56□□□□□ -0.56
SCAMP4-202ENST00000409472 SMKR1H3BMG3 65 aa11.56□□□□□ -0.56
SCAMP4-202ENST00000409472 SIVA1O15304 175 aa11.56□□□□□ -0.56
SCAMP4-202ENST00000409472 TGFAP01135 160 aa11.56□□□□□ -0.56
SCAMP4-202ENST00000409472 IGLV1-40P01703 118 aa11.56□□□□□ -0.56
SCAMP4-202ENST00000409472 CFHR3Q02985 330 aa11.56□□□□□ -0.56
SCAMP4-202ENST00000409472 FOXE3Q13461 319 aa11.56□□□□□ -0.56
SCAMP4-202ENST00000409472 PRR9Q5T870 116 aa11.56□□□□□ -0.56
SCAMP4-202ENST00000409472 RAB37Q96AX2 223 aa11.56□□□□□ -0.56
SCAMP4-202ENST00000409472 NAA38Q9BRA0 125 aaKnown RBP11.56□□□□□ -0.56
SCAMP4-202ENST00000409472 GEMIN7Q9H840 131 aaKnown RBP11.56□□□□□ -0.56
SCAMP4-202ENST00000409472 H0Y8G0 127 aa11.55□□□□□ -0.56
SCAMP4-202ENST00000409472 SLC25A16P16260 332 aa11.55□□□□□ -0.56
SCAMP4-202ENST00000409472 ZNF493Q6ZR52 646 aa11.55□□□□□ -0.56
SCAMP4-202ENST00000409472 LINC01356Q8N9X3 169 aa11.55□□□□□ -0.56
SCAMP4-202ENST00000409472 MCRIP2Q9BUT9 160 aaKnown RBP11.55□□□□□ -0.56
SCAMP4-202ENST00000409472 TIMM8BQ9Y5J9 83 aaPredicted RBP11.55□□□□□ -0.56
SCAMP4-202ENST00000409472 IGKV3D-20A0A0C4DH25 116 aa11.55□□□□□ -0.56
SCAMP4-202ENST00000409472 SNAI2O43623 268 aa11.55□□□□□ -0.56
SCAMP4-202ENST00000409472 LOXL1Q08397 574 aaPredicted RBP11.55□□□□□ -0.56
SCAMP4-202ENST00000409472 SAMD5Q5TGI4 173 aa11.55□□□□□ -0.56
SCAMP4-202ENST00000409472 C16orf92Q96LL3 132 aa11.55□□□□□ -0.56
SCAMP4-202ENST00000409472 NDUFA4O00483 81 aa11.54□□□□□ -0.56
SCAMP4-202ENST00000409472 GAS8-AS1O95177 125 aa11.54□□□□□ -0.56
SCAMP4-202ENST00000409472 NCR2O95944 276 aa11.54□□□□□ -0.56
SCAMP4-202ENST00000409472 TM4SF20Q53R12 229 aa11.54□□□□□ -0.56
SCAMP4-202ENST00000409472 RBAKDNA6NC62 111 aa11.54□□□□□ -0.56
SCAMP4-202ENST00000409472 J3KRW8 73 aa11.54□□□□□ -0.56
SCAMP4-202ENST00000409472 FGF6P10767 208 aa11.54□□□□□ -0.56
SCAMP4-202ENST00000409472 DSCR9P59020 149 aa11.54□□□□□ -0.56
SCAMP4-202ENST00000409472 TWIST1Q15672 202 aa11.54□□□□□ -0.56
SCAMP4-202ENST00000409472 FAM104BQ5XKR9 115 aa11.54□□□□□ -0.56
SCAMP4-202ENST00000409472 FBLL1A6NHQ2 334 aaKnown RBP11.53□□□□□ -0.56
SCAMP4-202ENST00000409472 FABP5P3A8MUU1 101 aa11.53□□□□□ -0.56
SCAMP4-202ENST00000409472 MRPL51Q4U2R6 128 aaKnown RBP11.53□□□□□ -0.56
SCAMP4-202ENST00000409472 ADAMTSL5Q6ZMM2 481 aa11.53□□□□□ -0.56
SCAMP4-202ENST00000409472 LOC389332A0A1B0GUA5 103 aa11.53□□□□□ -0.56
SCAMP4-202ENST00000409472 A0A1B0GW15 77 aa11.53□□□□□ -0.56
SCAMP4-202ENST00000409472 F8W1H4 67 aa11.53□□□□□ -0.56
SCAMP4-202ENST00000409472 SOCS3O14543 225 aa11.53□□□□□ -0.56
SCAMP4-202ENST00000409472 IFI27P40305 119 aaPredicted RBP11.53□□□□□ -0.56
SCAMP4-202ENST00000409472 BOD1L2Q8IYS8 172 aa11.53□□□□□ -0.56
SCAMP4-202ENST00000409472 USMG5Q96IX5 58 aa11.53□□□□□ -0.56
SCAMP4-202ENST00000409472 MRPL16Q9NX20 251 aaKnown RBP11.53□□□□□ -0.56
SCAMP4-202ENST00000409472 F6UB75 175 aa11.52□□□□□ -0.57
SCAMP4-202ENST00000409472 H3BUA1 57 aa11.52□□□□□ -0.57
SCAMP4-202ENST00000409472 SRD5A1P18405 259 aa11.52□□□□□ -0.57
SCAMP4-202ENST00000409472 FXYD7P58549 80 aa11.52□□□□□ -0.57
SCAMP4-202ENST00000409472 LINC01559Q495D7 138 aa11.52□□□□□ -0.57
SCAMP4-202ENST00000409472 TMEM78Q5T7P6 136 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms