RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.58□□□□□ -0.4
COL23A1-202ENST00000407622 UTP20O75691 2785 aaKnown RBP12.58□□□□□ -0.4
COL23A1-202ENST00000407622 SPANXN1Q5VSR9 72 aa12.57□□□□□ -0.4
COL23A1-202ENST00000407622 HHLA3Q9XRX5 114 aa12.57□□□□□ -0.4
COL23A1-202ENST00000407622 A1L4Q6 167 aa12.57□□□□□ -0.4
COL23A1-202ENST00000407622 PRSS1P07477 247 aa12.57□□□□□ -0.4
COL23A1-202ENST00000407622 RBX1P62877 108 aa12.57□□□□□ -0.4
COL23A1-202ENST00000407622 C9orf139Q6ZV77 190 aa12.57□□□□□ -0.4
COL23A1-202ENST00000407622 FOXC2Q99958 501 aa12.57□□□□□ -0.4
COL23A1-202ENST00000407622 ZMAT4Q9H898 229 aa12.57□□□□□ -0.4
COL23A1-202ENST00000407622 SOCS3O14543 225 aa12.56□□□□□ -0.4
COL23A1-202ENST00000407622 BLCAPP62952 87 aa12.56□□□□□ -0.4
COL23A1-202ENST00000407622 KIR3DS1Q14943 382 aa12.56□□□□□ -0.4
COL23A1-202ENST00000407622 ZFAND2AQ8N6M9 145 aa12.56□□□□□ -0.4
COL23A1-202ENST00000407622 IGKV3-7A0A075B6H7 116 aa12.56□□□□□ -0.4
COL23A1-202ENST00000407622 F6UB75 175 aa12.56□□□□□ -0.4
COL23A1-202ENST00000407622 H3BUX3 64 aa12.56□□□□□ -0.4
COL23A1-202ENST00000407622 SEC11AP67812 179 aa12.56□□□□□ -0.4
COL23A1-202ENST00000407622 MEGF9Q9H1U4 602 aa12.56□□□□□ -0.4
COL23A1-202ENST00000407622 CSPG4Q6UVK1 2322 aa12.56□□□□□ -0.4
COL23A1-202ENST00000407622 SMIM17P0DL12 118 aa12.55□□□□□ -0.4
COL23A1-202ENST00000407622 NAA38Q9BRA0 125 aaKnown RBP12.55□□□□□ -0.4
COL23A1-202ENST00000407622 PIMREGQ9BSJ6 248 aa12.55□□□□□ -0.4
COL23A1-202ENST00000407622 IGHV4-4A0A075B6R2 117 aa12.55□□□□□ -0.4
COL23A1-202ENST00000407622 NDUFA4O00483 81 aa12.55□□□□□ -0.4
COL23A1-202ENST00000407622 OR9G4Q8NGQ1 327 aa12.55□□□□□ -0.4
COL23A1-202ENST00000407622 KMT2BQ9UMN6 2715 aaPredicted RBP12.54□□□□□ -0.4
COL23A1-202ENST00000407622 EDN2P20800 178 aa12.54□□□□□ -0.4
COL23A1-202ENST00000407622 TM4SF20Q53R12 229 aa12.54□□□□□ -0.4
COL23A1-202ENST00000407622 SMIM15Q7Z3B0 74 aa12.54□□□□□ -0.4
COL23A1-202ENST00000407622 C10orf105Q8TEF2 133 aa12.54□□□□□ -0.4
COL23A1-202ENST00000407622 JMJD8Q96S16 334 aa12.54□□□□□ -0.4
COL23A1-202ENST00000407622 ATP6V0BQ99437 205 aa12.54□□□□□ -0.4
COL23A1-202ENST00000407622 IGHV4-30-2A0A087WSY4 118 aa12.54□□□□□ -0.4
COL23A1-202ENST00000407622 HSD52Q0P140 79 aa12.54□□□□□ -0.4
COL23A1-202ENST00000407622 PEF1Q9UBV8 284 aaKnown RBP12.54□□□□□ -0.4
COL23A1-202ENST00000407622 M0R381 172 aa12.53□□□□□ -0.4
COL23A1-202ENST00000407622 IGHG2P01859 326 aa12.53□□□□□ -0.4
COL23A1-202ENST00000407622 PF4V1P10720 104 aa12.53□□□□□ -0.4
COL23A1-202ENST00000407622 RPL11P62913 178 aaKnown RBP12.53□□□□□ -0.4
COL23A1-202ENST00000407622 GTSCR1Q86UQ5 136 aa12.53□□□□□ -0.4
COL23A1-202ENST00000407622 CCL19Q99731 98 aa12.53□□□□□ -0.4
COL23A1-202ENST00000407622 CHD6Q8TD26 2715 aa12.53□□□□□ -0.4
COL23A1-202ENST00000407622 IGKCP01834 107 aa12.53□□□□□ -0.4
COL23A1-202ENST00000407622 LAGE3Q14657 143 aa12.53□□□□□ -0.4
COL23A1-202ENST00000407622 A6NDX4 124 aa12.52□□□□□ -0.41
COL23A1-202ENST00000407622 PRSS47A8MTI9 375 aa12.52□□□□□ -0.41
COL23A1-202ENST00000407622 SIVA1O15304 175 aa12.52□□□□□ -0.41
COL23A1-202ENST00000407622 OR4X2Q8NGF9 303 aa12.52□□□□□ -0.41
COL23A1-202ENST00000407622 SRD5A1P18405 259 aa12.51□□□□□ -0.41
COL23A1-202ENST00000407622 OR10J6PQ8NGY7 276 aa12.51□□□□□ -0.41
COL23A1-202ENST00000407622 LINC00477Q96M19 166 aa12.51□□□□□ -0.41
COL23A1-202ENST00000407622 MRPL35Q9NZE8 188 aaKnown RBP12.51□□□□□ -0.41
COL23A1-202ENST00000407622 ANXA2RQ3ZCQ2 193 aa12.51□□□□□ -0.41
COL23A1-202ENST00000407622 ZC2HC1BQ5TFG8 222 aa12.51□□□□□ -0.41
COL23A1-202ENST00000407622 LENEPQ9Y5L5 61 aa12.51□□□□□ -0.41
COL23A1-202ENST00000407622 LRRK2Q5S007 2527 aa12.51□□□□□ -0.41
COL23A1-202ENST00000407622 AVPP01185 164 aa12.5□□□□□ -0.41
COL23A1-202ENST00000407622 RNASE4P34096 147 aaKnown RBP12.5□□□□□ -0.41
COL23A1-202ENST00000407622 CDKN1BP46527 198 aa12.5□□□□□ -0.41
COL23A1-202ENST00000407622 RAB37Q96AX2 223 aa12.5□□□□□ -0.41
COL23A1-202ENST00000407622 TMEM160Q9NX00 188 aa12.5□□□□□ -0.41
COL23A1-202ENST00000407622 DPM2O94777 84 aa12.5□□□□□ -0.41
COL23A1-202ENST00000407622 TMEM95Q3KNT9 176 aa12.5□□□□□ -0.41
COL23A1-202ENST00000407622 RPL39LQ96EH5 51 aaKnown RBP12.5□□□□□ -0.41
COL23A1-202ENST00000407622 TRAV21A0A0B4J279 112 aa12.49□□□□□ -0.41
COL23A1-202ENST00000407622 A6NDN8 102 aa12.49□□□□□ -0.41
COL23A1-202ENST00000407622 C9orf118A6NHY6 69 aa12.49□□□□□ -0.41
COL23A1-202ENST00000407622 H3BRM9 83 aa12.49□□□□□ -0.41
COL23A1-202ENST00000407622 H3BUT2 72 aa12.49□□□□□ -0.41
COL23A1-202ENST00000407622 OVOL1O14753 267 aa12.49□□□□□ -0.41
COL23A1-202ENST00000407622 GNRH2O43555 120 aa12.49□□□□□ -0.41
COL23A1-202ENST00000407622 COX6B1P14854 86 aa12.49□□□□□ -0.41
COL23A1-202ENST00000407622 ATP5J2P56134 94 aa12.49□□□□□ -0.41
COL23A1-202ENST00000407622 C14orf178Q8N769 122 aaPredicted RBP12.49□□□□□ -0.41
COL23A1-202ENST00000407622 RASL10AQ92737 203 aa12.49□□□□□ -0.41
COL23A1-202ENST00000407622 USMG5Q96IX5 58 aa12.49□□□□□ -0.41
COL23A1-202ENST00000407622 FAM19A4Q96LR4 140 aa12.49□□□□□ -0.41
COL23A1-202ENST00000407622 MUC4Q99102 2169 aa12.49□□□□□ -0.41
COL23A1-202ENST00000407622 RHPN1-AS1Q9BWJ2 59 aa12.49□□□□□ -0.41
COL23A1-202ENST00000407622 ATP5LO75964 103 aa12.49□□□□□ -0.41
COL23A1-202ENST00000407622 COTL1Q14019 142 aa12.49□□□□□ -0.41
COL23A1-202ENST00000407622 SMIM2Q9BVW6 85 aa12.49□□□□□ -0.41
COL23A1-202ENST00000407622 CST9LQ9H4G1 147 aa12.49□□□□□ -0.41
COL23A1-202ENST00000407622 FAM208BQ5VWN6 2430 aa12.48□□□□□ -0.41
COL23A1-202ENST00000407622 ZANQ9Y493 2812 aa12.48□□□□□ -0.41
COL23A1-202ENST00000407622 S100A4P26447 101 aaKnown RBP12.48□□□□□ -0.41
COL23A1-202ENST00000407622 MYOZ3Q8TDC0 251 aa12.48□□□□□ -0.41
COL23A1-202ENST00000407622 MRAP2Q96G30 205 aa12.48□□□□□ -0.41
COL23A1-202ENST00000407622 CLEC2AQ6UVW9 174 aa12.48□□□□□ -0.41
COL23A1-202ENST00000407622 GAGE12BA1L429 117 aa12.47□□□□□ -0.41
COL23A1-202ENST00000407622 IGLV1-40P01703 118 aa12.47□□□□□ -0.41
COL23A1-202ENST00000407622 ASIPP42127 132 aa12.47□□□□□ -0.41
COL23A1-202ENST00000407622 FXYD2P54710 66 aa12.47□□□□□ -0.41
COL23A1-202ENST00000407622 RNF223E7ERA6 249 aa12.46□□□□□ -0.41
COL23A1-202ENST00000407622 H3BUA1 57 aa12.46□□□□□ -0.41
COL23A1-202ENST00000407622 MSMBP08118 114 aa12.46□□□□□ -0.41
COL23A1-202ENST00000407622 RNASE3P12724 160 aaKnown RBP12.46□□□□□ -0.41
COL23A1-202ENST00000407622 RNF151Q2KHN1 245 aa12.46□□□□□ -0.41
COL23A1-202ENST00000407622 WFDC12Q8WWY7 111 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms