RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 FOXC2Q99958 501 aa8.3□□□□□ -1.08
NIF3L1-204ENST00000409357 RASL11BQ9BPW5 248 aa8.3□□□□□ -1.08
NIF3L1-204ENST00000409357 TTTY13Q9BZ97 58 aa8.3□□□□□ -1.08
NIF3L1-204ENST00000409357 HIGD1AQ9Y241 93 aa8.3□□□□□ -1.08
NIF3L1-204ENST00000409357 C2CD3Q4AC94 2353 aa8.29□□□□□ -1.08
NIF3L1-204ENST00000409357 TRBV19A0A075B6N1 114 aa8.29□□□□□ -1.08
NIF3L1-204ENST00000409357 CNIH1O95406 144 aa8.29□□□□□ -1.08
NIF3L1-204ENST00000409357 PPIFP30405 207 aaKnown RBP8.29□□□□□ -1.08
NIF3L1-204ENST00000409357 RPL13AP40429 203 aaKnown RBP8.29□□□□□ -1.08
NIF3L1-204ENST00000409357 WT1-ASQ06250 92 aa8.29□□□□□ -1.08
NIF3L1-204ENST00000409357 PDE6HQ13956 83 aa8.29□□□□□ -1.08
NIF3L1-204ENST00000409357 EDDM3AQ14507 147 aa8.29□□□□□ -1.08
NIF3L1-204ENST00000409357 RNF185Q96GF1 192 aa8.29□□□□□ -1.08
NIF3L1-204ENST00000409357 VPREB3Q9UKI3 123 aa8.29□□□□□ -1.08
NIF3L1-204ENST00000409357 TMEM213A2RRL7 107 aa8.28□□□□□ -1.08
NIF3L1-204ENST00000409357 CGB1A6NKQ9 187 aa8.28□□□□□ -1.08
NIF3L1-204ENST00000409357 F8VRH5 84 aa8.28□□□□□ -1.08
NIF3L1-204ENST00000409357 CCDC179H3BU77 68 aa8.28□□□□□ -1.08
NIF3L1-204ENST00000409357 H7C1H1 209 aa8.28□□□□□ -1.08
NIF3L1-204ENST00000409357 K7EMI3 77 aa8.28□□□□□ -1.08
NIF3L1-204ENST00000409357 CD7P09564 240 aa8.28□□□□□ -1.08
NIF3L1-204ENST00000409357 ORM2P19652 201 aa8.28□□□□□ -1.08
NIF3L1-204ENST00000409357 CD40P25942 277 aa8.28□□□□□ -1.08
NIF3L1-204ENST00000409357 C5orf47Q569G3 176 aa8.28□□□□□ -1.08
NIF3L1-204ENST00000409357 MBNL2Q5VZF2 373 aaKnown RBP8.28□□□□□ -1.08
NIF3L1-204ENST00000409357 FLYWCH2Q96CP2 140 aaKnown RBP8.28□□□□□ -1.08
NIF3L1-204ENST00000409357 PLCE1Q9P212 2302 aa8.28□□□□□ -1.08
NIF3L1-204ENST00000409357 NSD1Q96L73 2696 aaPredicted RBP8.28□□□□□ -1.08
NIF3L1-204ENST00000409357 TRAV8-1A0A0A6YYK1 113 aa8.27□□□□□ -1.08
NIF3L1-204ENST00000409357 TRAV40A0A0B4J280 105 aa8.27□□□□□ -1.08
NIF3L1-204ENST00000409357 PSMB2P49721 201 aa8.27□□□□□ -1.08
NIF3L1-204ENST00000409357 TMEM78Q5T7P6 136 aa8.27□□□□□ -1.08
NIF3L1-204ENST00000409357 SIGLEC15Q6ZMC9 328 aa8.27□□□□□ -1.08
NIF3L1-204ENST00000409357 C8orf31Q8N9H6 132 aa8.27□□□□□ -1.08
NIF3L1-204ENST00000409357 RASL10AQ92737 203 aa8.27□□□□□ -1.08
NIF3L1-204ENST00000409357 MRPL35Q9NZE8 188 aaKnown RBP8.27□□□□□ -1.08
NIF3L1-204ENST00000409357 RPUSD1Q9UJJ7 312 aaKnown RBP8.27□□□□□ -1.08
NIF3L1-204ENST00000409357 PROCRQ9UNN8 238 aa8.27□□□□□ -1.08
NIF3L1-204ENST00000409357 RAI1Q7Z5J4 1906 aaPredicted RBP8.27□□□□□ -1.09
NIF3L1-204ENST00000409357 LINC01549A6NIU2 74 aa8.27□□□□□ -1.09
NIF3L1-204ENST00000409357 TNFRSF6BO95407 300 aa8.27□□□□□ -1.09
NIF3L1-204ENST00000409357 IGKV1-16P04430 117 aa8.27□□□□□ -1.09
NIF3L1-204ENST00000409357 SLC25A16P16260 332 aa8.27□□□□□ -1.09
NIF3L1-204ENST00000409357 ANKRD29Q8N6D5 301 aa8.27□□□□□ -1.09
NIF3L1-204ENST00000409357 PTH2Q96A98 100 aa8.27□□□□□ -1.09
NIF3L1-204ENST00000409357 DNAJC30Q96LL9 226 aa8.27□□□□□ -1.09
NIF3L1-204ENST00000409357 TMEM160Q9NX00 188 aa8.27□□□□□ -1.09
NIF3L1-204ENST00000409357 MRPL36Q9P0J6 103 aaKnown RBP8.27□□□□□ -1.09
NIF3L1-204ENST00000409357 FAM240AA0A1B0GVK7 77 aa8.26□□□□□ -1.09
NIF3L1-204ENST00000409357 PLAUP00749 431 aa8.26□□□□□ -1.09
NIF3L1-204ENST00000409357 LHBP01229 141 aa8.26□□□□□ -1.09
NIF3L1-204ENST00000409357 PF4P02776 101 aa8.26□□□□□ -1.09
NIF3L1-204ENST00000409357 LGALS1P09382 135 aaKnown RBP8.26□□□□□ -1.09
NIF3L1-204ENST00000409357 FAM169BQ8N8A8 192 aa8.26□□□□□ -1.09
NIF3L1-204ENST00000409357 NGBQ9NPG2 151 aa8.26□□□□□ -1.09
NIF3L1-204ENST00000409357 AGRNO00468 2067 aa8.26□□□□□ -1.09
NIF3L1-204ENST00000409357 DSCAMO60469 2012 aa8.25□□□□□ -1.09
NIF3L1-204ENST00000409357 TCL1BO95988 128 aa8.25□□□□□ -1.09
NIF3L1-204ENST00000409357 P0DMU3 169 aa8.25□□□□□ -1.09
NIF3L1-204ENST00000409357 FAM231AP0DMU4 169 aa8.25□□□□□ -1.09
NIF3L1-204ENST00000409357 FAM231CP0DMU5 169 aa8.25□□□□□ -1.09
NIF3L1-204ENST00000409357 NDUFA11Q86Y39 141 aa8.25□□□□□ -1.09
NIF3L1-204ENST00000409357 SHANK2-AS3Q9BTD1 123 aa8.25□□□□□ -1.09
NIF3L1-204ENST00000409357 IMUPQ9GZP8 106 aa8.25□□□□□ -1.09
NIF3L1-204ENST00000409357 SH2D1AO60880 128 aa8.24□□□□□ -1.09
NIF3L1-204ENST00000409357 IGKV3-15P01624 115 aa8.24□□□□□ -1.09
NIF3L1-204ENST00000409357 HLA-DMBP28068 263 aa8.24□□□□□ -1.09
NIF3L1-204ENST00000409357 LOXP28300 417 aaPredicted RBP8.24□□□□□ -1.09
NIF3L1-204ENST00000409357 LAGE3Q14657 143 aa8.24□□□□□ -1.09
NIF3L1-204ENST00000409357 ZNF672Q499Z4 452 aaPredicted RBP8.24□□□□□ -1.09
NIF3L1-204ENST00000409357 CXorf67Q86X51 503 aaPredicted RBP8.24□□□□□ -1.09
NIF3L1-204ENST00000409357 C10orf126Q8N4M7 172 aa8.24□□□□□ -1.09
NIF3L1-204ENST00000409357 C1orf162Q8NEQ5 155 aaPredicted RBP8.24□□□□□ -1.09
NIF3L1-204ENST00000409357 MRPL20Q9BYC9 149 aaKnown RBP8.24□□□□□ -1.09
NIF3L1-204ENST00000409357 NAV3Q8IVL0 2385 aa8.24□□□□□ -1.09
NIF3L1-204ENST00000409357 DSCAML1Q8TD84 2053 aa8.24□□□□□ -1.09
NIF3L1-204ENST00000409357 TRAV4A0A0B4J268 109 aa8.24□□□□□ -1.09
NIF3L1-204ENST00000409357 H3BRN7 92 aa8.24□□□□□ -1.09
NIF3L1-204ENST00000409357 MRPS12O15235 138 aaKnown RBP8.24□□□□□ -1.09
NIF3L1-204ENST00000409357 TIMM8AO60220 97 aaPredicted RBP8.24□□□□□ -1.09
NIF3L1-204ENST00000409357 PRTN3P24158 256 aa8.24□□□□□ -1.09
NIF3L1-204ENST00000409357 ZFP2Q6ZN57 461 aa8.24□□□□□ -1.09
NIF3L1-204ENST00000409357 EXOC3-AS1Q8N2X6 119 aa8.24□□□□□ -1.09
NIF3L1-204ENST00000409357 LINC00311Q8N616 119 aa8.24□□□□□ -1.09
NIF3L1-204ENST00000409357 LOC107984156A0A0G2JMH3 177 aa8.23□□□□□ -1.09
NIF3L1-204ENST00000409357 TRBV7-7A0A0K0K1E9 115 aa8.23□□□□□ -1.09
NIF3L1-204ENST00000409357 A0A1B0GX51 115 aa8.23□□□□□ -1.09
NIF3L1-204ENST00000409357 E7EUB6 86 aa8.23□□□□□ -1.09
NIF3L1-204ENST00000409357 SLC25A20O43772 301 aa8.23□□□□□ -1.09
NIF3L1-204ENST00000409357 IGLV2-23P01705 113 aa8.23□□□□□ -1.09
NIF3L1-204ENST00000409357 TFF1P04155 84 aa8.23□□□□□ -1.09
NIF3L1-204ENST00000409357 FXYD7P58549 80 aa8.23□□□□□ -1.09
NIF3L1-204ENST00000409357 RPS28P62857 69 aaKnown RBP8.23□□□□□ -1.09
NIF3L1-204ENST00000409357 MEIG1Q5JSS6 88 aa8.23□□□□□ -1.09
NIF3L1-204ENST00000409357 FAM159AQ6UWV7 190 aa8.23□□□□□ -1.09
NIF3L1-204ENST00000409357 IL17RELQ6ZVW7 336 aa8.23□□□□□ -1.09
NIF3L1-204ENST00000409357 ARL17AQ8IVW1 177 aa8.23□□□□□ -1.09
NIF3L1-204ENST00000409357 LRRC75A-AS1Q8N1F1 130 aa8.23□□□□□ -1.09
NIF3L1-204ENST00000409357 SRSF8Q9BRL6 282 aaKnown RBP8.23□□□□□ -1.09
NIF3L1-204ENST00000409357 SIGLEC9Q9Y336 463 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms