RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 WDR90Q96KV7 1748 aa10.2□□□□□ -0.78
RNF43-201ENST00000407977 J3KT08 172 aa10.2□□□□□ -0.78
RNF43-201ENST00000407977 LINC01620Q4KN68 170 aa10.2□□□□□ -0.78
RNF43-201ENST00000407977 WISP1O95388 367 aa10.2□□□□□ -0.78
RNF43-201ENST00000407977 DOCK10Q96BY6 2186 aa10.2□□□□□ -0.78
RNF43-201ENST00000407977 CADP27708 2225 aa10.2□□□□□ -0.78
RNF43-201ENST00000407977 F5H768 121 aa10.2□□□□□ -0.78
RNF43-201ENST00000407977 RUSC1-AS1Q66K80 236 aa10.2□□□□□ -0.78
RNF43-201ENST00000407977 IGFBPL1Q8WX77 278 aa10.2□□□□□ -0.78
RNF43-201ENST00000407977 NDUFC2O95298 119 aa10.19□□□□□ -0.78
RNF43-201ENST00000407977 NBL1P41271 181 aa10.19□□□□□ -0.78
RNF43-201ENST00000407977 LY6DQ14210 128 aa10.19□□□□□ -0.78
RNF43-201ENST00000407977 SMIM20Q8N5G0 67 aa10.19□□□□□ -0.78
RNF43-201ENST00000407977 RMI2Q96E14 147 aa10.19□□□□□ -0.78
RNF43-201ENST00000407977 XIRP1Q702N8 1843 aaKnown RBP10.19□□□□□ -0.78
RNF43-201ENST00000407977 ZSWIM8A7E2V4 1837 aa10.19□□□□□ -0.78
RNF43-201ENST00000407977 F6UB75 175 aa10.19□□□□□ -0.78
RNF43-201ENST00000407977 J3QLI3 93 aa10.19□□□□□ -0.78
RNF43-201ENST00000407977 TDRG1Q3Y452 100 aa10.19□□□□□ -0.78
RNF43-201ENST00000407977 C17orf77Q96MU5 243 aa10.19□□□□□ -0.78
RNF43-201ENST00000407977 FOXI1Q12951 378 aa10.19□□□□□ -0.78
RNF43-201ENST00000407977 RNF152Q8N8N0 203 aa10.19□□□□□ -0.78
RNF43-201ENST00000407977 ICOSQ9Y6W8 199 aa10.18□□□□□ -0.78
RNF43-201ENST00000407977 SPTAN1Q13813 2472 aaKnown RBP10.18□□□□□ -0.78
RNF43-201ENST00000407977 PLA2G2EQ9NZK7 142 aa10.18□□□□□ -0.78
RNF43-201ENST00000407977 H3BT86 120 aa10.18□□□□□ -0.78
RNF43-201ENST00000407977 LYPD6Q86Y78 171 aa10.18□□□□□ -0.78
RNF43-201ENST00000407977 A4D1N5 150 aa10.18□□□□□ -0.78
RNF43-201ENST00000407977 UNQ6494/PRO21346Q6UXR6 183 aa10.18□□□□□ -0.78
RNF43-201ENST00000407977 THADAQ6YHU6 1953 aa10.18□□□□□ -0.78
RNF43-201ENST00000407977 CRYGCP07315 174 aa10.17□□□□□ -0.78
RNF43-201ENST00000407977 G3V4G9 280 aa10.17□□□□□ -0.78
RNF43-201ENST00000407977 TRPM7Q96QT4 1865 aa10.17□□□□□ -0.78
RNF43-201ENST00000407977 FXYD2P54710 66 aa10.17□□□□□ -0.78
RNF43-201ENST00000407977 PKDREJQ9NTG1 2253 aa10.17□□□□□ -0.78
RNF43-201ENST00000407977 WFDC2Q14508 124 aa10.17□□□□□ -0.78
RNF43-201ENST00000407977 APOC4P55056 127 aa10.17□□□□□ -0.78
RNF43-201ENST00000407977 CFHR3Q02985 330 aa10.17□□□□□ -0.78
RNF43-201ENST00000407977 FOXE3Q13461 319 aa10.17□□□□□ -0.78
RNF43-201ENST00000407977 TRBV6-1A0A0K0K1D8 114 aa10.16□□□□□ -0.78
RNF43-201ENST00000407977 ATP5G1P05496 136 aa10.16□□□□□ -0.78
RNF43-201ENST00000407977 DIAPH2-AS1Q14236 149 aa10.16□□□□□ -0.78
RNF43-201ENST00000407977 ASPHD1Q5U4P2 390 aa10.16□□□□□ -0.78
RNF43-201ENST00000407977 LINC00173Q6ZV60 143 aa10.16□□□□□ -0.78
RNF43-201ENST00000407977 PLXNA4Q9HCM2 1894 aa10.16□□□□□ -0.78
RNF43-201ENST00000407977 E9PLD3 99 aa10.16□□□□□ -0.78
RNF43-201ENST00000407977 SPTBN2O15020 2390 aa10.16□□□□□ -0.78
RNF43-201ENST00000407977 ACACAQ13085 2346 aa10.16□□□□□ -0.78
RNF43-201ENST00000407977 GNRH2O43555 120 aa10.16□□□□□ -0.78
RNF43-201ENST00000407977 GNLYP22749 145 aa10.16□□□□□ -0.78
RNF43-201ENST00000407977 Q71RC1 249 aaPredicted RBP10.16□□□□□ -0.78
RNF43-201ENST00000407977 MUSTN1Q8IVN3 82 aa10.16□□□□□ -0.78
RNF43-201ENST00000407977 CACNA1GO43497 2377 aa10.16□□□□□ -0.78
RNF43-201ENST00000407977 ZFP2Q6ZN57 461 aa10.16□□□□□ -0.78
RNF43-201ENST00000407977 YLPM1P49750 1951 aaKnown RBP10.16□□□□□ -0.78
RNF43-201ENST00000407977 HEATR5AQ86XA9 2040 aa10.15□□□□□ -0.78
RNF43-201ENST00000407977 KRTAP27-1Q3LI81 207 aa10.15□□□□□ -0.78
RNF43-201ENST00000407977 C11orf53Q8IXP5 236 aa10.15□□□□□ -0.78
RNF43-201ENST00000407977 TRBV10-2A0A0K0K1G8 114 aa10.15□□□□□ -0.78
RNF43-201ENST00000407977 hADV29S1A0JD25 119 aa10.15□□□□□ -0.78
RNF43-201ENST00000407977 FUSP35637 526 aaKnown RBP eCLIP10.15□□□□□ -0.78
RNF43-201ENST00000407977 LTBP1Q14766 1721 aa10.15□□□□□ -0.78
RNF43-201ENST00000407977 A0A1B0GX51 115 aa10.15□□□□□ -0.79
RNF43-201ENST00000407977 I3L2K1 104 aa10.15□□□□□ -0.79
RNF43-201ENST00000407977 MED14OSP0DP75 135 aa10.15□□□□□ -0.79
RNF43-201ENST00000407977 TIMM17AQ99595 171 aa10.15□□□□□ -0.79
RNF43-201ENST00000407977 FAM236AA0A1B0GUQ0 79 aa10.14□□□□□ -0.79
RNF43-201ENST00000407977 FAM236BA0A1B0GV22 79 aa10.14□□□□□ -0.79
RNF43-201ENST00000407977 ANGP03950 147 aaKnown RBP10.14□□□□□ -0.79
RNF43-201ENST00000407977 GATA1P15976 413 aaPredicted RBP10.14□□□□□ -0.79
RNF43-201ENST00000407977 IGHG2P01859 326 aa10.14□□□□□ -0.79
RNF43-201ENST00000407977 SPATA12Q7Z6I5 190 aa10.14□□□□□ -0.79
RNF43-201ENST00000407977 JMJD7-PLA2G4BH0Y9G9 81 aa10.14□□□□□ -0.79
RNF43-201ENST00000407977 PIFOQ8TCI5 191 aa10.14□□□□□ -0.79
RNF43-201ENST00000407977 FAM167A-AS1Q96KT0 104 aa10.14□□□□□ -0.79
RNF43-201ENST00000407977 PATE2Q6UY27 113 aa10.14□□□□□ -0.79
RNF43-201ENST00000407977 IGKV1-17P01599 117 aa10.13□□□□□ -0.79
RNF43-201ENST00000407977 CTRLP40313 264 aa10.13□□□□□ -0.79
RNF43-201ENST00000407977 RNASE13Q5GAN3 156 aaKnown RBP10.13□□□□□ -0.79
RNF43-201ENST00000407977 NPBQ8NG41 125 aa10.13□□□□□ -0.79
RNF43-201ENST00000407977 SND1-IT1Q9HBX3 110 aa10.13□□□□□ -0.79
RNF43-201ENST00000407977 TCF20Q9UGU0 1960 aaKnown RBP10.13□□□□□ -0.79
RNF43-201ENST00000407977 OPRPNQ99935 248 aaPredicted RBP10.13□□□□□ -0.79
RNF43-201ENST00000407977 PSMB8P28062 276 aa10.13□□□□□ -0.79
RNF43-201ENST00000407977 RNF138Q8WVD3 245 aa10.13□□□□□ -0.79
RNF43-201ENST00000407977 GTSF1Q8WW33 167 aa10.13□□□□□ -0.79
RNF43-201ENST00000407977 TOMM6Q96B49 74 aa10.13□□□□□ -0.79
RNF43-201ENST00000407977 C1orf43Q9BWL3 253 aa10.13□□□□□ -0.79
RNF43-201ENST00000407977 VWA8A3KMH1 1905 aa10.12□□□□□ -0.79
RNF43-201ENST00000407977 DOCK8Q8NF50 2099 aa10.12□□□□□ -0.79
RNF43-201ENST00000407977 LHBP01229 141 aa10.12□□□□□ -0.79
RNF43-201ENST00000407977 U3KQE9 123 aa10.12□□□□□ -0.79
RNF43-201ENST00000407977 C11orf86A6NJI1 115 aa10.12□□□□□ -0.79
RNF43-201ENST00000407977 K7EIM0 57 aa10.12□□□□□ -0.79
RNF43-201ENST00000407977 NOTCH3Q9UM47 2321 aa10.12□□□□□ -0.79
RNF43-201ENST00000407977 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.12□□□□□ -0.79
RNF43-201ENST00000407977 A0A0J9YXV3 536 aa10.12□□□□□ -0.79
RNF43-201ENST00000407977 IGKV2-29A2NJV5 120 aaPredicted RBP10.12□□□□□ -0.79
RNF43-201ENST00000407977 LY6G6EA0A0G2JKS1 128 aa10.11□□□□□ -0.79
RNF43-201ENST00000407977 RPL39LQ96EH5 51 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms