RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 VSIG2Q96IQ7 327 aa4.01□□□□□ -1.77
HMGB1P20-201ENST00000402555 ARPC5LQ9BPX5 153 aa4.01□□□□□ -1.77
HMGB1P20-201ENST00000402555 PSMG3Q9BT73 122 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P20-201ENST00000402555 MDFICQ9P1T7 246 aa4.01□□□□□ -1.77
HMGB1P20-201ENST00000402555 NAGKQ9UJ70 344 aa4.01□□□□□ -1.77
HMGB1P20-201ENST00000402555 LINC00588Q9Y4M8 146 aa4.01□□□□□ -1.77
HMGB1P20-201ENST00000402555 DNAH11Q96DT5 4516 aa4□□□□□ -1.77
HMGB1P20-201ENST00000402555 KIAA1109Q2LD37 5005 aa4□□□□□ -1.77
HMGB1P20-201ENST00000402555 PKD1P98161 4303 aa4□□□□□ -1.77
HMGB1P20-201ENST00000402555 BORCS7-ASMTA0A0B4J1R7 106 aa4□□□□□ -1.77
HMGB1P20-201ENST00000402555 TRBV7-9A0A0J9YWB2 115 aa4□□□□□ -1.77
HMGB1P20-201ENST00000402555 A0A1B0GVY2 172 aa4□□□□□ -1.77
HMGB1P20-201ENST00000402555 PRSS29PA6NIE9 313 aa4□□□□□ -1.77
HMGB1P20-201ENST00000402555 GGTLC3B5MD39 225 aa4□□□□□ -1.77
HMGB1P20-201ENST00000402555 FGF8P55075 233 aaPredicted RBP4□□□□□ -1.77
HMGB1P20-201ENST00000402555 CCL18P55774 89 aa4□□□□□ -1.77
HMGB1P20-201ENST00000402555 SERF2P84101 59 aa4□□□□□ -1.77
HMGB1P20-201ENST00000402555 ZNF415Q09FC8 603 aa4□□□□□ -1.77
HMGB1P20-201ENST00000402555 IBA57Q5T440 356 aaKnown RBP4□□□□□ -1.77
HMGB1P20-201ENST00000402555 Q6AWC8 147 aa4□□□□□ -1.77
HMGB1P20-201ENST00000402555 ZNRF2Q8NHG8 242 aa4□□□□□ -1.77
HMGB1P20-201ENST00000402555 ASB13Q8WXK3 278 aa4□□□□□ -1.77
HMGB1P20-201ENST00000402555 ST6GAL2Q96JF0 529 aa4□□□□□ -1.77
HMGB1P20-201ENST00000402555 C8orf49Q96NF6 230 aa4□□□□□ -1.77
HMGB1P20-201ENST00000402555 KRTAP17-1Q9BYP8 105 aa4□□□□□ -1.77
HMGB1P20-201ENST00000402555 ACTR3CQ9C0K3 210 aaPredicted RBP4□□□□□ -1.77
HMGB1P20-201ENST00000402555 CYTL1Q9NRR1 136 aa4□□□□□ -1.77
HMGB1P20-201ENST00000402555 DYNC1H1Q14204 4646 aaKnown RBP3.99□□□□□ -1.77
HMGB1P20-201ENST00000402555 A0A096LPF7 62 aa3.99□□□□□ -1.77
HMGB1P20-201ENST00000402555 TRAV34A0A0B4J273 112 aa3.99□□□□□ -1.77
HMGB1P20-201ENST00000402555 NBDYA0A0U1RRE5 68 aa3.99□□□□□ -1.77
HMGB1P20-201ENST00000402555 GNRH2O43555 120 aa3.99□□□□□ -1.77
HMGB1P20-201ENST00000402555 CXorf1O96002 111 aa3.99□□□□□ -1.77
HMGB1P20-201ENST00000402555 MBP02144 154 aa3.99□□□□□ -1.77
HMGB1P20-201ENST00000402555 TCRAP04437 139 aa3.99□□□□□ -1.77
HMGB1P20-201ENST00000402555 SFTA3P0C7M3 94 aa3.99□□□□□ -1.77
HMGB1P20-201ENST00000402555 ZNF80P51504 273 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P20-201ENST00000402555 UBE2G2P60604 165 aa3.99□□□□□ -1.77
HMGB1P20-201ENST00000402555 SUMO1P63165 101 aaKnown RBP3.99□□□□□ -1.77
HMGB1P20-201ENST00000402555 ESRGQ1W209 222 aa3.99□□□□□ -1.77
HMGB1P20-201ENST00000402555 FAM159AQ6UWV7 190 aa3.99□□□□□ -1.77
HMGB1P20-201ENST00000402555 LINC00336Q6ZUF6 198 aa3.99□□□□□ -1.77
HMGB1P20-201ENST00000402555 C5orf17Q8NAS9 161 aa3.99□□□□□ -1.77
HMGB1P20-201ENST00000402555 SUN5Q8TC36 379 aa3.99□□□□□ -1.77
HMGB1P20-201ENST00000402555 TMED6Q8WW62 240 aa3.99□□□□□ -1.77
HMGB1P20-201ENST00000402555 ZNF479Q96JC4 524 aa3.99□□□□□ -1.77
HMGB1P20-201ENST00000402555 C18orf15Q96N68 181 aa3.99□□□□□ -1.77
HMGB1P20-201ENST00000402555 TREM1Q9NP99 234 aa3.99□□□□□ -1.77
HMGB1P20-201ENST00000402555 C11orf21Q9P2W6 132 aa3.99□□□□□ -1.77
HMGB1P20-201ENST00000402555 PSG8Q9UQ74 426 aa3.99□□□□□ -1.77
HMGB1P20-201ENST00000402555 LENEPQ9Y5L5 61 aa3.99□□□□□ -1.77
HMGB1P20-201ENST00000402555 TRGV11A0A075B6L2 103 aa3.98□□□□□ -1.77
HMGB1P20-201ENST00000402555 TRAV21A0A0B4J279 112 aa3.98□□□□□ -1.77
HMGB1P20-201ENST00000402555 IGHV3-16A0A0C4DH30 117 aa3.98□□□□□ -1.77
HMGB1P20-201ENST00000402555 CTXND1A0A1B0GTU2 59 aa3.98□□□□□ -1.77
HMGB1P20-201ENST00000402555 IGLV2-11P01706 119 aa3.98□□□□□ -1.77
HMGB1P20-201ENST00000402555 TYMSP04818 313 aa3.98□□□□□ -1.77
HMGB1P20-201ENST00000402555 FHITP49789 147 aa3.98□□□□□ -1.77
HMGB1P20-201ENST00000402555 FAM3BP58499 235 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P20-201ENST00000402555 FLI1Q01543 452 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P20-201ENST00000402555 FHL2Q14192 279 aa3.98□□□□□ -1.77
HMGB1P20-201ENST00000402555 AKR1C8PQ5T2L2 129 aa3.98□□□□□ -1.77
HMGB1P20-201ENST00000402555 C1orf134Q5TEV5 83 aa3.98□□□□□ -1.77
HMGB1P20-201ENST00000402555 PRNTQ86SH4 94 aa3.98□□□□□ -1.77
HMGB1P20-201ENST00000402555 ARL6IP6Q8N6S5 226 aa3.98□□□□□ -1.77
HMGB1P20-201ENST00000402555 TMEM75Q8N9X5 138 aa3.98□□□□□ -1.77
HMGB1P20-201ENST00000402555 OR11H4Q8NGC9 324 aa3.98□□□□□ -1.77
HMGB1P20-201ENST00000402555 LINC00479Q96M42 142 aa3.98□□□□□ -1.77
HMGB1P20-201ENST00000402555 KRTAP1-5Q9BYS1 174 aa3.98□□□□□ -1.77
HMGB1P20-201ENST00000402555 Q9H8V8 135 aa3.98□□□□□ -1.77
HMGB1P20-201ENST00000402555 TMEM167BQ9NRX6 74 aa3.98□□□□□ -1.77
HMGB1P20-201ENST00000402555 EPDR1Q9UM22 224 aa3.98□□□□□ -1.77
HMGB1P20-201ENST00000402555 TRGV4A0A0C4DH28 118 aa3.97□□□□□ -1.77
HMGB1P20-201ENST00000402555 A0A1B0GV50 99 aa3.97□□□□□ -1.77
HMGB1P20-201ENST00000402555 A0A1W2PRE2 83 aa3.97□□□□□ -1.77
HMGB1P20-201ENST00000402555 MAP1LC3B2A6NCE7 125 aa3.97□□□□□ -1.77
HMGB1P20-201ENST00000402555 H3BNG1 76 aa3.97□□□□□ -1.77
HMGB1P20-201ENST00000402555 K7EQM0 130 aa3.97□□□□□ -1.77
HMGB1P20-201ENST00000402555 TAAR5O14804 337 aa3.97□□□□□ -1.77
HMGB1P20-201ENST00000402555 GCGP01275 180 aa3.97□□□□□ -1.77
HMGB1P20-201ENST00000402555 IFNA7P01567 189 aa3.97□□□□□ -1.77
HMGB1P20-201ENST00000402555 CRYBA4P53673 196 aa3.97□□□□□ -1.77
HMGB1P20-201ENST00000402555 TDRG1Q3Y452 100 aa3.97□□□□□ -1.77
HMGB1P20-201ENST00000402555 C6orf223Q8N319 242 aa3.97□□□□□ -1.77
HMGB1P20-201ENST00000402555 KCNRGQ8N5I3 272 aa3.97□□□□□ -1.77
HMGB1P20-201ENST00000402555 CYB561D1Q8N8Q1 229 aa3.97□□□□□ -1.77
HMGB1P20-201ENST00000402555 SPXQ9BT56 116 aa3.97□□□□□ -1.77
HMGB1P20-201ENST00000402555 NDFIP1Q9BT67 221 aa3.97□□□□□ -1.77
HMGB1P20-201ENST00000402555 KRTAP3-1Q9BYR8 98 aa3.97□□□□□ -1.77
HMGB1P20-201ENST00000402555 MAP1LC3BQ9GZQ8 125 aa3.97□□□□□ -1.77
HMGB1P20-201ENST00000402555 SDF2L1Q9HCN8 221 aa3.97□□□□□ -1.77
HMGB1P20-201ENST00000402555 PRO0255Q9UI72 69 aa3.97□□□□□ -1.77
HMGB1P20-201ENST00000402555 HHLA3Q9XRX5 114 aa3.97□□□□□ -1.77
HMGB1P20-201ENST00000402555 MRPS16Q9Y3D3 137 aaKnown RBP3.97□□□□□ -1.77
HMGB1P20-201ENST00000402555 ICOSQ9Y6W8 199 aa3.97□□□□□ -1.77
HMGB1P20-201ENST00000402555 LOC100131303A0A0U1RQF7 123 aa3.96□□□□□ -1.78
HMGB1P20-201ENST00000402555 SERTM2A0A1B0GWG4 89 aa3.96□□□□□ -1.78
HMGB1P20-201ENST00000402555 FAM74A7A6NL05 159 aa3.96□□□□□ -1.78
HMGB1P20-201ENST00000402555 C9JCJ5 164 aa3.96□□□□□ -1.78
HMGB1P20-201ENST00000402555 M0R2P5 195 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms